RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
TRAPPC3-210ENST00000617904 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
TRAPPC3-210ENST00000617904 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.02
TRAPPC3-210ENST00000617904 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
TRAPPC3-210ENST00000617904 V9GYY9 64 aa8.68□□□□□ -1.02
TRAPPC3-210ENST00000617904 KRTAP4-1Q9BYQ7 146 aa8.63□□□□□ -1.03
TRAPPC3-210ENST00000617904 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
TRAPPC3-210ENST00000617904 Q1T7F1 81 aa8.54□□□□□ -1.04
TRAPPC3-210ENST00000617904 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
TRAPPC3-210ENST00000617904 MPLKIPQ8TAP9 179 aa8.54□□□□□ -1.04
TRAPPC3-210ENST00000617904 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
TRAPPC3-210ENST00000617904 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
TRAPPC3-210ENST00000617904 S4R3F8 94 aa8.49□□□□□ -1.05
TRAPPC3-210ENST00000617904 SEC61GP60059 68 aa8.47□□□□□ -1.05
TRAPPC3-210ENST00000617904 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
TRAPPC3-210ENST00000617904 KRTAP19-2Q3LHN2 52 aa8.42□□□□□ -1.06
TRAPPC3-210ENST00000617904 A0A1B0GU69 56 aa8.39□□□□□ -1.07
TRAPPC3-210ENST00000617904 CRCT1Q9UGL9 99 aa8.38□□□□□ -1.07
TRAPPC3-210ENST00000617904 LCA10Q71F78 164 aa8.35□□□□□ -1.07
TRAPPC3-210ENST00000617904 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC3-210ENST00000617904 MT1HP80294 61 aa8.34□□□□□ -1.07
TRAPPC3-210ENST00000617904 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
TRAPPC3-210ENST00000617904 PSPHP1O15172 72 aa8.33□□□□□ -1.08
TRAPPC3-210ENST00000617904 FSIP2Q5CZC0 6907 aa8.27□□□□□ -1.08
TRAPPC3-210ENST00000617904 KRTAP10-6P60371 365 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC3-210ENST00000617904 Q5VV11 94 aa8.22□□□□□ -1.09
TRAPPC3-210ENST00000617904 A6NED7 52 aa8.19□□□□□ -1.1
TRAPPC3-210ENST00000617904 UQCR11O14957 56 aa8.16□□□□□ -1.1
TRAPPC3-210ENST00000617904 FLGP20930 4061 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC3-210ENST00000617904 M0R2T5 61 aa8.12□□□□□ -1.11
TRAPPC3-210ENST00000617904 H0YAA0 97 aa8.11□□□□□ -1.11
TRAPPC3-210ENST00000617904 A0A1B0GU33 70 aa8.09□□□□□ -1.11
TRAPPC3-210ENST00000617904 BRK1Q8WUW1 75 aa8.07□□□□□ -1.12
TRAPPC3-210ENST00000617904 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
TRAPPC3-210ENST00000617904 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
TRAPPC3-210ENST00000617904 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
TRAPPC3-210ENST00000617904 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
TRAPPC3-210ENST00000617904 M0QZ58 72 aa7.93□□□□□ -1.14
TRAPPC3-210ENST00000617904 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
TRAPPC3-210ENST00000617904 P0C880 135 aa7.9□□□□□ -1.14
TRAPPC3-210ENST00000617904 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
TRAPPC3-210ENST00000617904 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
TRAPPC3-210ENST00000617904 KRTAP9-8Q9BYQ0 159 aa7.87□□□□□ -1.15
TRAPPC3-210ENST00000617904 K7ERS5 55 aa7.86□□□□□ -1.15
TRAPPC3-210ENST00000617904 R4GN34 69 aa7.86□□□□□ -1.15
TRAPPC3-210ENST00000617904 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
TRAPPC3-210ENST00000617904 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC3-210ENST00000617904 USH2AO75445 5202 aa7.81□□□□□ -1.16
TRAPPC3-210ENST00000617904 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
TRAPPC3-210ENST00000617904 SSPOA2VEC9 5147 aa7.79□□□□□ -1.16
TRAPPC3-210ENST00000617904 MT2AP02795 61 aa7.72□□□□□ -1.17
TRAPPC3-210ENST00000617904 A0A0D9SG42 100 aa7.71□□□□□ -1.18
TRAPPC3-210ENST00000617904 A8MU10 97 aa7.68□□□□□ -1.18
TRAPPC3-210ENST00000617904 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
TRAPPC3-210ENST00000617904 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
TRAPPC3-210ENST00000617904 FCGBPQ9Y6R7 5405 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC3-210ENST00000617904 MT1FP04733 61 aa7.66□□□□□ -1.18
TRAPPC3-210ENST00000617904 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
TRAPPC3-210ENST00000617904 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
TRAPPC3-210ENST00000617904 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
TRAPPC3-210ENST00000617904 KRTAP9-3Q9BYQ3 159 aa7.63□□□□□ -1.19
TRAPPC3-210ENST00000617904 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
TRAPPC3-210ENST00000617904 A6NN06 94 aa7.58□□□□□ -1.2
TRAPPC3-210ENST00000617904 KRTAP12-1P59990 96 aa7.5□□□□□ -1.21
TRAPPC3-210ENST00000617904 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
TRAPPC3-210ENST00000617904 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
TRAPPC3-210ENST00000617904 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
TRAPPC3-210ENST00000617904 KRTAP19-6Q3LI70 58 aa7.42□□□□□ -1.22
TRAPPC3-210ENST00000617904 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
TRAPPC3-210ENST00000617904 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
TRAPPC3-210ENST00000617904 ROMO1P60602 79 aa7.35□□□□□ -1.23
TRAPPC3-210ENST00000617904 SYNE2Q8WXH0 6885 aaKnown RBP7.34□□□□□ -1.23
TRAPPC3-210ENST00000617904 KTN1-AS1Q86SY8 53 aa7.33□□□□□ -1.24
TRAPPC3-210ENST00000617904 KRTAP19-8Q3LI54 63 aa7.27□□□□□ -1.24
TRAPPC3-210ENST00000617904 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
TRAPPC3-210ENST00000617904 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
TRAPPC3-210ENST00000617904 SVIPQ8NHG7 77 aa7.21□□□□□ -1.26
TRAPPC3-210ENST00000617904 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
TRAPPC3-210ENST00000617904 MT1BP07438 61 aa7.09□□□□□ -1.27
TRAPPC3-210ENST00000617904 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
TRAPPC3-210ENST00000617904 TNP1P09430 55 aa7.05□□□□□ -1.28
TRAPPC3-210ENST00000617904 C10orf95Q9H7T3 257 aa7.04□□□□□ -1.28
TRAPPC3-210ENST00000617904 PRAC1Q96KF2 57 aa7□□□□□ -1.29
TRAPPC3-210ENST00000617904 NEBP20929 6669 aa6.98□□□□□ -1.29
TRAPPC3-210ENST00000617904 KRTAP4-12Q9BQ66 201 aa6.97□□□□□ -1.29
TRAPPC3-210ENST00000617904 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
TRAPPC3-210ENST00000617904 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
TRAPPC3-210ENST00000617904 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
TRAPPC3-210ENST00000617904 MT1XP80297 61 aa6.87□□□□□ -1.31
TRAPPC3-210ENST00000617904 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
TRAPPC3-210ENST00000617904 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
TRAPPC3-210ENST00000617904 KRTAP5-9P26371 169 aa6.79□□□□□ -1.32
TRAPPC3-210ENST00000617904 KRTAP20-1Q3LI63 56 aa6.79□□□□□ -1.32
TRAPPC3-210ENST00000617904 KRTAP9-9Q9BYP9 154 aa6.76□□□□□ -1.33
TRAPPC3-210ENST00000617904 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
TRAPPC3-210ENST00000617904 KMT2DO14686 5537 aa6.71□□□□□ -1.34
TRAPPC3-210ENST00000617904 MDN1Q9NU22 5596 aa6.69□□□□□ -1.34
TRAPPC3-210ENST00000617904 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
TRAPPC3-210ENST00000617904 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.35
TRAPPC3-210ENST00000617904 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms