RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 KRTAP9-8Q9BYQ0 159 aa10.97□□□□□ -0.65
CBWD3-207ENST00000611426 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.65
CBWD3-207ENST00000611426 USH2AO75445 5202 aa10.9□□□□□ -0.66
CBWD3-207ENST00000611426 HRES1P13985 223 aa10.89□□□□□ -0.67
CBWD3-207ENST00000611426 SPINK7P58062 85 aa10.89□□□□□ -0.67
CBWD3-207ENST00000611426 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
CBWD3-207ENST00000611426 RPS28P62857 69 aaKnown RBP10.84□□□□□ -0.67
CBWD3-207ENST00000611426 MPLKIPQ8TAP9 179 aa10.84□□□□□ -0.67
CBWD3-207ENST00000611426 SSPOA2VEC9 5147 aa10.83□□□□□ -0.68
CBWD3-207ENST00000611426 SERP1Q9Y6X1 66 aa10.82□□□□□ -0.68
CBWD3-207ENST00000611426 MT2AP02795 61 aa10.79□□□□□ -0.68
CBWD3-207ENST00000611426 DMAC1Q96GE9 116 aa10.79□□□□□ -0.68
CBWD3-207ENST00000611426 A8MUN3 132 aa10.73□□□□□ -0.69
CBWD3-207ENST00000611426 MT1FP04733 61 aa10.7□□□□□ -0.7
CBWD3-207ENST00000611426 KRTAP10-10P60014 251 aa10.69□□□□□ -0.7
CBWD3-207ENST00000611426 ACYP2P14621 99 aa10.68□□□□□ -0.7
CBWD3-207ENST00000611426 C4orf26Q17RF5 130 aa10.68□□□□□ -0.7
CBWD3-207ENST00000611426 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.67□□□□□ -0.7
CBWD3-207ENST00000611426 LCE2BO14633 110 aa10.63□□□□□ -0.71
CBWD3-207ENST00000611426 COA5Q86WW8 74 aa10.63□□□□□ -0.71
CBWD3-207ENST00000611426 KRTAP9-3Q9BYQ3 159 aa10.63□□□□□ -0.71
CBWD3-207ENST00000611426 KRTAP3-1Q9BYR8 98 aa10.62□□□□□ -0.71
CBWD3-207ENST00000611426 KRTAP9-7A8MTY7 169 aa10.61□□□□□ -0.71
CBWD3-207ENST00000611426 FCGBPQ9Y6R7 5405 aaPredicted RBP10.61□□□□□ -0.71
CBWD3-207ENST00000611426 KRTAP19-1Q8IUB9 90 aa10.54□□□□□ -0.72
CBWD3-207ENST00000611426 SMIM26A0A096LP01 95 aa10.52□□□□□ -0.72
CBWD3-207ENST00000611426 CHKB-CPT1BH3BT56 60 aa10.43□□□□□ -0.74
CBWD3-207ENST00000611426 H1FX-AS1Q4G0G2 97 aa10.39□□□□□ -0.75
CBWD3-207ENST00000611426 Q1T7F1 81 aa10.35□□□□□ -0.75
CBWD3-207ENST00000611426 SYNE2Q8WXH0 6885 aaKnown RBP10.34□□□□□ -0.75
CBWD3-207ENST00000611426 MACF1Q9UPN3 7388 aaKnown RBP10.34□□□□□ -0.75
CBWD3-207ENST00000611426 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
CBWD3-207ENST00000611426 V9GYY9 64 aa10.33□□□□□ -0.76
CBWD3-207ENST00000611426 KRTAP19-6Q3LI70 58 aa10.28□□□□□ -0.76
CBWD3-207ENST00000611426 S4R3F8 94 aa10.27□□□□□ -0.76
CBWD3-207ENST00000611426 LINC01558Q9Y6Z2 57 aa10.26□□□□□ -0.77
CBWD3-207ENST00000611426 LCA10Q71F78 164 aa10.24□□□□□ -0.77
CBWD3-207ENST00000611426 CSAG1Q6PB30 78 aa10.07□□□□□ -0.8
CBWD3-207ENST00000611426 PRR15LQ9BU68 103 aa10.06□□□□□ -0.8
CBWD3-207ENST00000611426 A0A1B0GU69 56 aa10.03□□□□□ -0.8
CBWD3-207ENST00000611426 PSPHP1O15172 72 aa10.03□□□□□ -0.8
CBWD3-207ENST00000611426 Q5VV11 94 aa10.03□□□□□ -0.8
CBWD3-207ENST00000611426 SEC61GP60059 68 aa9.99□□□□□ -0.81
CBWD3-207ENST00000611426 H0YAA0 97 aa9.96□□□□□ -0.82
CBWD3-207ENST00000611426 KRTAP6-3Q3LI67 103 aa9.92□□□□□ -0.82
CBWD3-207ENST00000611426 ADM2Q7Z4H4 148 aa9.78□□□□□ -0.84
CBWD3-207ENST00000611426 A6NN06 94 aa9.77□□□□□ -0.84
CBWD3-207ENST00000611426 UQCR11O14957 56 aa9.76□□□□□ -0.85
CBWD3-207ENST00000611426 MT1BP07438 61 aa9.76□□□□□ -0.85
CBWD3-207ENST00000611426 A0A1B0GU33 70 aa9.75□□□□□ -0.85
CBWD3-207ENST00000611426 A6NED7 52 aa9.75□□□□□ -0.85
CBWD3-207ENST00000611426 P0C880 135 aa9.75□□□□□ -0.85
CBWD3-207ENST00000611426 SPRR2GQ9BYE4 73 aa9.75□□□□□ -0.85
CBWD3-207ENST00000611426 KRTAP19-8Q3LI54 63 aa9.72□□□□□ -0.85
CBWD3-207ENST00000611426 LOC100996750A0A140TA64 210 aa9.68□□□□□ -0.86
CBWD3-207ENST00000611426 KRTAP4-6Q9BYQ5 205 aa9.68□□□□□ -0.86
CBWD3-207ENST00000611426 NEBP20929 6669 aa9.67□□□□□ -0.86
CBWD3-207ENST00000611426 SPATA8Q6RVD6 105 aa9.67□□□□□ -0.86
CBWD3-207ENST00000611426 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
CBWD3-207ENST00000611426 MIR22HGQ0VDD5 57 aa9.63□□□□□ -0.87
CBWD3-207ENST00000611426 MUC12Q9UKN1 5478 aa9.61□□□□□ -0.87
CBWD3-207ENST00000611426 BRK1Q8WUW1 75 aa9.61□□□□□ -0.87
CBWD3-207ENST00000611426 M0QZ58 72 aa9.59□□□□□ -0.87
CBWD3-207ENST00000611426 KRTAP10-5P60370 271 aa9.59□□□□□ -0.87
CBWD3-207ENST00000611426 KRTAP13-4Q3LI77 160 aa9.55□□□□□ -0.88
CBWD3-207ENST00000611426 CRIPTQ9P021 101 aa9.53□□□□□ -0.88
CBWD3-207ENST00000611426 A8MU10 97 aa9.5□□□□□ -0.89
CBWD3-207ENST00000611426 PRO0628Q9UI54 55 aa9.49□□□□□ -0.89
CBWD3-207ENST00000611426 R4GN34 69 aa9.45□□□□□ -0.9
CBWD3-207ENST00000611426 KRTAP5-9P26371 169 aa9.37□□□□□ -0.91
CBWD3-207ENST00000611426 MDN1Q9NU22 5596 aa9.35□□□□□ -0.91
CBWD3-207ENST00000611426 KMT2DO14686 5537 aa9.34□□□□□ -0.91
CBWD3-207ENST00000611426 KRTAP20-1Q3LI63 56 aa9.29□□□□□ -0.92
CBWD3-207ENST00000611426 A0A0D9SG42 100 aa9.27□□□□□ -0.93
CBWD3-207ENST00000611426 KRTAP12-1P59990 96 aa9.22□□□□□ -0.93
CBWD3-207ENST00000611426 K7ERS5 55 aa9.21□□□□□ -0.94
CBWD3-207ENST00000611426 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
CBWD3-207ENST00000611426 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
CBWD3-207ENST00000611426 KRTAP12-2P59991 146 aa9.15□□□□□ -0.94
CBWD3-207ENST00000611426 PLAC4Q8WY50 150 aa9.13□□□□□ -0.95
CBWD3-207ENST00000611426 MT1XP80297 61 aa9.11□□□□□ -0.95
CBWD3-207ENST00000611426 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
CBWD3-207ENST00000611426 SPINT4Q6UDR6 99 aa9.07□□□□□ -0.96
CBWD3-207ENST00000611426 SPRR2FQ96RM1 72 aa9.07□□□□□ -0.96
CBWD3-207ENST00000611426 KRTAP2-3P0C7H8 128 aa9□□□□□ -0.97
CBWD3-207ENST00000611426 KRTAP2-4Q9BYR9 128 aa9□□□□□ -0.97
CBWD3-207ENST00000611426 SPRR2EP22531 72 aa8.99□□□□□ -0.97
CBWD3-207ENST00000611426 SPRR2BP35325 72 aa8.99□□□□□ -0.97
CBWD3-207ENST00000611426 SPRR2AP35326 72 aa8.99□□□□□ -0.97
CBWD3-207ENST00000611426 KRTAP8-1Q8IUC2 63 aa8.98□□□□□ -0.97
CBWD3-207ENST00000611426 ROMO1P60602 79 aa8.83□□□□□ -1
CBWD3-207ENST00000611426 LCE1AQ5T7P2 110 aa8.82□□□□□ -1
CBWD3-207ENST00000611426 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
CBWD3-207ENST00000611426 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
CBWD3-207ENST00000611426 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
CBWD3-207ENST00000611426 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
CBWD3-207ENST00000611426 C10orf95Q9H7T3 257 aa8.72□□□□□ -1.01
CBWD3-207ENST00000611426 KRTAP2-2Q9BYT5 123 aa8.71□□□□□ -1.02
CBWD3-207ENST00000611426 KRTAP2-1Q9BYU5 128 aa8.71□□□□□ -1.02
CBWD3-207ENST00000611426 SPRR2DP22532 72 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms