RNA–Protein interactions for RNA: ENST00000616579.4

TMPRSS4-219, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMPRSS4, Length 3,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-219ENST00000616579 A0A1B0GU33 70 aa4.66□□□□□ -1.66
TMPRSS4-219ENST00000616579 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
TMPRSS4-219ENST00000616579 A0A0D9SG42 100 aa4.65□□□□□ -1.66
TMPRSS4-219ENST00000616579 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
TMPRSS4-219ENST00000616579 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
TMPRSS4-219ENST00000616579 K7ERS5 55 aa4.64□□□□□ -1.67
TMPRSS4-219ENST00000616579 EPPK1P58107 5090 aaKnown RBP4.63□□□□□ -1.67
TMPRSS4-219ENST00000616579 RYR2Q92736 4967 aa4.61□□□□□ -1.67
TMPRSS4-219ENST00000616579 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
TMPRSS4-219ENST00000616579 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
TMPRSS4-219ENST00000616579 A0A1B0GVY2 172 aa4.59□□□□□ -1.68
TMPRSS4-219ENST00000616579 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.68
TMPRSS4-219ENST00000616579 H0YAA0 97 aa4.58□□□□□ -1.68
TMPRSS4-219ENST00000616579 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
TMPRSS4-219ENST00000616579 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
TMPRSS4-219ENST00000616579 KRTAP10-4P60372 401 aaPredicted RBP4.55□□□□□ -1.68
TMPRSS4-219ENST00000616579 LPAP08519 4548 aa4.54□□□□□ -1.68
TMPRSS4-219ENST00000616579 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
TMPRSS4-219ENST00000616579 HSPG2P98160 4391 aa4.52□□□□□ -1.69
TMPRSS4-219ENST00000616579 MUC2Q02817 5179 aa4.5□□□□□ -1.69
TMPRSS4-219ENST00000616579 RPL37P61927 97 aaKnown RBP4.49□□□□□ -1.69
TMPRSS4-219ENST00000616579 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
TMPRSS4-219ENST00000616579 S4R3F8 94 aa4.49□□□□□ -1.69
TMPRSS4-219ENST00000616579 LRP2P98164 4655 aa4.49□□□□□ -1.69
TMPRSS4-219ENST00000616579 KRTAP10-8P60410 259 aa4.46□□□□□ -1.69
TMPRSS4-219ENST00000616579 XP32Q5T750 250 aa4.46□□□□□ -1.69
TMPRSS4-219ENST00000616579 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
TMPRSS4-219ENST00000616579 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
TMPRSS4-219ENST00000616579 TNXBP22105 4242 aa4.43□□□□□ -1.7
TMPRSS4-219ENST00000616579 HERC2O95714 4834 aa4.41□□□□□ -1.7
TMPRSS4-219ENST00000616579 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
TMPRSS4-219ENST00000616579 HERC1Q15751 4861 aa4.41□□□□□ -1.7
TMPRSS4-219ENST00000616579 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
TMPRSS4-219ENST00000616579 KRTAP3-3Q9BYR6 98 aa4.37□□□□□ -1.71
TMPRSS4-219ENST00000616579 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
TMPRSS4-219ENST00000616579 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
TMPRSS4-219ENST00000616579 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
TMPRSS4-219ENST00000616579 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
TMPRSS4-219ENST00000616579 KRTAP3-2Q9BYR7 98 aa4.31□□□□□ -1.72
TMPRSS4-219ENST00000616579 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
TMPRSS4-219ENST00000616579 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
TMPRSS4-219ENST00000616579 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
TMPRSS4-219ENST00000616579 TPRXLQ17RH7 258 aa4.28□□□□□ -1.72
TMPRSS4-219ENST00000616579 R4GN34 69 aa4.28□□□□□ -1.72
TMPRSS4-219ENST00000616579 M0QZ58 72 aa4.28□□□□□ -1.72
TMPRSS4-219ENST00000616579 FAT4Q6V0I7 4981 aa4.27□□□□□ -1.73
TMPRSS4-219ENST00000616579 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
TMPRSS4-219ENST00000616579 M0R2T5 61 aa4.23□□□□□ -1.73
TMPRSS4-219ENST00000616579 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
TMPRSS4-219ENST00000616579 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
TMPRSS4-219ENST00000616579 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
TMPRSS4-219ENST00000616579 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
TMPRSS4-219ENST00000616579 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
TMPRSS4-219ENST00000616579 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
TMPRSS4-219ENST00000616579 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
TMPRSS4-219ENST00000616579 USH2AO75445 5202 aa3.93□□□□□ -1.78
TMPRSS4-219ENST00000616579 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
TMPRSS4-219ENST00000616579 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
TMPRSS4-219ENST00000616579 TNP1P09430 55 aa3.86□□□□□ -1.79
TMPRSS4-219ENST00000616579 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
TMPRSS4-219ENST00000616579 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
TMPRSS4-219ENST00000616579 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
TMPRSS4-219ENST00000616579 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
TMPRSS4-219ENST00000616579 FLGP20930 4061 aaPredicted RBP3.77□□□□□ -1.81
TMPRSS4-219ENST00000616579 KMT2DO14686 5537 aa3.69□□□□□ -1.82
TMPRSS4-219ENST00000616579 LCE2CQ5TA81 110 aa3.63□□□□□ -1.83
TMPRSS4-219ENST00000616579 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
TMPRSS4-219ENST00000616579 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
TMPRSS4-219ENST00000616579 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
TMPRSS4-219ENST00000616579 MT1HP80294 61 aa3.6□□□□□ -1.83
TMPRSS4-219ENST00000616579 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
TMPRSS4-219ENST00000616579 MT1FP04733 61 aa3.57□□□□□ -1.84
TMPRSS4-219ENST00000616579 MT2AP02795 61 aa3.56□□□□□ -1.84
TMPRSS4-219ENST00000616579 INE1O15225 51 aa3.5□□□□□ -1.85
TMPRSS4-219ENST00000616579 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
TMPRSS4-219ENST00000616579 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
TMPRSS4-219ENST00000616579 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
TMPRSS4-219ENST00000616579 LCE2DQ5TA82 110 aaPredicted RBP3.47□□□□□ -1.85
TMPRSS4-219ENST00000616579 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
TMPRSS4-219ENST00000616579 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
TMPRSS4-219ENST00000616579 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
TMPRSS4-219ENST00000616579 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
TMPRSS4-219ENST00000616579 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
TMPRSS4-219ENST00000616579 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
TMPRSS4-219ENST00000616579 MT1BP07438 61 aa3.42□□□□□ -1.86
TMPRSS4-219ENST00000616579 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
TMPRSS4-219ENST00000616579 MT1XP80297 61 aa3.4□□□□□ -1.86
TMPRSS4-219ENST00000616579 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
TMPRSS4-219ENST00000616579 LCE2AQ5TA79 106 aaPredicted RBP3.37□□□□□ -1.87
TMPRSS4-219ENST00000616579 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
TMPRSS4-219ENST00000616579 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
TMPRSS4-219ENST00000616579 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
TMPRSS4-219ENST00000616579 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
TMPRSS4-219ENST00000616579 KRTAP9-3Q9BYQ3 159 aa3.34□□□□□ -1.88
TMPRSS4-219ENST00000616579 KRTAP4-8A0A0G2JLE6 195 aa3.31□□□□□ -1.88
TMPRSS4-219ENST00000616579 KRTAP4-8Q9BYQ9 185 aa3.31□□□□□ -1.88
TMPRSS4-219ENST00000616579 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
TMPRSS4-219ENST00000616579 LCE2BO14633 110 aa3.28□□□□□ -1.88
TMPRSS4-219ENST00000616579 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
TMPRSS4-219ENST00000616579 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms