RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 FAM240AA0A1B0GVK7 77 aa4.75□□□□□ -1.65
CTSA-215ENST00000607187 C5orf47Q569G3 176 aa4.75□□□□□ -1.65
CTSA-215ENST00000607187 USH2AO75445 5202 aa4.72□□□□□ -1.65
CTSA-215ENST00000607187 ATP5EP2Q5VTU8 51 aa4.71□□□□□ -1.66
CTSA-215ENST00000607187 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
CTSA-215ENST00000607187 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
CTSA-215ENST00000607187 C1orf64Q8NEQ6 169 aa4.68□□□□□ -1.66
CTSA-215ENST00000607187 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
CTSA-215ENST00000607187 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
CTSA-215ENST00000607187 A0A1B0GV90 55 aa4.67□□□□□ -1.66
CTSA-215ENST00000607187 HIST1H4AP62805 103 aaKnown RBP4.66□□□□□ -1.66
CTSA-215ENST00000607187 CYP4F30PQ9H0H9 118 aa4.66□□□□□ -1.66
CTSA-215ENST00000607187 TRAV22A0A0B4J277 110 aa4.65□□□□□ -1.67
CTSA-215ENST00000607187 MT3P25713 68 aa4.65□□□□□ -1.67
CTSA-215ENST00000607187 LINC00643Q86TS7 51 aa4.65□□□□□ -1.67
CTSA-215ENST00000607187 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
CTSA-215ENST00000607187 S4R3F8 94 aa4.65□□□□□ -1.67
CTSA-215ENST00000607187 LOC101927531A0A1B0GV80 90 aa4.63□□□□□ -1.67
CTSA-215ENST00000607187 UQCRQO14949 82 aa4.62□□□□□ -1.67
CTSA-215ENST00000607187 LCA10Q71F78 164 aa4.62□□□□□ -1.67
CTSA-215ENST00000607187 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
CTSA-215ENST00000607187 A0A087WVE0 104 aa4.61□□□□□ -1.67
CTSA-215ENST00000607187 CSAG1Q6PB30 78 aa4.61□□□□□ -1.67
CTSA-215ENST00000607187 H0Y9P7 68 aa4.59□□□□□ -1.67
CTSA-215ENST00000607187 ATOX1O00244 68 aa4.59□□□□□ -1.67
CTSA-215ENST00000607187 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
CTSA-215ENST00000607187 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
CTSA-215ENST00000607187 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
CTSA-215ENST00000607187 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
CTSA-215ENST00000607187 PSPHP1O15172 72 aa4.56□□□□□ -1.68
CTSA-215ENST00000607187 J3QR89 54 aa4.55□□□□□ -1.68
CTSA-215ENST00000607187 LINC00208Q96KT6 92 aa4.52□□□□□ -1.69
CTSA-215ENST00000607187 MP68P56378 58 aa4.5□□□□□ -1.69
CTSA-215ENST00000607187 KLKP1Q107X0 134 aa4.5□□□□□ -1.69
CTSA-215ENST00000607187 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
CTSA-215ENST00000607187 A8MUN3 132 aa4.49□□□□□ -1.69
CTSA-215ENST00000607187 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
CTSA-215ENST00000607187 NDUFC1O43677 76 aa4.47□□□□□ -1.69
CTSA-215ENST00000607187 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
CTSA-215ENST00000607187 MT1BP07438 61 aa4.46□□□□□ -1.7
CTSA-215ENST00000607187 H3BPC8 53 aa4.45□□□□□ -1.7
CTSA-215ENST00000607187 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
CTSA-215ENST00000607187 IMUPQ9GZP8 106 aa4.45□□□□□ -1.7
CTSA-215ENST00000607187 Q5VV11 94 aa4.44□□□□□ -1.7
CTSA-215ENST00000607187 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
CTSA-215ENST00000607187 H0YAA0 97 aa4.43□□□□□ -1.7
CTSA-215ENST00000607187 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
CTSA-215ENST00000607187 K7ERU9 68 aa4.4□□□□□ -1.71
CTSA-215ENST00000607187 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
CTSA-215ENST00000607187 MT-ATP8P03928 68 aa4.39□□□□□ -1.71
CTSA-215ENST00000607187 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
CTSA-215ENST00000607187 A6NN06 94 aa4.37□□□□□ -1.71
CTSA-215ENST00000607187 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
CTSA-215ENST00000607187 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
CTSA-215ENST00000607187 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
CTSA-215ENST00000607187 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
CTSA-215ENST00000607187 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
CTSA-215ENST00000607187 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
CTSA-215ENST00000607187 SMIM20Q8N5G0 67 aa4.34□□□□□ -1.71
CTSA-215ENST00000607187 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
CTSA-215ENST00000607187 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
CTSA-215ENST00000607187 P0C880 135 aa4.29□□□□□ -1.72
CTSA-215ENST00000607187 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
CTSA-215ENST00000607187 ACYP2P14621 99 aa4.28□□□□□ -1.72
CTSA-215ENST00000607187 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
CTSA-215ENST00000607187 R4GN34 69 aa4.26□□□□□ -1.73
CTSA-215ENST00000607187 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
CTSA-215ENST00000607187 M0QZ58 72 aa4.22□□□□□ -1.73
CTSA-215ENST00000607187 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
CTSA-215ENST00000607187 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
CTSA-215ENST00000607187 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
CTSA-215ENST00000607187 MT1XP80297 61 aa4.2□□□□□ -1.74
CTSA-215ENST00000607187 SPANXA2-OT1Q8N9U9 137 aa4.2□□□□□ -1.74
CTSA-215ENST00000607187 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
CTSA-215ENST00000607187 CHKB-CPT1BH3BT56 60 aa4.18□□□□□ -1.74
CTSA-215ENST00000607187 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
CTSA-215ENST00000607187 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
CTSA-215ENST00000607187 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
CTSA-215ENST00000607187 K7ERS5 55 aa4.09□□□□□ -1.75
CTSA-215ENST00000607187 COX7CP15954 63 aa4.09□□□□□ -1.75
CTSA-215ENST00000607187 A8MU10 97 aa4.08□□□□□ -1.76
CTSA-215ENST00000607187 NEBP20929 6669 aa4.08□□□□□ -1.76
CTSA-215ENST00000607187 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
CTSA-215ENST00000607187 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
CTSA-215ENST00000607187 KMT2DO14686 5537 aa4.08□□□□□ -1.76
CTSA-215ENST00000607187 COA5Q86WW8 74 aa4.06□□□□□ -1.76
CTSA-215ENST00000607187 CYSTM1Q9H1C7 97 aa4.03□□□□□ -1.76
CTSA-215ENST00000607187 H7BZZ5 65 aa4.02□□□□□ -1.77
CTSA-215ENST00000607187 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
CTSA-215ENST00000607187 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
CTSA-215ENST00000607187 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
CTSA-215ENST00000607187 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
CTSA-215ENST00000607187 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
CTSA-215ENST00000607187 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
CTSA-215ENST00000607187 A6NED7 52 aa3.98□□□□□ -1.77
CTSA-215ENST00000607187 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
CTSA-215ENST00000607187 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
CTSA-215ENST00000607187 SERP1Q9Y6X1 66 aa3.96□□□□□ -1.78
CTSA-215ENST00000607187 SPRR2EP22531 72 aa3.94□□□□□ -1.78
CTSA-215ENST00000607187 SPRR2BP35325 72 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms