RNA–Protein interactions for RNA: ENST00000617178.4

POLDIP3-209, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene POLDIP3, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-209ENST00000617178 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
POLDIP3-209ENST00000617178 RETNLBQ9BQ08 111 aa7.56□□□□□ -1.2
POLDIP3-209ENST00000617178 SPINK1P00995 79 aa7.52□□□□□ -1.2
POLDIP3-209ENST00000617178 KRTAP16-1A8MUX0 517 aa7.49□□□□□ -1.21
POLDIP3-209ENST00000617178 IGKV2D-30A0A075B6S6 120 aa7.48□□□□□ -1.21
POLDIP3-209ENST00000617178 CSAG1Q6PB30 78 aa7.45□□□□□ -1.22
POLDIP3-209ENST00000617178 LPAP08519 4548 aa7.44□□□□□ -1.22
POLDIP3-209ENST00000617178 RPS29P62273 56 aaKnown RBP7.44□□□□□ -1.22
POLDIP3-209ENST00000617178 HMCN2Q8NDA2 5059 aa7.36□□□□□ -1.23
POLDIP3-209ENST00000617178 H3BS24 57 aa7.32□□□□□ -1.24
POLDIP3-209ENST00000617178 LRP2P98164 4655 aa7.31□□□□□ -1.24
POLDIP3-209ENST00000617178 A8MUU9 505 aa7.31□□□□□ -1.24
POLDIP3-209ENST00000617178 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
POLDIP3-209ENST00000617178 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
POLDIP3-209ENST00000617178 H0YAA0 97 aa7.26□□□□□ -1.25
POLDIP3-209ENST00000617178 A0A1B0GU33 70 aa7.22□□□□□ -1.25
POLDIP3-209ENST00000617178 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
POLDIP3-209ENST00000617178 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
POLDIP3-209ENST00000617178 UBR4Q5T4S7 5183 aa7.17□□□□□ -1.26
POLDIP3-209ENST00000617178 ROMO1P60602 79 aa7.17□□□□□ -1.26
POLDIP3-209ENST00000617178 XP32Q5T750 250 aa7.16□□□□□ -1.26
POLDIP3-209ENST00000617178 K7ERS5 55 aa7.13□□□□□ -1.27
POLDIP3-209ENST00000617178 MUC2Q02817 5179 aa7.1□□□□□ -1.27
POLDIP3-209ENST00000617178 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
POLDIP3-209ENST00000617178 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
POLDIP3-209ENST00000617178 RNF213Q63HN8 5207 aa7.04□□□□□ -1.28
POLDIP3-209ENST00000617178 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
POLDIP3-209ENST00000617178 RPL37P61927 97 aaKnown RBP7.03□□□□□ -1.28
POLDIP3-209ENST00000617178 COX6B2Q6YFQ2 88 aa7□□□□□ -1.29
POLDIP3-209ENST00000617178 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
POLDIP3-209ENST00000617178 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
POLDIP3-209ENST00000617178 P0C880 135 aa6.9□□□□□ -1.3
POLDIP3-209ENST00000617178 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
POLDIP3-209ENST00000617178 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
POLDIP3-209ENST00000617178 FAT4Q6V0I7 4981 aa6.78□□□□□ -1.32
POLDIP3-209ENST00000617178 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
POLDIP3-209ENST00000617178 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
POLDIP3-209ENST00000617178 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
POLDIP3-209ENST00000617178 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
POLDIP3-209ENST00000617178 A0A0D9SG42 100 aa6.72□□□□□ -1.33
POLDIP3-209ENST00000617178 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.34
POLDIP3-209ENST00000617178 S4R3F8 94 aa6.68□□□□□ -1.34
POLDIP3-209ENST00000617178 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
POLDIP3-209ENST00000617178 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
POLDIP3-209ENST00000617178 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
POLDIP3-209ENST00000617178 NDUFAF8A1L188 74 aa6.59□□□□□ -1.35
POLDIP3-209ENST00000617178 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
POLDIP3-209ENST00000617178 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.35
POLDIP3-209ENST00000617178 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
POLDIP3-209ENST00000617178 M0QZ58 72 aa6.52□□□□□ -1.37
POLDIP3-209ENST00000617178 MT1HP80294 61 aa6.52□□□□□ -1.37
POLDIP3-209ENST00000617178 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
POLDIP3-209ENST00000617178 M0R2T5 61 aa6.46□□□□□ -1.38
POLDIP3-209ENST00000617178 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
POLDIP3-209ENST00000617178 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
POLDIP3-209ENST00000617178 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
POLDIP3-209ENST00000617178 R4GN34 69 aa6.21□□□□□ -1.41
POLDIP3-209ENST00000617178 MT2AP02795 61 aa6.18□□□□□ -1.42
POLDIP3-209ENST00000617178 MT1FP04733 61 aa6.15□□□□□ -1.42
POLDIP3-209ENST00000617178 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
POLDIP3-209ENST00000617178 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
POLDIP3-209ENST00000617178 LUZP6Q538Z0 58 aa6.09□□□□□ -1.43
POLDIP3-209ENST00000617178 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
POLDIP3-209ENST00000617178 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
POLDIP3-209ENST00000617178 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
POLDIP3-209ENST00000617178 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
POLDIP3-209ENST00000617178 USH2AO75445 5202 aa5.95□□□□□ -1.46
POLDIP3-209ENST00000617178 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
POLDIP3-209ENST00000617178 LCE2BO14633 110 aa5.92□□□□□ -1.46
POLDIP3-209ENST00000617178 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
POLDIP3-209ENST00000617178 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
POLDIP3-209ENST00000617178 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
POLDIP3-209ENST00000617178 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
POLDIP3-209ENST00000617178 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
POLDIP3-209ENST00000617178 TNP1P09430 55 aa5.8□□□□□ -1.48
POLDIP3-209ENST00000617178 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
POLDIP3-209ENST00000617178 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
POLDIP3-209ENST00000617178 MT1BP07438 61 aa5.74□□□□□ -1.49
POLDIP3-209ENST00000617178 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
POLDIP3-209ENST00000617178 KRTAP9-6A0A140TA67 174 aa5.58□□□□□ -1.52
POLDIP3-209ENST00000617178 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
POLDIP3-209ENST00000617178 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
POLDIP3-209ENST00000617178 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
POLDIP3-209ENST00000617178 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
POLDIP3-209ENST00000617178 MT1XP80297 61 aa5.49□□□□□ -1.53
POLDIP3-209ENST00000617178 INE1O15225 51 aa5.44□□□□□ -1.54
POLDIP3-209ENST00000617178 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
POLDIP3-209ENST00000617178 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
POLDIP3-209ENST00000617178 KMT2DO14686 5537 aa5.37□□□□□ -1.55
POLDIP3-209ENST00000617178 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
POLDIP3-209ENST00000617178 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
POLDIP3-209ENST00000617178 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
POLDIP3-209ENST00000617178 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
POLDIP3-209ENST00000617178 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
POLDIP3-209ENST00000617178 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
POLDIP3-209ENST00000617178 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
POLDIP3-209ENST00000617178 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
POLDIP3-209ENST00000617178 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
POLDIP3-209ENST00000617178 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
POLDIP3-209ENST00000617178 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms