RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
TUBD1-216ENST00000613721 LCE1DQ5T752 114 aa6.65□□□□□ -1.35
TUBD1-216ENST00000613721 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.35
TUBD1-216ENST00000613721 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.35
TUBD1-216ENST00000613721 LCA10Q71F78 164 aa6.64□□□□□ -1.35
TUBD1-216ENST00000613721 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
TUBD1-216ENST00000613721 SPINK7P58062 85 aa6.6□□□□□ -1.35
TUBD1-216ENST00000613721 TNXBP22105 4242 aa6.6□□□□□ -1.35
TUBD1-216ENST00000613721 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
TUBD1-216ENST00000613721 MYCBP2O75592 4640 aa6.54□□□□□ -1.36
TUBD1-216ENST00000613721 A0A1B0GU69 56 aa6.54□□□□□ -1.36
TUBD1-216ENST00000613721 C9orf92A6NGG3 77 aa6.54□□□□□ -1.36
TUBD1-216ENST00000613721 FLG2Q5D862 2391 aaPredicted RBP6.54□□□□□ -1.36
TUBD1-216ENST00000613721 Q5VSD8 79 aa6.54□□□□□ -1.36
TUBD1-216ENST00000613721 A8MUU9 505 aa6.52□□□□□ -1.37
TUBD1-216ENST00000613721 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
TUBD1-216ENST00000613721 Q8N1X5 172 aa6.5□□□□□ -1.37
TUBD1-216ENST00000613721 KRTAP4-9Q9BYQ8 210 aa6.47□□□□□ -1.37
TUBD1-216ENST00000613721 LINC01554Q52M75 96 aa6.45□□□□□ -1.38
TUBD1-216ENST00000613721 UQCR11O14957 56 aa6.41□□□□□ -1.38
TUBD1-216ENST00000613721 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
TUBD1-216ENST00000613721 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
TUBD1-216ENST00000613721 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
TUBD1-216ENST00000613721 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
TUBD1-216ENST00000613721 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
TUBD1-216ENST00000613721 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
TUBD1-216ENST00000613721 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
TUBD1-216ENST00000613721 ABCA13Q86UQ4 5058 aa6.36□□□□□ -1.39
TUBD1-216ENST00000613721 KRTAP4-2Q9BYR5 136 aa6.35□□□□□ -1.39
TUBD1-216ENST00000613721 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
TUBD1-216ENST00000613721 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
TUBD1-216ENST00000613721 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
TUBD1-216ENST00000613721 LPAP08519 4548 aa6.26□□□□□ -1.41
TUBD1-216ENST00000613721 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
TUBD1-216ENST00000613721 RPL37P61927 97 aaKnown RBP6.25□□□□□ -1.41
TUBD1-216ENST00000613721 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
TUBD1-216ENST00000613721 HERC2O95714 4834 aa6.24□□□□□ -1.41
TUBD1-216ENST00000613721 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
TUBD1-216ENST00000613721 A0A1B0GU33 70 aa6.2□□□□□ -1.42
TUBD1-216ENST00000613721 H0YAA0 97 aa6.2□□□□□ -1.42
TUBD1-216ENST00000613721 LRP2P98164 4655 aa6.19□□□□□ -1.42
TUBD1-216ENST00000613721 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
TUBD1-216ENST00000613721 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
TUBD1-216ENST00000613721 CSAG1Q6PB30 78 aa6.15□□□□□ -1.43
TUBD1-216ENST00000613721 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
TUBD1-216ENST00000613721 S4R3F8 94 aa6.08□□□□□ -1.44
TUBD1-216ENST00000613721 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
TUBD1-216ENST00000613721 KRTAP9-7A8MTY7 169 aa6.04□□□□□ -1.44
TUBD1-216ENST00000613721 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
TUBD1-216ENST00000613721 KRTAP10-6P60371 365 aaPredicted RBP6.03□□□□□ -1.44
TUBD1-216ENST00000613721 ROMO1P60602 79 aa6.03□□□□□ -1.44
TUBD1-216ENST00000613721 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
TUBD1-216ENST00000613721 HERC1Q15751 4861 aa6.01□□□□□ -1.45
TUBD1-216ENST00000613721 K7ERS5 55 aa6□□□□□ -1.45
TUBD1-216ENST00000613721 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
TUBD1-216ENST00000613721 P0C880 135 aa5.92□□□□□ -1.46
TUBD1-216ENST00000613721 KRTAP25-1Q3LHN0 102 aa5.91□□□□□ -1.46
TUBD1-216ENST00000613721 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
TUBD1-216ENST00000613721 A0A0D9SG42 100 aa5.9□□□□□ -1.46
TUBD1-216ENST00000613721 MUC2Q02817 5179 aa5.89□□□□□ -1.47
TUBD1-216ENST00000613721 HMCN2Q8NDA2 5059 aa5.87□□□□□ -1.47
TUBD1-216ENST00000613721 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
TUBD1-216ENST00000613721 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
TUBD1-216ENST00000613721 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
TUBD1-216ENST00000613721 CRIPTQ9P021 101 aa5.77□□□□□ -1.49
TUBD1-216ENST00000613721 M0QZ58 72 aa5.76□□□□□ -1.49
TUBD1-216ENST00000613721 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
TUBD1-216ENST00000613721 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
TUBD1-216ENST00000613721 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
TUBD1-216ENST00000613721 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
TUBD1-216ENST00000613721 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
TUBD1-216ENST00000613721 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
TUBD1-216ENST00000613721 R4GN34 69 aa5.65□□□□□ -1.51
TUBD1-216ENST00000613721 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
TUBD1-216ENST00000613721 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
TUBD1-216ENST00000613721 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
TUBD1-216ENST00000613721 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
TUBD1-216ENST00000613721 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.52
TUBD1-216ENST00000613721 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
TUBD1-216ENST00000613721 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
TUBD1-216ENST00000613721 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
TUBD1-216ENST00000613721 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
TUBD1-216ENST00000613721 MT1HP80294 61 aa5.31□□□□□ -1.56
TUBD1-216ENST00000613721 M0R2T5 61 aa5.28□□□□□ -1.56
TUBD1-216ENST00000613721 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
TUBD1-216ENST00000613721 MT1FP04733 61 aa5.16□□□□□ -1.58
TUBD1-216ENST00000613721 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
TUBD1-216ENST00000613721 MT2AP02795 61 aa5.15□□□□□ -1.59
TUBD1-216ENST00000613721 TNP1P09430 55 aa5.14□□□□□ -1.59
TUBD1-216ENST00000613721 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
TUBD1-216ENST00000613721 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
TUBD1-216ENST00000613721 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
TUBD1-216ENST00000613721 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
TUBD1-216ENST00000613721 USH2AO75445 5202 aa4.94□□□□□ -1.62
TUBD1-216ENST00000613721 MT1BP07438 61 aa4.88□□□□□ -1.63
TUBD1-216ENST00000613721 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
TUBD1-216ENST00000613721 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
TUBD1-216ENST00000613721 MT1XP80297 61 aa4.82□□□□□ -1.64
TUBD1-216ENST00000613721 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
TUBD1-216ENST00000613721 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms