RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ACYP2P14621 99 aa1.82□□□□□ -2.12
LIG4-205ENST00000614526 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
LIG4-205ENST00000614526 A8MUN3 132 aa1.82□□□□□ -2.12
LIG4-205ENST00000614526 Q75L30 129 aa1.82□□□□□ -2.12
LIG4-205ENST00000614526 DMAC1Q96GE9 116 aa1.81□□□□□ -2.12
LIG4-205ENST00000614526 PRR15LQ9BU68 103 aa1.81□□□□□ -2.12
LIG4-205ENST00000614526 RPL37P61927 97 aaKnown RBP1.81□□□□□ -2.12
LIG4-205ENST00000614526 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
LIG4-205ENST00000614526 KRTAP4-9Q9BYQ8 210 aa1.8□□□□□ -2.12
LIG4-205ENST00000614526 HERC1Q15751 4861 aa1.8□□□□□ -2.12
LIG4-205ENST00000614526 KRTAP3-1Q9BYR8 98 aa1.8□□□□□ -2.12
LIG4-205ENST00000614526 KRTAP9-6A0A140TA67 174 aa1.79□□□□□ -2.12
LIG4-205ENST00000614526 BRK1Q8WUW1 75 aa1.79□□□□□ -2.12
LIG4-205ENST00000614526 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
LIG4-205ENST00000614526 Q1T7F1 81 aa1.79□□□□□ -2.12
LIG4-205ENST00000614526 MUC2Q02817 5179 aa1.78□□□□□ -2.12
LIG4-205ENST00000614526 A8MU10 97 aa1.78□□□□□ -2.12
LIG4-205ENST00000614526 Q5VV11 94 aa1.78□□□□□ -2.13
LIG4-205ENST00000614526 KRTAP9-9Q9BYP9 154 aa1.78□□□□□ -2.13
LIG4-205ENST00000614526 KRTAP9-4Q9BYQ2 154 aa1.78□□□□□ -2.13
LIG4-205ENST00000614526 TPRXLQ17RH7 258 aa1.77□□□□□ -2.13
LIG4-205ENST00000614526 COX6B2Q6YFQ2 88 aa1.77□□□□□ -2.13
LIG4-205ENST00000614526 V9GYY9 64 aa1.77□□□□□ -2.13
LIG4-205ENST00000614526 A6NED7 52 aa1.76□□□□□ -2.13
LIG4-205ENST00000614526 LINC01558Q9Y6Z2 57 aa1.76□□□□□ -2.13
LIG4-205ENST00000614526 A0A1B0GU69 56 aa1.76□□□□□ -2.13
LIG4-205ENST00000614526 H3BS24 57 aa1.74□□□□□ -2.13
LIG4-205ENST00000614526 LCA10Q71F78 164 aa1.74□□□□□ -2.13
LIG4-205ENST00000614526 SPTSSBQ8NFR3 76 aa1.74□□□□□ -2.13
LIG4-205ENST00000614526 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
LIG4-205ENST00000614526 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
LIG4-205ENST00000614526 SEC61GP60059 68 aa1.72□□□□□ -2.13
LIG4-205ENST00000614526 SEC61BP60468 96 aaKnown RBP1.72□□□□□ -2.13
LIG4-205ENST00000614526 S4R3F8 94 aa1.72□□□□□ -2.13
LIG4-205ENST00000614526 RBM12B-AS1Q9P1G2 102 aa1.72□□□□□ -2.13
LIG4-205ENST00000614526 HMCN2Q8NDA2 5059 aa1.72□□□□□ -2.13
LIG4-205ENST00000614526 PRO0628Q9UI54 55 aa1.71□□□□□ -2.14
LIG4-205ENST00000614526 UBR4Q5T4S7 5183 aa1.71□□□□□ -2.14
LIG4-205ENST00000614526 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
LIG4-205ENST00000614526 H1FX-AS1Q4G0G2 97 aa1.71□□□□□ -2.14
LIG4-205ENST00000614526 MUC17Q685J3 4493 aa1.71□□□□□ -2.14
LIG4-205ENST00000614526 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
LIG4-205ENST00000614526 FAT4Q6V0I7 4981 aa1.7□□□□□ -2.14
LIG4-205ENST00000614526 UQCR11O14957 56 aa1.69□□□□□ -2.14
LIG4-205ENST00000614526 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
LIG4-205ENST00000614526 CDC42SE1Q9NRR8 79 aa1.69□□□□□ -2.14
LIG4-205ENST00000614526 A0A1B0GU33 70 aa1.69□□□□□ -2.14
LIG4-205ENST00000614526 P0C880 135 aa1.68□□□□□ -2.14
LIG4-205ENST00000614526 PMAIP1Q13794 54 aa1.68□□□□□ -2.14
LIG4-205ENST00000614526 ADM2Q7Z4H4 148 aa1.68□□□□□ -2.14
LIG4-205ENST00000614526 A0A0D9SG42 100 aa1.68□□□□□ -2.14
LIG4-205ENST00000614526 CSAG1Q6PB30 78 aa1.68□□□□□ -2.14
LIG4-205ENST00000614526 H0YAA0 97 aa1.67□□□□□ -2.14
LIG4-205ENST00000614526 KRTAP10-6P60371 365 aaPredicted RBP1.67□□□□□ -2.14
LIG4-205ENST00000614526 LCE1DQ5T752 114 aa1.67□□□□□ -2.14
LIG4-205ENST00000614526 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
LIG4-205ENST00000614526 LINC01554Q52M75 96 aa1.65□□□□□ -2.15
LIG4-205ENST00000614526 KRTAP19-2Q3LHN2 52 aa1.65□□□□□ -2.15
LIG4-205ENST00000614526 A6NN06 94 aa1.63□□□□□ -2.15
LIG4-205ENST00000614526 M0R2T5 61 aa1.63□□□□□ -2.15
LIG4-205ENST00000614526 SPINT4Q6UDR6 99 aa1.62□□□□□ -2.15
LIG4-205ENST00000614526 M0QZ58 72 aa1.62□□□□□ -2.15
LIG4-205ENST00000614526 KRTAP5-9P26371 169 aa1.62□□□□□ -2.15
LIG4-205ENST00000614526 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
LIG4-205ENST00000614526 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
LIG4-205ENST00000614526 PRAC1Q96KF2 57 aa1.61□□□□□ -2.15
LIG4-205ENST00000614526 R4GN34 69 aa1.61□□□□□ -2.15
LIG4-205ENST00000614526 CRIPTQ9P021 101 aa1.6□□□□□ -2.15
LIG4-205ENST00000614526 KRTAP19-4Q3LI73 84 aa1.6□□□□□ -2.15
LIG4-205ENST00000614526 K7ERS5 55 aa1.59□□□□□ -2.15
LIG4-205ENST00000614526 KRTAP12-2P59991 146 aa1.59□□□□□ -2.15
LIG4-205ENST00000614526 KTN1-AS1Q86SY8 53 aa1.58□□□□□ -2.16
LIG4-205ENST00000614526 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
LIG4-205ENST00000614526 MT1HP80294 61 aa1.58□□□□□ -2.16
LIG4-205ENST00000614526 KRTAP12-1P59990 96 aa1.57□□□□□ -2.16
LIG4-205ENST00000614526 KRTAP10-10P60014 251 aa1.55□□□□□ -2.16
LIG4-205ENST00000614526 KRTAP23-1A1A580 65 aa1.54□□□□□ -2.16
LIG4-205ENST00000614526 LCE3BQ5TA77 95 aa1.54□□□□□ -2.16
LIG4-205ENST00000614526 ROMO1P60602 79 aa1.54□□□□□ -2.16
LIG4-205ENST00000614526 C10orf95Q9H7T3 257 aa1.54□□□□□ -2.16
LIG4-205ENST00000614526 MT1FP04733 61 aa1.53□□□□□ -2.16
LIG4-205ENST00000614526 MT2AP02795 61 aa1.53□□□□□ -2.16
LIG4-205ENST00000614526 CAMK2N1Q7Z7J9 78 aa1.53□□□□□ -2.16
LIG4-205ENST00000614526 KRTAP19-1Q8IUB9 90 aa1.51□□□□□ -2.17
LIG4-205ENST00000614526 USH2AO75445 5202 aa1.5□□□□□ -2.17
LIG4-205ENST00000614526 KRTAP25-1Q3LHN0 102 aa1.49□□□□□ -2.17
LIG4-205ENST00000614526 PLAC4Q8WY50 150 aa1.48□□□□□ -2.17
LIG4-205ENST00000614526 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
LIG4-205ENST00000614526 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
LIG4-205ENST00000614526 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
LIG4-205ENST00000614526 KRTAP9-3Q9BYQ3 159 aa1.46□□□□□ -2.18
LIG4-205ENST00000614526 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
LIG4-205ENST00000614526 MT1BP07438 61 aa1.44□□□□□ -2.18
LIG4-205ENST00000614526 TNP1P09430 55 aa1.42□□□□□ -2.18
LIG4-205ENST00000614526 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
LIG4-205ENST00000614526 KMT2DO14686 5537 aa1.42□□□□□ -2.18
LIG4-205ENST00000614526 KRTAP10-5P60370 271 aa1.41□□□□□ -2.18
LIG4-205ENST00000614526 MT1XP80297 61 aa1.41□□□□□ -2.18
LIG4-205ENST00000614526 KRTAP10-7P60409 375 aaPredicted RBP1.39□□□□□ -2.19
LIG4-205ENST00000614526 LCE3AQ5TA76 89 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms