RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
POLR2E-213ENST00000615234 H0YAA0 97 aa7.79□□□□□ -1.16
POLR2E-213ENST00000615234 MYCBP2O75592 4640 aa7.79□□□□□ -1.16
POLR2E-213ENST00000615234 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
POLR2E-213ENST00000615234 ABCA13Q86UQ4 5058 aa7.76□□□□□ -1.17
POLR2E-213ENST00000615234 A0A1B0GU33 70 aa7.75□□□□□ -1.17
POLR2E-213ENST00000615234 HERC2O95714 4834 aa7.74□□□□□ -1.17
POLR2E-213ENST00000615234 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
POLR2E-213ENST00000615234 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
POLR2E-213ENST00000615234 PCLOQ9Y6V0 5065 aa7.67□□□□□ -1.18
POLR2E-213ENST00000615234 XP32Q5T750 250 aa7.65□□□□□ -1.18
POLR2E-213ENST00000615234 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
POLR2E-213ENST00000615234 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
POLR2E-213ENST00000615234 CSAG1Q6PB30 78 aa7.62□□□□□ -1.19
POLR2E-213ENST00000615234 LINC01554Q52M75 96 aa7.57□□□□□ -1.2
POLR2E-213ENST00000615234 KRTAP10-6P60371 365 aaPredicted RBP7.56□□□□□ -1.2
POLR2E-213ENST00000615234 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
POLR2E-213ENST00000615234 S4R3F8 94 aa7.51□□□□□ -1.21
POLR2E-213ENST00000615234 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
POLR2E-213ENST00000615234 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
POLR2E-213ENST00000615234 K7ERS5 55 aa7.46□□□□□ -1.21
POLR2E-213ENST00000615234 HERC1Q15751 4861 aa7.46□□□□□ -1.22
POLR2E-213ENST00000615234 LPAP08519 4548 aa7.44□□□□□ -1.22
POLR2E-213ENST00000615234 J3QL48 77 aa7.43□□□□□ -1.22
POLR2E-213ENST00000615234 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
POLR2E-213ENST00000615234 LRP2P98164 4655 aa7.4□□□□□ -1.22
POLR2E-213ENST00000615234 P0C880 135 aa7.4□□□□□ -1.23
POLR2E-213ENST00000615234 A0A0D9SG42 100 aa7.38□□□□□ -1.23
POLR2E-213ENST00000615234 H3BS24 57 aa7.37□□□□□ -1.23
POLR2E-213ENST00000615234 TPRXLQ17RH7 258 aa7.35□□□□□ -1.23
POLR2E-213ENST00000615234 CRIPTQ9P021 101 aa7.33□□□□□ -1.24
POLR2E-213ENST00000615234 ROMO1P60602 79 aa7.33□□□□□ -1.24
POLR2E-213ENST00000615234 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
POLR2E-213ENST00000615234 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
POLR2E-213ENST00000615234 M0QZ58 72 aa7.14□□□□□ -1.27
POLR2E-213ENST00000615234 HMCN2Q8NDA2 5059 aa7.13□□□□□ -1.27
POLR2E-213ENST00000615234 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
POLR2E-213ENST00000615234 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
POLR2E-213ENST00000615234 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.28
POLR2E-213ENST00000615234 SEC61BP60468 96 aaKnown RBP7.06□□□□□ -1.28
POLR2E-213ENST00000615234 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
POLR2E-213ENST00000615234 KRTAP4-1Q9BYQ7 146 aa7.02□□□□□ -1.29
POLR2E-213ENST00000615234 MUC2Q02817 5179 aa6.99□□□□□ -1.29
POLR2E-213ENST00000615234 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
POLR2E-213ENST00000615234 A0A0A0MQY5 61 aa6.97□□□□□ -1.29
POLR2E-213ENST00000615234 R4GN34 69 aa6.97□□□□□ -1.29
POLR2E-213ENST00000615234 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
POLR2E-213ENST00000615234 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
POLR2E-213ENST00000615234 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.32
POLR2E-213ENST00000615234 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
POLR2E-213ENST00000615234 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
POLR2E-213ENST00000615234 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
POLR2E-213ENST00000615234 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
POLR2E-213ENST00000615234 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
POLR2E-213ENST00000615234 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
POLR2E-213ENST00000615234 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
POLR2E-213ENST00000615234 TNP1P09430 55 aa6.36□□□□□ -1.39
POLR2E-213ENST00000615234 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
POLR2E-213ENST00000615234 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
POLR2E-213ENST00000615234 M0R2T5 61 aa6.31□□□□□ -1.4
POLR2E-213ENST00000615234 MT1HP80294 61 aa6.3□□□□□ -1.4
POLR2E-213ENST00000615234 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
POLR2E-213ENST00000615234 MT2AP02795 61 aa6.21□□□□□ -1.42
POLR2E-213ENST00000615234 MT1FP04733 61 aa6.21□□□□□ -1.42
POLR2E-213ENST00000615234 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
POLR2E-213ENST00000615234 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
POLR2E-213ENST00000615234 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
POLR2E-213ENST00000615234 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
POLR2E-213ENST00000615234 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
POLR2E-213ENST00000615234 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
POLR2E-213ENST00000615234 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
POLR2E-213ENST00000615234 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
POLR2E-213ENST00000615234 MT1BP07438 61 aa6.01□□□□□ -1.45
POLR2E-213ENST00000615234 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
POLR2E-213ENST00000615234 MT1XP80297 61 aa5.95□□□□□ -1.46
POLR2E-213ENST00000615234 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
POLR2E-213ENST00000615234 USH2AO75445 5202 aa5.9□□□□□ -1.46
POLR2E-213ENST00000615234 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
POLR2E-213ENST00000615234 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
POLR2E-213ENST00000615234 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
POLR2E-213ENST00000615234 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
POLR2E-213ENST00000615234 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
POLR2E-213ENST00000615234 LCE2BO14633 110 aa5.74□□□□□ -1.49
POLR2E-213ENST00000615234 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
POLR2E-213ENST00000615234 SSPOA2VEC9 5147 aa5.66□□□□□ -1.5
POLR2E-213ENST00000615234 LCE2DQ5TA82 110 aaPredicted RBP5.62□□□□□ -1.51
POLR2E-213ENST00000615234 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
POLR2E-213ENST00000615234 KMT2DO14686 5537 aa5.49□□□□□ -1.53
POLR2E-213ENST00000615234 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
POLR2E-213ENST00000615234 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
POLR2E-213ENST00000615234 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
POLR2E-213ENST00000615234 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
POLR2E-213ENST00000615234 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
POLR2E-213ENST00000615234 KRTAP9-6A0A140TA67 174 aa5.37□□□□□ -1.55
POLR2E-213ENST00000615234 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
POLR2E-213ENST00000615234 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
POLR2E-213ENST00000615234 INE1O15225 51 aa5.29□□□□□ -1.56
POLR2E-213ENST00000615234 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
POLR2E-213ENST00000615234 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
POLR2E-213ENST00000615234 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms