RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 COX6B2Q6YFQ2 88 aa11.46□□□□□ -0.57
UBE3C-209ENST00000611269 BRK1Q8WUW1 75 aa11.46□□□□□ -0.57
UBE3C-209ENST00000611269 MUC2Q02817 5179 aa11.44□□□□□ -0.58
UBE3C-209ENST00000611269 PRO0628Q9UI54 55 aa11.43□□□□□ -0.58
UBE3C-209ENST00000611269 RNF213Q63HN8 5207 aa11.4□□□□□ -0.58
UBE3C-209ENST00000611269 SPTSSBQ8NFR3 76 aa11.37□□□□□ -0.59
UBE3C-209ENST00000611269 SVIPQ8NHG7 77 aa11.36□□□□□ -0.59
UBE3C-209ENST00000611269 A0A1B0GU69 56 aa11.33□□□□□ -0.6
UBE3C-209ENST00000611269 A6NED7 52 aa11.31□□□□□ -0.6
UBE3C-209ENST00000611269 LCA10Q71F78 164 aa11.21□□□□□ -0.61
UBE3C-209ENST00000611269 CDC42SE1Q9NRR8 79 aa11.19□□□□□ -0.62
UBE3C-209ENST00000611269 A8MU10 97 aa11.16□□□□□ -0.62
UBE3C-209ENST00000611269 SEC61GP60059 68 aa11.16□□□□□ -0.62
UBE3C-209ENST00000611269 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
UBE3C-209ENST00000611269 KRTAP19-2Q3LHN2 52 aa11.11□□□□□ -0.63
UBE3C-209ENST00000611269 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
UBE3C-209ENST00000611269 UQCR11O14957 56 aa11.07□□□□□ -0.64
UBE3C-209ENST00000611269 H1FX-AS1Q4G0G2 97 aa11.07□□□□□ -0.64
UBE3C-209ENST00000611269 S4R3F8 94 aa11.05□□□□□ -0.64
UBE3C-209ENST00000611269 SPATA8Q6RVD6 105 aa11.03□□□□□ -0.64
UBE3C-209ENST00000611269 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
UBE3C-209ENST00000611269 FAT4Q6V0I7 4981 aa10.98□□□□□ -0.65
UBE3C-209ENST00000611269 MIR22HGQ0VDD5 57 aa10.97□□□□□ -0.65
UBE3C-209ENST00000611269 FLGP20930 4061 aaPredicted RBP10.91□□□□□ -0.66
UBE3C-209ENST00000611269 A0A1B0GU33 70 aa10.89□□□□□ -0.67
UBE3C-209ENST00000611269 PMAIP1Q13794 54 aa10.87□□□□□ -0.67
UBE3C-209ENST00000611269 MT1HP80294 61 aa10.83□□□□□ -0.68
UBE3C-209ENST00000611269 KRTAP10-6P60371 365 aaPredicted RBP10.8□□□□□ -0.68
UBE3C-209ENST00000611269 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
UBE3C-209ENST00000611269 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
UBE3C-209ENST00000611269 A6NN06 94 aa10.77□□□□□ -0.69
UBE3C-209ENST00000611269 H0YAA0 97 aa10.77□□□□□ -0.69
UBE3C-209ENST00000611269 M0R2T5 61 aa10.7□□□□□ -0.7
UBE3C-209ENST00000611269 LCE2AQ5TA79 106 aaPredicted RBP10.68□□□□□ -0.7
UBE3C-209ENST00000611269 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
UBE3C-209ENST00000611269 P0C880 135 aa10.62□□□□□ -0.71
UBE3C-209ENST00000611269 KRTAP13-4Q3LI77 160 aa10.53□□□□□ -0.72
UBE3C-209ENST00000611269 KTN1-AS1Q86SY8 53 aa10.52□□□□□ -0.73
UBE3C-209ENST00000611269 LORP23490 312 aaPredicted RBP10.44□□□□□ -0.74
UBE3C-209ENST00000611269 M0QZ58 72 aa10.4□□□□□ -0.75
UBE3C-209ENST00000611269 K7ERS5 55 aa10.39□□□□□ -0.75
UBE3C-209ENST00000611269 KRTAP9-8Q9BYQ0 159 aa10.36□□□□□ -0.75
UBE3C-209ENST00000611269 A0A0D9SG42 100 aa10.35□□□□□ -0.75
UBE3C-209ENST00000611269 MT2AP02795 61 aa10.3□□□□□ -0.76
UBE3C-209ENST00000611269 MT1FP04733 61 aa10.23□□□□□ -0.77
UBE3C-209ENST00000611269 KRTAP10-10P60014 251 aa10.2□□□□□ -0.78
UBE3C-209ENST00000611269 R4GN34 69 aa10.2□□□□□ -0.78
UBE3C-209ENST00000611269 KRTAP12-1P59990 96 aa10.17□□□□□ -0.78
UBE3C-209ENST00000611269 KRTAP12-2P59991 146 aa10.15□□□□□ -0.78
UBE3C-209ENST00000611269 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
UBE3C-209ENST00000611269 SPINT4Q6UDR6 99 aa10.08□□□□□ -0.8
UBE3C-209ENST00000611269 ROMO1P60602 79 aa10.04□□□□□ -0.8
UBE3C-209ENST00000611269 LINC01554Q52M75 96 aa10.02□□□□□ -0.8
UBE3C-209ENST00000611269 KRTAP9-3Q9BYQ3 159 aa10□□□□□ -0.81
UBE3C-209ENST00000611269 CRIPTQ9P021 101 aa10□□□□□ -0.81
UBE3C-209ENST00000611269 KRTAP19-1Q8IUB9 90 aa9.9□□□□□ -0.82
UBE3C-209ENST00000611269 SPRR2GQ9BYE4 73 aa9.88□□□□□ -0.83
UBE3C-209ENST00000611269 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
UBE3C-209ENST00000611269 LCE2DQ5TA82 110 aaPredicted RBP9.83□□□□□ -0.84
UBE3C-209ENST00000611269 LCE2BO14633 110 aa9.8□□□□□ -0.84
UBE3C-209ENST00000611269 KRTAP9-2Q9BYQ4 174 aa9.68□□□□□ -0.86
UBE3C-209ENST00000611269 KRTAP19-8Q3LI54 63 aa9.68□□□□□ -0.86
UBE3C-209ENST00000611269 USH2AO75445 5202 aa9.63□□□□□ -0.87
UBE3C-209ENST00000611269 C10orf95Q9H7T3 257 aa9.61□□□□□ -0.87
UBE3C-209ENST00000611269 CAMK2N1Q7Z7J9 78 aa9.6□□□□□ -0.87
UBE3C-209ENST00000611269 MT1BP07438 61 aa9.59□□□□□ -0.87
UBE3C-209ENST00000611269 FSIP2Q5CZC0 6907 aa9.56□□□□□ -0.88
UBE3C-209ENST00000611269 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
UBE3C-209ENST00000611269 SSPOA2VEC9 5147 aa9.39□□□□□ -0.91
UBE3C-209ENST00000611269 KRTAP19-6Q3LI70 58 aa9.28□□□□□ -0.92
UBE3C-209ENST00000611269 CRCT1Q9UGL9 99 aa9.27□□□□□ -0.93
UBE3C-209ENST00000611269 TNP1P09430 55 aa9.22□□□□□ -0.93
UBE3C-209ENST00000611269 MT1XP80297 61 aa9.21□□□□□ -0.94
UBE3C-209ENST00000611269 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
UBE3C-209ENST00000611269 PP632Q6XCG6 107 aa9.18□□□□□ -0.94
UBE3C-209ENST00000611269 PRO2289Q9P1D8 64 aa9.13□□□□□ -0.95
UBE3C-209ENST00000611269 KRTAP23-1A1A580 65 aa9.1□□□□□ -0.95
UBE3C-209ENST00000611269 FCGBPQ9Y6R7 5405 aaPredicted RBP9.06□□□□□ -0.96
UBE3C-209ENST00000611269 KRTAP9-6A0A140TA67 174 aa9.06□□□□□ -0.96
UBE3C-209ENST00000611269 KRTAP10-7P60409 375 aaPredicted RBP8.82□□□□□ -1
UBE3C-209ENST00000611269 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
UBE3C-209ENST00000611269 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
UBE3C-209ENST00000611269 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
UBE3C-209ENST00000611269 MACF1Q9UPN3 7388 aaKnown RBP8.7□□□□□ -1.02
UBE3C-209ENST00000611269 KMT2DO14686 5537 aa8.63□□□□□ -1.03
UBE3C-209ENST00000611269 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
UBE3C-209ENST00000611269 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
UBE3C-209ENST00000611269 KRTAP4-8A0A0G2JLE6 195 aa8.59□□□□□ -1.03
UBE3C-209ENST00000611269 KRTAP4-8Q9BYQ9 185 aa8.59□□□□□ -1.03
UBE3C-209ENST00000611269 SYNE2Q8WXH0 6885 aaKnown RBP8.51□□□□□ -1.05
UBE3C-209ENST00000611269 KRTAP12-3P60328 96 aa8.4□□□□□ -1.06
UBE3C-209ENST00000611269 SPRR5A0A1B0GTR4 108 aa8.32□□□□□ -1.08
UBE3C-209ENST00000611269 KRTAP6-3Q3LI67 103 aa8.26□□□□□ -1.09
UBE3C-209ENST00000611269 NDUFAF8A1L188 74 aa8.26□□□□□ -1.09
UBE3C-209ENST00000611269 KRTAP9-7A8MTY7 169 aa8.25□□□□□ -1.09
UBE3C-209ENST00000611269 KRTAP5-9P26371 169 aa8.24□□□□□ -1.09
UBE3C-209ENST00000611269 KRTAP19-5Q3LI72 72 aa8.23□□□□□ -1.09
UBE3C-209ENST00000611269 SPRR2FQ96RM1 72 aa8.23□□□□□ -1.09
UBE3C-209ENST00000611269 KRTAP19-7Q3SYF9 63 aa8.21□□□□□ -1.09
UBE3C-209ENST00000611269 LUZP6Q538Z0 58 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms