RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 A0A1B0GVX0 72 aa3.47□□□□□ -1.85
CBWD3-210ENST00000614398 TPRXLQ17RH7 258 aa3.47□□□□□ -1.85
CBWD3-210ENST00000614398 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
CBWD3-210ENST00000614398 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
CBWD3-210ENST00000614398 CSAG1Q6PB30 78 aa3.45□□□□□ -1.86
CBWD3-210ENST00000614398 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
CBWD3-210ENST00000614398 ROMO1P60602 79 aa3.45□□□□□ -1.86
CBWD3-210ENST00000614398 HRES1P13985 223 aa3.44□□□□□ -1.86
CBWD3-210ENST00000614398 WFDC13Q8IUB5 93 aa3.44□□□□□ -1.86
CBWD3-210ENST00000614398 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
CBWD3-210ENST00000614398 MMP24-AS1A0A0U1RRL7 71 aa3.43□□□□□ -1.86
CBWD3-210ENST00000614398 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
CBWD3-210ENST00000614398 TP53AIP1Q9HCN2 124 aa3.43□□□□□ -1.86
CBWD3-210ENST00000614398 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
CBWD3-210ENST00000614398 DMBT1Q9UGM3 2413 aaPredicted RBP3.42□□□□□ -1.86
CBWD3-210ENST00000614398 A8MUU9 505 aa3.41□□□□□ -1.86
CBWD3-210ENST00000614398 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
CBWD3-210ENST00000614398 LCE3BQ5TA77 95 aa3.4□□□□□ -1.87
CBWD3-210ENST00000614398 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
CBWD3-210ENST00000614398 UQCR11O14957 56 aa3.39□□□□□ -1.87
CBWD3-210ENST00000614398 MRPL34Q9BQ48 92 aaKnown RBP3.39□□□□□ -1.87
CBWD3-210ENST00000614398 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
CBWD3-210ENST00000614398 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CBWD3-210ENST00000614398 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
CBWD3-210ENST00000614398 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
CBWD3-210ENST00000614398 C9orf92A6NGG3 77 aa3.36□□□□□ -1.87
CBWD3-210ENST00000614398 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
CBWD3-210ENST00000614398 A0A1B0GU69 56 aa3.36□□□□□ -1.87
CBWD3-210ENST00000614398 ACYP2P14621 99 aa3.36□□□□□ -1.87
CBWD3-210ENST00000614398 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
CBWD3-210ENST00000614398 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
CBWD3-210ENST00000614398 SEC61BP60468 96 aaKnown RBP3.34□□□□□ -1.88
CBWD3-210ENST00000614398 HERC1Q15751 4861 aa3.33□□□□□ -1.88
CBWD3-210ENST00000614398 P0C880 135 aa3.32□□□□□ -1.88
CBWD3-210ENST00000614398 DMAC1Q96GE9 116 aa3.31□□□□□ -1.88
CBWD3-210ENST00000614398 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
CBWD3-210ENST00000614398 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
CBWD3-210ENST00000614398 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
CBWD3-210ENST00000614398 Q5W150 140 aa3.28□□□□□ -1.88
CBWD3-210ENST00000614398 LPAP08519 4548 aa3.27□□□□□ -1.89
CBWD3-210ENST00000614398 IGKV2-30P06310 120 aa3.26□□□□□ -1.89
CBWD3-210ENST00000614398 LRP2P98164 4655 aa3.25□□□□□ -1.89
CBWD3-210ENST00000614398 KRTAP4-8A0A0G2JLE6 195 aa3.24□□□□□ -1.89
CBWD3-210ENST00000614398 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
CBWD3-210ENST00000614398 IGKV2D-30A0A075B6S6 120 aa3.19□□□□□ -1.9
CBWD3-210ENST00000614398 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
CBWD3-210ENST00000614398 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
CBWD3-210ENST00000614398 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
CBWD3-210ENST00000614398 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
CBWD3-210ENST00000614398 K7ERS5 55 aa3.17□□□□□ -1.9
CBWD3-210ENST00000614398 COX6B2Q6YFQ2 88 aa3.16□□□□□ -1.9
CBWD3-210ENST00000614398 RNF213Q63HN8 5207 aa3.16□□□□□ -1.9
CBWD3-210ENST00000614398 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
CBWD3-210ENST00000614398 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
CBWD3-210ENST00000614398 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
CBWD3-210ENST00000614398 UBR4Q5T4S7 5183 aa3.13□□□□□ -1.91
CBWD3-210ENST00000614398 H0YAA0 97 aa3.13□□□□□ -1.91
CBWD3-210ENST00000614398 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
CBWD3-210ENST00000614398 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
CBWD3-210ENST00000614398 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
CBWD3-210ENST00000614398 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
CBWD3-210ENST00000614398 A0A1B0GU33 70 aa3.07□□□□□ -1.92
CBWD3-210ENST00000614398 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
CBWD3-210ENST00000614398 MT1HP80294 61 aa3.06□□□□□ -1.92
CBWD3-210ENST00000614398 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
CBWD3-210ENST00000614398 S4R3F8 94 aa3.05□□□□□ -1.92
CBWD3-210ENST00000614398 FAT4Q6V0I7 4981 aa3.02□□□□□ -1.93
CBWD3-210ENST00000614398 CRIPTQ9P021 101 aa3.02□□□□□ -1.93
CBWD3-210ENST00000614398 MUC2Q02817 5179 aa3.01□□□□□ -1.93
CBWD3-210ENST00000614398 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
CBWD3-210ENST00000614398 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
CBWD3-210ENST00000614398 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
CBWD3-210ENST00000614398 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
CBWD3-210ENST00000614398 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
CBWD3-210ENST00000614398 M0R2T5 61 aa2.95□□□□□ -1.94
CBWD3-210ENST00000614398 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
CBWD3-210ENST00000614398 MT2AP02795 61 aa2.92□□□□□ -1.94
CBWD3-210ENST00000614398 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
CBWD3-210ENST00000614398 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
CBWD3-210ENST00000614398 MT1FP04733 61 aa2.89□□□□□ -1.95
CBWD3-210ENST00000614398 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
CBWD3-210ENST00000614398 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
CBWD3-210ENST00000614398 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
CBWD3-210ENST00000614398 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
CBWD3-210ENST00000614398 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
CBWD3-210ENST00000614398 M0QZ58 72 aa2.82□□□□□ -1.96
CBWD3-210ENST00000614398 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
CBWD3-210ENST00000614398 KRTAP13-4Q3LI77 160 aa2.79□□□□□ -1.96
CBWD3-210ENST00000614398 PRO2289Q9P1D8 64 aa2.79□□□□□ -1.96
CBWD3-210ENST00000614398 R4GN34 69 aa2.77□□□□□ -1.97
CBWD3-210ENST00000614398 A0A0D9SG42 100 aa2.76□□□□□ -1.97
CBWD3-210ENST00000614398 KRTAP12-2P59991 146 aa2.75□□□□□ -1.97
CBWD3-210ENST00000614398 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
CBWD3-210ENST00000614398 MT1BP07438 61 aa2.73□□□□□ -1.97
CBWD3-210ENST00000614398 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
CBWD3-210ENST00000614398 INE1O15225 51 aa2.69□□□□□ -1.98
CBWD3-210ENST00000614398 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
CBWD3-210ENST00000614398 USH2AO75445 5202 aa2.66□□□□□ -1.98
CBWD3-210ENST00000614398 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
CBWD3-210ENST00000614398 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms