RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 LRP1Q07954 4544 aaKnown RBP5.77□□□□□ -1.49
CPEB1-215ENST00000617958 FLG2Q5D862 2391 aaPredicted RBP5.77□□□□□ -1.49
CPEB1-215ENST00000617958 RYR1P21817 5038 aa5.77□□□□□ -1.49
CPEB1-215ENST00000617958 RPL37P61927 97 aaKnown RBP5.77□□□□□ -1.49
CPEB1-215ENST00000617958 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
CPEB1-215ENST00000617958 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
CPEB1-215ENST00000617958 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
CPEB1-215ENST00000617958 MYCBP2O75592 4640 aa5.74□□□□□ -1.49
CPEB1-215ENST00000617958 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.5
CPEB1-215ENST00000617958 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
CPEB1-215ENST00000617958 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
CPEB1-215ENST00000617958 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
CPEB1-215ENST00000617958 ABCA13Q86UQ4 5058 aa5.63□□□□□ -1.51
CPEB1-215ENST00000617958 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
CPEB1-215ENST00000617958 KRTAP10-4P60372 401 aaPredicted RBP5.61□□□□□ -1.51
CPEB1-215ENST00000617958 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
CPEB1-215ENST00000617958 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
CPEB1-215ENST00000617958 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
CPEB1-215ENST00000617958 DMBT1Q9UGM3 2413 aaPredicted RBP5.58□□□□□ -1.52
CPEB1-215ENST00000617958 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
CPEB1-215ENST00000617958 Q5VSD8 79 aa5.57□□□□□ -1.52
CPEB1-215ENST00000617958 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
CPEB1-215ENST00000617958 HERC2O95714 4834 aa5.55□□□□□ -1.52
CPEB1-215ENST00000617958 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
CPEB1-215ENST00000617958 S4R3F8 94 aa5.54□□□□□ -1.52
CPEB1-215ENST00000617958 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
CPEB1-215ENST00000617958 A0A0D9SG42 100 aa5.52□□□□□ -1.53
CPEB1-215ENST00000617958 TNXBP22105 4242 aa5.52□□□□□ -1.53
CPEB1-215ENST00000617958 XP32Q5T750 250 aa5.51□□□□□ -1.53
CPEB1-215ENST00000617958 KRTAP3-3Q9BYR6 98 aa5.5□□□□□ -1.53
CPEB1-215ENST00000617958 C9orf92A6NGG3 77 aa5.46□□□□□ -1.53
CPEB1-215ENST00000617958 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
CPEB1-215ENST00000617958 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
CPEB1-215ENST00000617958 HERC1Q15751 4861 aa5.43□□□□□ -1.54
CPEB1-215ENST00000617958 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
CPEB1-215ENST00000617958 LPAP08519 4548 aa5.4□□□□□ -1.54
CPEB1-215ENST00000617958 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
CPEB1-215ENST00000617958 M0QZ58 72 aa5.33□□□□□ -1.56
CPEB1-215ENST00000617958 LRP2P98164 4655 aa5.33□□□□□ -1.56
CPEB1-215ENST00000617958 KRTAP10-8P60410 259 aa5.33□□□□□ -1.56
CPEB1-215ENST00000617958 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
CPEB1-215ENST00000617958 J3QL48 77 aa5.24□□□□□ -1.57
CPEB1-215ENST00000617958 MUC2Q02817 5179 aa5.23□□□□□ -1.57
CPEB1-215ENST00000617958 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
CPEB1-215ENST00000617958 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
CPEB1-215ENST00000617958 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
CPEB1-215ENST00000617958 RNF213Q63HN8 5207 aa5.15□□□□□ -1.59
CPEB1-215ENST00000617958 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
CPEB1-215ENST00000617958 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
CPEB1-215ENST00000617958 R4GN34 69 aa5□□□□□ -1.61
CPEB1-215ENST00000617958 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
CPEB1-215ENST00000617958 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
CPEB1-215ENST00000617958 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
CPEB1-215ENST00000617958 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
CPEB1-215ENST00000617958 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
CPEB1-215ENST00000617958 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
CPEB1-215ENST00000617958 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
CPEB1-215ENST00000617958 INE1O15225 51 aa4.77□□□□□ -1.65
CPEB1-215ENST00000617958 TNP1P09430 55 aa4.73□□□□□ -1.65
CPEB1-215ENST00000617958 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
CPEB1-215ENST00000617958 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
CPEB1-215ENST00000617958 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
CPEB1-215ENST00000617958 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
CPEB1-215ENST00000617958 MT1HP80294 61 aa4.52□□□□□ -1.69
CPEB1-215ENST00000617958 M0R2T5 61 aa4.49□□□□□ -1.69
CPEB1-215ENST00000617958 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
CPEB1-215ENST00000617958 USH2AO75445 5202 aa4.44□□□□□ -1.7
CPEB1-215ENST00000617958 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
CPEB1-215ENST00000617958 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
CPEB1-215ENST00000617958 MT1FP04733 61 aa4.35□□□□□ -1.71
CPEB1-215ENST00000617958 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
CPEB1-215ENST00000617958 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
CPEB1-215ENST00000617958 MT2AP02795 61 aa4.33□□□□□ -1.72
CPEB1-215ENST00000617958 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
CPEB1-215ENST00000617958 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
CPEB1-215ENST00000617958 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
CPEB1-215ENST00000617958 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
CPEB1-215ENST00000617958 LCE2BO14633 110 aa4.18□□□□□ -1.74
CPEB1-215ENST00000617958 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
CPEB1-215ENST00000617958 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
CPEB1-215ENST00000617958 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
CPEB1-215ENST00000617958 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
CPEB1-215ENST00000617958 KMT2DO14686 5537 aa4.08□□□□□ -1.76
CPEB1-215ENST00000617958 MT1BP07438 61 aa4.07□□□□□ -1.76
CPEB1-215ENST00000617958 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
CPEB1-215ENST00000617958 MT1XP80297 61 aa3.99□□□□□ -1.77
CPEB1-215ENST00000617958 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
CPEB1-215ENST00000617958 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
CPEB1-215ENST00000617958 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
CPEB1-215ENST00000617958 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
CPEB1-215ENST00000617958 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
CPEB1-215ENST00000617958 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
CPEB1-215ENST00000617958 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
CPEB1-215ENST00000617958 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
CPEB1-215ENST00000617958 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
CPEB1-215ENST00000617958 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
CPEB1-215ENST00000617958 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
CPEB1-215ENST00000617958 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
CPEB1-215ENST00000617958 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
CPEB1-215ENST00000617958 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms