RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 COX7CP15954 63 aa4.81□□□□□ -1.64
PDLIM2-219ENST00000616289 Q5VV11 94 aa4.81□□□□□ -1.64
PDLIM2-219ENST00000616289 TMEM258P61165 79 aa4.8□□□□□ -1.64
PDLIM2-219ENST00000616289 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
PDLIM2-219ENST00000616289 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
PDLIM2-219ENST00000616289 CXCL6P80162 114 aa4.79□□□□□ -1.64
PDLIM2-219ENST00000616289 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
PDLIM2-219ENST00000616289 S4R3F8 94 aa4.79□□□□□ -1.64
PDLIM2-219ENST00000616289 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
PDLIM2-219ENST00000616289 LCA10Q71F78 164 aa4.77□□□□□ -1.65
PDLIM2-219ENST00000616289 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
PDLIM2-219ENST00000616289 HIST1H4AP62805 103 aaKnown RBP4.76□□□□□ -1.65
PDLIM2-219ENST00000616289 CSAG1Q6PB30 78 aa4.75□□□□□ -1.65
PDLIM2-219ENST00000616289 C1orf64Q8NEQ6 169 aa4.75□□□□□ -1.65
PDLIM2-219ENST00000616289 KMT2DO14686 5537 aa4.73□□□□□ -1.65
PDLIM2-219ENST00000616289 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
PDLIM2-219ENST00000616289 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
PDLIM2-219ENST00000616289 KLKP1Q107X0 134 aa4.72□□□□□ -1.65
PDLIM2-219ENST00000616289 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
PDLIM2-219ENST00000616289 ATP5EP2Q5VTU8 51 aa4.71□□□□□ -1.66
PDLIM2-219ENST00000616289 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
PDLIM2-219ENST00000616289 UBL5Q9BZL1 73 aa4.68□□□□□ -1.66
PDLIM2-219ENST00000616289 ATP5EP56381 51 aaPredicted RBP4.64□□□□□ -1.67
PDLIM2-219ENST00000616289 TP53AIP1Q9HCN2 124 aa4.64□□□□□ -1.67
PDLIM2-219ENST00000616289 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
PDLIM2-219ENST00000616289 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
PDLIM2-219ENST00000616289 A0A087WVE0 104 aa4.63□□□□□ -1.67
PDLIM2-219ENST00000616289 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
PDLIM2-219ENST00000616289 CYP4F30PQ9H0H9 118 aa4.6□□□□□ -1.67
PDLIM2-219ENST00000616289 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
PDLIM2-219ENST00000616289 NDUFC1O43677 76 aa4.59□□□□□ -1.67
PDLIM2-219ENST00000616289 CYSTM1Q9H1C7 97 aa4.59□□□□□ -1.67
PDLIM2-219ENST00000616289 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
PDLIM2-219ENST00000616289 TRAV22A0A0B4J277 110 aa4.55□□□□□ -1.68
PDLIM2-219ENST00000616289 C20orf197Q8N268 126 aa4.55□□□□□ -1.68
PDLIM2-219ENST00000616289 H7BZZ5 65 aa4.54□□□□□ -1.68
PDLIM2-219ENST00000616289 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
PDLIM2-219ENST00000616289 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
PDLIM2-219ENST00000616289 LOC101927531A0A1B0GV80 90 aa4.53□□□□□ -1.68
PDLIM2-219ENST00000616289 H0YAA0 97 aa4.53□□□□□ -1.68
PDLIM2-219ENST00000616289 SPRR2FQ96RM1 72 aa4.53□□□□□ -1.68
PDLIM2-219ENST00000616289 SPRR2EP22531 72 aa4.51□□□□□ -1.69
PDLIM2-219ENST00000616289 SPRR2BP35325 72 aa4.51□□□□□ -1.69
PDLIM2-219ENST00000616289 SPRR2AP35326 72 aa4.51□□□□□ -1.69
PDLIM2-219ENST00000616289 V9GYY9 64 aa4.51□□□□□ -1.69
PDLIM2-219ENST00000616289 MT1XP80297 61 aa4.5□□□□□ -1.69
PDLIM2-219ENST00000616289 A8MUN3 132 aa4.49□□□□□ -1.69
PDLIM2-219ENST00000616289 ADM2Q7Z4H4 148 aa4.49□□□□□ -1.69
PDLIM2-219ENST00000616289 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
PDLIM2-219ENST00000616289 H0Y9P7 68 aa4.45□□□□□ -1.7
PDLIM2-219ENST00000616289 SEC61GP60059 68 aa4.45□□□□□ -1.7
PDLIM2-219ENST00000616289 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
PDLIM2-219ENST00000616289 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
PDLIM2-219ENST00000616289 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
PDLIM2-219ENST00000616289 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
PDLIM2-219ENST00000616289 SNURFQ9Y675 71 aa4.43□□□□□ -1.7
PDLIM2-219ENST00000616289 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
PDLIM2-219ENST00000616289 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
PDLIM2-219ENST00000616289 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
PDLIM2-219ENST00000616289 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
PDLIM2-219ENST00000616289 R4GN34 69 aa4.38□□□□□ -1.71
PDLIM2-219ENST00000616289 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
PDLIM2-219ENST00000616289 P0C880 135 aa4.37□□□□□ -1.71
PDLIM2-219ENST00000616289 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
PDLIM2-219ENST00000616289 SPRR2DP22532 72 aa4.36□□□□□ -1.71
PDLIM2-219ENST00000616289 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
PDLIM2-219ENST00000616289 Q1T7F1 81 aa4.36□□□□□ -1.71
PDLIM2-219ENST00000616289 LINC00208Q96KT6 92 aa4.35□□□□□ -1.71
PDLIM2-219ENST00000616289 H3BPC8 53 aa4.34□□□□□ -1.71
PDLIM2-219ENST00000616289 M0QZ58 72 aa4.34□□□□□ -1.71
PDLIM2-219ENST00000616289 MP68P56378 58 aa4.3□□□□□ -1.72
PDLIM2-219ENST00000616289 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
PDLIM2-219ENST00000616289 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
PDLIM2-219ENST00000616289 KRTAP3-2Q9BYR7 98 aa4.29□□□□□ -1.72
PDLIM2-219ENST00000616289 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
PDLIM2-219ENST00000616289 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
PDLIM2-219ENST00000616289 DMAC1Q96GE9 116 aa4.25□□□□□ -1.73
PDLIM2-219ENST00000616289 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
PDLIM2-219ENST00000616289 SPANXA2-OT1Q8N9U9 137 aa4.24□□□□□ -1.73
PDLIM2-219ENST00000616289 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
PDLIM2-219ENST00000616289 PSPHP1O15172 72 aa4.2□□□□□ -1.74
PDLIM2-219ENST00000616289 CHKB-CPT1BH3BT56 60 aa4.16□□□□□ -1.74
PDLIM2-219ENST00000616289 PRR15LQ9BU68 103 aa4.15□□□□□ -1.75
PDLIM2-219ENST00000616289 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
PDLIM2-219ENST00000616289 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
PDLIM2-219ENST00000616289 A6NED7 52 aa4.12□□□□□ -1.75
PDLIM2-219ENST00000616289 SPTSSBQ8NFR3 76 aa4.11□□□□□ -1.75
PDLIM2-219ENST00000616289 ACYP2P14621 99 aa4.09□□□□□ -1.75
PDLIM2-219ENST00000616289 COA5Q86WW8 74 aa4.09□□□□□ -1.75
PDLIM2-219ENST00000616289 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
PDLIM2-219ENST00000616289 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
PDLIM2-219ENST00000616289 A8MU10 97 aa4.03□□□□□ -1.76
PDLIM2-219ENST00000616289 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
PDLIM2-219ENST00000616289 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
PDLIM2-219ENST00000616289 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
PDLIM2-219ENST00000616289 MT1EP04732 61 aa4□□□□□ -1.77
PDLIM2-219ENST00000616289 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
PDLIM2-219ENST00000616289 CAMK2N1Q7Z7J9 78 aa3.99□□□□□ -1.77
PDLIM2-219ENST00000616289 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
PDLIM2-219ENST00000616289 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms