RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
CNTNAP3B-213ENST00000617848 IGKV2D-30A0A075B6S6 120 aa4.68□□□□□ -1.66
CNTNAP3B-213ENST00000617848 RPL37P61927 97 aaKnown RBP4.68□□□□□ -1.66
CNTNAP3B-213ENST00000617848 ATP11AUNQ6ZP68 121 aa4.68□□□□□ -1.66
CNTNAP3B-213ENST00000617848 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
CNTNAP3B-213ENST00000617848 HRES1P13985 223 aa4.64□□□□□ -1.67
CNTNAP3B-213ENST00000617848 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
CNTNAP3B-213ENST00000617848 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
CNTNAP3B-213ENST00000617848 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
CNTNAP3B-213ENST00000617848 SPINK7P58062 85 aa4.61□□□□□ -1.67
CNTNAP3B-213ENST00000617848 ACYP2P14621 99 aa4.57□□□□□ -1.68
CNTNAP3B-213ENST00000617848 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CNTNAP3B-213ENST00000617848 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
CNTNAP3B-213ENST00000617848 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
CNTNAP3B-213ENST00000617848 C4orf26Q17RF5 130 aa4.54□□□□□ -1.68
CNTNAP3B-213ENST00000617848 COA5Q86WW8 74 aa4.54□□□□□ -1.68
CNTNAP3B-213ENST00000617848 A8MUN3 132 aa4.53□□□□□ -1.68
CNTNAP3B-213ENST00000617848 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
CNTNAP3B-213ENST00000617848 COX6B2Q6YFQ2 88 aa4.51□□□□□ -1.69
CNTNAP3B-213ENST00000617848 LPAP08519 4548 aa4.49□□□□□ -1.69
CNTNAP3B-213ENST00000617848 CHKB-CPT1BH3BT56 60 aa4.48□□□□□ -1.69
CNTNAP3B-213ENST00000617848 MUC17Q685J3 4493 aa4.46□□□□□ -1.69
CNTNAP3B-213ENST00000617848 PCLOQ9Y6V0 5065 aa4.46□□□□□ -1.7
CNTNAP3B-213ENST00000617848 LRP2P98164 4655 aa4.46□□□□□ -1.7
CNTNAP3B-213ENST00000617848 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
CNTNAP3B-213ENST00000617848 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
CNTNAP3B-213ENST00000617848 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
CNTNAP3B-213ENST00000617848 Q1T7F1 81 aa4.42□□□□□ -1.7
CNTNAP3B-213ENST00000617848 V9GYY9 64 aa4.42□□□□□ -1.7
CNTNAP3B-213ENST00000617848 SPTSSBQ8NFR3 76 aa4.41□□□□□ -1.7
CNTNAP3B-213ENST00000617848 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
CNTNAP3B-213ENST00000617848 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
CNTNAP3B-213ENST00000617848 HERC1Q15751 4861 aa4.4□□□□□ -1.71
CNTNAP3B-213ENST00000617848 LINC01558Q9Y6Z2 57 aa4.39□□□□□ -1.71
CNTNAP3B-213ENST00000617848 S4R3F8 94 aa4.36□□□□□ -1.71
CNTNAP3B-213ENST00000617848 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
CNTNAP3B-213ENST00000617848 LCA10Q71F78 164 aa4.33□□□□□ -1.72
CNTNAP3B-213ENST00000617848 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
CNTNAP3B-213ENST00000617848 PSPHP1O15172 72 aa4.32□□□□□ -1.72
CNTNAP3B-213ENST00000617848 A0A1B0GU69 56 aa4.3□□□□□ -1.72
CNTNAP3B-213ENST00000617848 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
CNTNAP3B-213ENST00000617848 SEC61GP60059 68 aa4.29□□□□□ -1.72
CNTNAP3B-213ENST00000617848 Q5VV11 94 aa4.29□□□□□ -1.72
CNTNAP3B-213ENST00000617848 CSAG1Q6PB30 78 aa4.28□□□□□ -1.72
CNTNAP3B-213ENST00000617848 A6NED7 52 aa4.2□□□□□ -1.74
CNTNAP3B-213ENST00000617848 H0YAA0 97 aa4.18□□□□□ -1.74
CNTNAP3B-213ENST00000617848 UQCR11O14957 56 aa4.18□□□□□ -1.74
CNTNAP3B-213ENST00000617848 A0A1B0GU33 70 aa4.17□□□□□ -1.74
CNTNAP3B-213ENST00000617848 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
CNTNAP3B-213ENST00000617848 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
CNTNAP3B-213ENST00000617848 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
CNTNAP3B-213ENST00000617848 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
CNTNAP3B-213ENST00000617848 FLGP20930 4061 aaPredicted RBP4.14□□□□□ -1.75
CNTNAP3B-213ENST00000617848 P0C880 135 aa4.13□□□□□ -1.75
CNTNAP3B-213ENST00000617848 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
CNTNAP3B-213ENST00000617848 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
CNTNAP3B-213ENST00000617848 MT1HP80294 61 aa4.11□□□□□ -1.75
CNTNAP3B-213ENST00000617848 M0R2T5 61 aa4.08□□□□□ -1.76
CNTNAP3B-213ENST00000617848 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
CNTNAP3B-213ENST00000617848 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
CNTNAP3B-213ENST00000617848 A8MU10 97 aa4.07□□□□□ -1.76
CNTNAP3B-213ENST00000617848 M0QZ58 72 aa4.07□□□□□ -1.76
CNTNAP3B-213ENST00000617848 MUC2Q02817 5179 aa4.06□□□□□ -1.76
CNTNAP3B-213ENST00000617848 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
CNTNAP3B-213ENST00000617848 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
CNTNAP3B-213ENST00000617848 FAT4Q6V0I7 4981 aa4.02□□□□□ -1.77
CNTNAP3B-213ENST00000617848 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
CNTNAP3B-213ENST00000617848 R4GN34 69 aa4.01□□□□□ -1.77
CNTNAP3B-213ENST00000617848 A0A0D9SG42 100 aa3.99□□□□□ -1.77
CNTNAP3B-213ENST00000617848 K7ERS5 55 aa3.96□□□□□ -1.78
CNTNAP3B-213ENST00000617848 MT2AP02795 61 aa3.95□□□□□ -1.78
CNTNAP3B-213ENST00000617848 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
CNTNAP3B-213ENST00000617848 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
CNTNAP3B-213ENST00000617848 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
CNTNAP3B-213ENST00000617848 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
CNTNAP3B-213ENST00000617848 MT1FP04733 61 aa3.92□□□□□ -1.78
CNTNAP3B-213ENST00000617848 A6NN06 94 aa3.91□□□□□ -1.78
CNTNAP3B-213ENST00000617848 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
CNTNAP3B-213ENST00000617848 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
CNTNAP3B-213ENST00000617848 SPRR2GQ9BYE4 73 aa3.89□□□□□ -1.79
CNTNAP3B-213ENST00000617848 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
CNTNAP3B-213ENST00000617848 ROMO1P60602 79 aa3.79□□□□□ -1.8
CNTNAP3B-213ENST00000617848 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
CNTNAP3B-213ENST00000617848 PLAC4Q8WY50 150 aa3.79□□□□□ -1.8
CNTNAP3B-213ENST00000617848 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
CNTNAP3B-213ENST00000617848 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
CNTNAP3B-213ENST00000617848 SVIPQ8NHG7 77 aa3.76□□□□□ -1.81
CNTNAP3B-213ENST00000617848 MT1BP07438 61 aa3.72□□□□□ -1.81
CNTNAP3B-213ENST00000617848 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
CNTNAP3B-213ENST00000617848 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
CNTNAP3B-213ENST00000617848 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
CNTNAP3B-213ENST00000617848 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CNTNAP3B-213ENST00000617848 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
CNTNAP3B-213ENST00000617848 TNP1P09430 55 aa3.61□□□□□ -1.83
CNTNAP3B-213ENST00000617848 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
CNTNAP3B-213ENST00000617848 MT1XP80297 61 aa3.6□□□□□ -1.83
CNTNAP3B-213ENST00000617848 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
CNTNAP3B-213ENST00000617848 MT3P25713 68 aa3.58□□□□□ -1.84
CNTNAP3B-213ENST00000617848 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
CNTNAP3B-213ENST00000617848 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms