RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 Q5W150 140 aa4.83□□□□□ -1.64
SMAD4-217ENST00000611848 RNF213Q63HN8 5207 aa4.83□□□□□ -1.64
SMAD4-217ENST00000611848 LOC101927531A0A1B0GV80 90 aa4.83□□□□□ -1.64
SMAD4-217ENST00000611848 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
SMAD4-217ENST00000611848 C9orf92A6NGG3 77 aa4.82□□□□□ -1.64
SMAD4-217ENST00000611848 PCOTHQ58A44 107 aa4.81□□□□□ -1.64
SMAD4-217ENST00000611848 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
SMAD4-217ENST00000611848 Q1T7F1 81 aa4.79□□□□□ -1.64
SMAD4-217ENST00000611848 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
SMAD4-217ENST00000611848 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
SMAD4-217ENST00000611848 SEC61GP60059 68 aa4.77□□□□□ -1.65
SMAD4-217ENST00000611848 MUC2Q02817 5179 aa4.77□□□□□ -1.65
SMAD4-217ENST00000611848 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
SMAD4-217ENST00000611848 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
SMAD4-217ENST00000611848 COA5Q86WW8 74 aa4.75□□□□□ -1.65
SMAD4-217ENST00000611848 RPL37P61927 97 aaKnown RBP4.73□□□□□ -1.65
SMAD4-217ENST00000611848 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
SMAD4-217ENST00000611848 V9GYY9 64 aa4.73□□□□□ -1.65
SMAD4-217ENST00000611848 Q75L30 129 aa4.72□□□□□ -1.65
SMAD4-217ENST00000611848 HRES1P13985 223 aa4.72□□□□□ -1.65
SMAD4-217ENST00000611848 C20orf166-AS1Q96NR2 134 aa4.69□□□□□ -1.66
SMAD4-217ENST00000611848 DMAC1Q96GE9 116 aa4.68□□□□□ -1.66
SMAD4-217ENST00000611848 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
SMAD4-217ENST00000611848 A8MUU9 505 aa4.68□□□□□ -1.66
SMAD4-217ENST00000611848 ACYP2P14621 99 aa4.68□□□□□ -1.66
SMAD4-217ENST00000611848 ATP11AUNQ6ZP68 121 aa4.68□□□□□ -1.66
SMAD4-217ENST00000611848 PSPHP1O15172 72 aa4.65□□□□□ -1.66
SMAD4-217ENST00000611848 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.66
SMAD4-217ENST00000611848 FAT4Q6V0I7 4981 aa4.65□□□□□ -1.67
SMAD4-217ENST00000611848 IGKV2D-30A0A075B6S6 120 aa4.64□□□□□ -1.67
SMAD4-217ENST00000611848 A8MUN3 132 aa4.64□□□□□ -1.67
SMAD4-217ENST00000611848 Q5VV11 94 aa4.64□□□□□ -1.67
SMAD4-217ENST00000611848 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
SMAD4-217ENST00000611848 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
SMAD4-217ENST00000611848 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
SMAD4-217ENST00000611848 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
SMAD4-217ENST00000611848 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
SMAD4-217ENST00000611848 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
SMAD4-217ENST00000611848 CHKB-CPT1BH3BT56 60 aa4.58□□□□□ -1.68
SMAD4-217ENST00000611848 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
SMAD4-217ENST00000611848 SPINK7P58062 85 aa4.54□□□□□ -1.68
SMAD4-217ENST00000611848 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
SMAD4-217ENST00000611848 COX6B2Q6YFQ2 88 aa4.52□□□□□ -1.69
SMAD4-217ENST00000611848 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-217ENST00000611848 A6NED7 52 aa4.5□□□□□ -1.69
SMAD4-217ENST00000611848 LCA10Q71F78 164 aa4.5□□□□□ -1.69
SMAD4-217ENST00000611848 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
SMAD4-217ENST00000611848 A8MU10 97 aa4.48□□□□□ -1.69
SMAD4-217ENST00000611848 A0A1B0GU69 56 aa4.47□□□□□ -1.69
SMAD4-217ENST00000611848 MT1HP80294 61 aa4.47□□□□□ -1.69
SMAD4-217ENST00000611848 RBM12B-AS1Q9P1G2 102 aa4.46□□□□□ -1.69
SMAD4-217ENST00000611848 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
SMAD4-217ENST00000611848 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
SMAD4-217ENST00000611848 M0R2T5 61 aa4.43□□□□□ -1.7
SMAD4-217ENST00000611848 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
SMAD4-217ENST00000611848 UQCR11O14957 56 aa4.39□□□□□ -1.71
SMAD4-217ENST00000611848 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-217ENST00000611848 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
SMAD4-217ENST00000611848 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
SMAD4-217ENST00000611848 A6NN06 94 aa4.35□□□□□ -1.71
SMAD4-217ENST00000611848 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SMAD4-217ENST00000611848 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
SMAD4-217ENST00000611848 S4R3F8 94 aa4.29□□□□□ -1.72
SMAD4-217ENST00000611848 A0A1B0GU33 70 aa4.28□□□□□ -1.72
SMAD4-217ENST00000611848 H0YAA0 97 aa4.27□□□□□ -1.73
SMAD4-217ENST00000611848 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
SMAD4-217ENST00000611848 MT2AP02795 61 aa4.21□□□□□ -1.73
SMAD4-217ENST00000611848 MT1FP04733 61 aa4.17□□□□□ -1.74
SMAD4-217ENST00000611848 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
SMAD4-217ENST00000611848 CSAG1Q6PB30 78 aa4.17□□□□□ -1.74
SMAD4-217ENST00000611848 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
SMAD4-217ENST00000611848 P0C880 135 aa4.15□□□□□ -1.74
SMAD4-217ENST00000611848 KRTAP13-4Q3LI77 160 aa4.14□□□□□ -1.75
SMAD4-217ENST00000611848 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
SMAD4-217ENST00000611848 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
SMAD4-217ENST00000611848 K7ERS5 55 aa4.09□□□□□ -1.76
SMAD4-217ENST00000611848 USH2AO75445 5202 aa4.07□□□□□ -1.76
SMAD4-217ENST00000611848 M0QZ58 72 aa4.06□□□□□ -1.76
SMAD4-217ENST00000611848 A0A0D9SG42 100 aa4.05□□□□□ -1.76
SMAD4-217ENST00000611848 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
SMAD4-217ENST00000611848 SSPOA2VEC9 5147 aa4□□□□□ -1.77
SMAD4-217ENST00000611848 KRTAP12-1P59990 96 aa4□□□□□ -1.77
SMAD4-217ENST00000611848 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
SMAD4-217ENST00000611848 ROMO1P60602 79 aa3.99□□□□□ -1.77
SMAD4-217ENST00000611848 CRIPTQ9P021 101 aa3.98□□□□□ -1.77
SMAD4-217ENST00000611848 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.78
SMAD4-217ENST00000611848 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
SMAD4-217ENST00000611848 R4GN34 69 aa3.95□□□□□ -1.78
SMAD4-217ENST00000611848 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
SMAD4-217ENST00000611848 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
SMAD4-217ENST00000611848 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
SMAD4-217ENST00000611848 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
SMAD4-217ENST00000611848 MT1BP07438 61 aa3.88□□□□□ -1.79
SMAD4-217ENST00000611848 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-217ENST00000611848 NDUFAF8A1L188 74 aa3.84□□□□□ -1.8
SMAD4-217ENST00000611848 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
SMAD4-217ENST00000611848 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
SMAD4-217ENST00000611848 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
SMAD4-217ENST00000611848 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
SMAD4-217ENST00000611848 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 1500.5 ms