RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
NEAT1-204ENST00000612303 LCA10Q71F78 164 aa6.56□□□□□ -1.36
NEAT1-204ENST00000612303 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
NEAT1-204ENST00000612303 MUC2Q02817 5179 aa6.53□□□□□ -1.36
NEAT1-204ENST00000612303 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
NEAT1-204ENST00000612303 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
NEAT1-204ENST00000612303 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
NEAT1-204ENST00000612303 FLGP20930 4061 aaPredicted RBP6.49□□□□□ -1.37
NEAT1-204ENST00000612303 V9GYY9 64 aa6.47□□□□□ -1.37
NEAT1-204ENST00000612303 Q1T7F1 81 aa6.45□□□□□ -1.38
NEAT1-204ENST00000612303 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
NEAT1-204ENST00000612303 MT1HP80294 61 aa6.4□□□□□ -1.38
NEAT1-204ENST00000612303 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
NEAT1-204ENST00000612303 H0YAA0 97 aa6.36□□□□□ -1.39
NEAT1-204ENST00000612303 SEC61GP60059 68 aa6.36□□□□□ -1.39
NEAT1-204ENST00000612303 A0A1B0GU69 56 aa6.35□□□□□ -1.39
NEAT1-204ENST00000612303 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
NEAT1-204ENST00000612303 M0R2T5 61 aa6.32□□□□□ -1.4
NEAT1-204ENST00000612303 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
NEAT1-204ENST00000612303 PSPHP1O15172 72 aa6.28□□□□□ -1.4
NEAT1-204ENST00000612303 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
NEAT1-204ENST00000612303 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
NEAT1-204ENST00000612303 Q5VV11 94 aa6.25□□□□□ -1.41
NEAT1-204ENST00000612303 LCE2AQ5TA79 106 aaPredicted RBP6.23□□□□□ -1.41
NEAT1-204ENST00000612303 P0C880 135 aa6.22□□□□□ -1.41
NEAT1-204ENST00000612303 A0A1B0GU33 70 aa6.2□□□□□ -1.42
NEAT1-204ENST00000612303 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
NEAT1-204ENST00000612303 UQCR11O14957 56 aa6.16□□□□□ -1.42
NEAT1-204ENST00000612303 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
NEAT1-204ENST00000612303 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
NEAT1-204ENST00000612303 M0QZ58 72 aa6.13□□□□□ -1.43
NEAT1-204ENST00000612303 MT2AP02795 61 aa6.12□□□□□ -1.43
NEAT1-204ENST00000612303 A6NED7 52 aa6.11□□□□□ -1.43
NEAT1-204ENST00000612303 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
NEAT1-204ENST00000612303 MT1FP04733 61 aa6.07□□□□□ -1.44
NEAT1-204ENST00000612303 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
NEAT1-204ENST00000612303 R4GN34 69 aa6.07□□□□□ -1.44
NEAT1-204ENST00000612303 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
NEAT1-204ENST00000612303 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
NEAT1-204ENST00000612303 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
NEAT1-204ENST00000612303 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
NEAT1-204ENST00000612303 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
NEAT1-204ENST00000612303 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
NEAT1-204ENST00000612303 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
NEAT1-204ENST00000612303 A8MU10 97 aa5.94□□□□□ -1.46
NEAT1-204ENST00000612303 A0A0D9SG42 100 aa5.91□□□□□ -1.46
NEAT1-204ENST00000612303 A6NN06 94 aa5.91□□□□□ -1.46
NEAT1-204ENST00000612303 LINC01554Q52M75 96 aa5.9□□□□□ -1.46
NEAT1-204ENST00000612303 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
NEAT1-204ENST00000612303 K7ERS5 55 aa5.84□□□□□ -1.47
NEAT1-204ENST00000612303 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
NEAT1-204ENST00000612303 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
NEAT1-204ENST00000612303 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
NEAT1-204ENST00000612303 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
NEAT1-204ENST00000612303 LCE2BO14633 110 aa5.77□□□□□ -1.49
NEAT1-204ENST00000612303 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
NEAT1-204ENST00000612303 MT1BP07438 61 aa5.75□□□□□ -1.49
NEAT1-204ENST00000612303 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
NEAT1-204ENST00000612303 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
NEAT1-204ENST00000612303 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
NEAT1-204ENST00000612303 USH2AO75445 5202 aa5.58□□□□□ -1.52
NEAT1-204ENST00000612303 ROMO1P60602 79 aa5.56□□□□□ -1.52
NEAT1-204ENST00000612303 MT1XP80297 61 aa5.53□□□□□ -1.52
NEAT1-204ENST00000612303 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
NEAT1-204ENST00000612303 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
NEAT1-204ENST00000612303 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
NEAT1-204ENST00000612303 KRTAP9-2Q9BYQ4 174 aa5.5□□□□□ -1.53
NEAT1-204ENST00000612303 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
NEAT1-204ENST00000612303 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
NEAT1-204ENST00000612303 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
NEAT1-204ENST00000612303 TNP1P09430 55 aa5.41□□□□□ -1.54
NEAT1-204ENST00000612303 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
NEAT1-204ENST00000612303 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
NEAT1-204ENST00000612303 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
NEAT1-204ENST00000612303 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
NEAT1-204ENST00000612303 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
NEAT1-204ENST00000612303 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
NEAT1-204ENST00000612303 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
NEAT1-204ENST00000612303 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
NEAT1-204ENST00000612303 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
NEAT1-204ENST00000612303 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
NEAT1-204ENST00000612303 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
NEAT1-204ENST00000612303 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
NEAT1-204ENST00000612303 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
NEAT1-204ENST00000612303 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
NEAT1-204ENST00000612303 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
NEAT1-204ENST00000612303 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
NEAT1-204ENST00000612303 KMT2DO14686 5537 aa4.96□□□□□ -1.62
NEAT1-204ENST00000612303 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
NEAT1-204ENST00000612303 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
NEAT1-204ENST00000612303 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
NEAT1-204ENST00000612303 MT1EP04732 61 aa4.86□□□□□ -1.63
NEAT1-204ENST00000612303 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
NEAT1-204ENST00000612303 KRTAP5-9P26371 169 aa4.84□□□□□ -1.63
NEAT1-204ENST00000612303 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
NEAT1-204ENST00000612303 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
NEAT1-204ENST00000612303 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
NEAT1-204ENST00000612303 MT1LQ93083 61 aa4.75□□□□□ -1.65
NEAT1-204ENST00000612303 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
NEAT1-204ENST00000612303 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms