RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 A0A1B0GU69 56 aa3.96□□□□□ -1.78
CDC40-207ENST00000606893 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
CDC40-207ENST00000606893 P0C880 135 aa3.95□□□□□ -1.78
CDC40-207ENST00000606893 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
CDC40-207ENST00000606893 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
CDC40-207ENST00000606893 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
CDC40-207ENST00000606893 UQCR11O14957 56 aa3.91□□□□□ -1.78
CDC40-207ENST00000606893 TP53AIP1Q9HCN2 124 aa3.9□□□□□ -1.78
CDC40-207ENST00000606893 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
CDC40-207ENST00000606893 LRP2P98164 4655 aa3.88□□□□□ -1.79
CDC40-207ENST00000606893 ACYP2P14621 99 aa3.88□□□□□ -1.79
CDC40-207ENST00000606893 A8MUU9 505 aa3.87□□□□□ -1.79
CDC40-207ENST00000606893 LPAP08519 4548 aa3.87□□□□□ -1.79
CDC40-207ENST00000606893 RPS29P62273 56 aaKnown RBP3.86□□□□□ -1.79
CDC40-207ENST00000606893 RNF213Q63HN8 5207 aa3.86□□□□□ -1.79
CDC40-207ENST00000606893 A0A0D9SG42 100 aa3.85□□□□□ -1.79
CDC40-207ENST00000606893 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
CDC40-207ENST00000606893 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.79
CDC40-207ENST00000606893 MUC2Q02817 5179 aa3.84□□□□□ -1.79
CDC40-207ENST00000606893 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
CDC40-207ENST00000606893 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
CDC40-207ENST00000606893 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
CDC40-207ENST00000606893 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
CDC40-207ENST00000606893 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
CDC40-207ENST00000606893 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
CDC40-207ENST00000606893 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
CDC40-207ENST00000606893 H0YAA0 97 aa3.74□□□□□ -1.81
CDC40-207ENST00000606893 KRTAP13-3Q3SY46 172 aa3.74□□□□□ -1.81
CDC40-207ENST00000606893 TNXBP22105 4242 aa3.73□□□□□ -1.81
CDC40-207ENST00000606893 LCE2AQ5TA79 106 aaPredicted RBP3.71□□□□□ -1.82
CDC40-207ENST00000606893 LCE2BO14633 110 aa3.68□□□□□ -1.82
CDC40-207ENST00000606893 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
CDC40-207ENST00000606893 A0A1B0GU33 70 aa3.66□□□□□ -1.82
CDC40-207ENST00000606893 SEC61BP60468 96 aaKnown RBP3.66□□□□□ -1.82
CDC40-207ENST00000606893 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
CDC40-207ENST00000606893 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
CDC40-207ENST00000606893 XP32Q5T750 250 aa3.65□□□□□ -1.83
CDC40-207ENST00000606893 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.83
CDC40-207ENST00000606893 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
CDC40-207ENST00000606893 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
CDC40-207ENST00000606893 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
CDC40-207ENST00000606893 HMCN2Q8NDA2 5059 aa3.63□□□□□ -1.83
CDC40-207ENST00000606893 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
CDC40-207ENST00000606893 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
CDC40-207ENST00000606893 COX6B2Q6YFQ2 88 aa3.6□□□□□ -1.83
CDC40-207ENST00000606893 K7ERS5 55 aa3.58□□□□□ -1.84
CDC40-207ENST00000606893 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
CDC40-207ENST00000606893 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
CDC40-207ENST00000606893 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
CDC40-207ENST00000606893 M0R2T5 61 aa3.53□□□□□ -1.84
CDC40-207ENST00000606893 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
CDC40-207ENST00000606893 S4R3F8 94 aa3.52□□□□□ -1.85
CDC40-207ENST00000606893 LORP23490 312 aaPredicted RBP3.45□□□□□ -1.86
CDC40-207ENST00000606893 M0QZ58 72 aa3.44□□□□□ -1.86
CDC40-207ENST00000606893 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
CDC40-207ENST00000606893 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
CDC40-207ENST00000606893 R4GN34 69 aa3.41□□□□□ -1.86
CDC40-207ENST00000606893 LCE2CQ5TA81 110 aa3.34□□□□□ -1.88
CDC40-207ENST00000606893 CAMK2N1Q7Z7J9 78 aa3.34□□□□□ -1.88
CDC40-207ENST00000606893 MUC17Q685J3 4493 aa3.33□□□□□ -1.88
CDC40-207ENST00000606893 USH2AO75445 5202 aa3.31□□□□□ -1.88
CDC40-207ENST00000606893 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
CDC40-207ENST00000606893 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
CDC40-207ENST00000606893 MT1HP80294 61 aa3.27□□□□□ -1.89
CDC40-207ENST00000606893 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
CDC40-207ENST00000606893 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
CDC40-207ENST00000606893 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
CDC40-207ENST00000606893 FLGP20930 4061 aaPredicted RBP3.17□□□□□ -1.9
CDC40-207ENST00000606893 MT1FP04733 61 aa3.14□□□□□ -1.91
CDC40-207ENST00000606893 MT2AP02795 61 aa3.12□□□□□ -1.91
CDC40-207ENST00000606893 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
CDC40-207ENST00000606893 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
CDC40-207ENST00000606893 KRTAP9-8Q9BYQ0 159 aa3.09□□□□□ -1.91
CDC40-207ENST00000606893 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
CDC40-207ENST00000606893 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
CDC40-207ENST00000606893 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
CDC40-207ENST00000606893 PRO2289Q9P1D8 64 aa3.06□□□□□ -1.92
CDC40-207ENST00000606893 KMT2DO14686 5537 aa3.04□□□□□ -1.92
CDC40-207ENST00000606893 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
CDC40-207ENST00000606893 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
CDC40-207ENST00000606893 TNP1P09430 55 aa2.99□□□□□ -1.93
CDC40-207ENST00000606893 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
CDC40-207ENST00000606893 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
CDC40-207ENST00000606893 KRTAP9-3Q9BYQ3 159 aa2.96□□□□□ -1.94
CDC40-207ENST00000606893 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
CDC40-207ENST00000606893 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
CDC40-207ENST00000606893 SPRR2GQ9BYE4 73 aa2.95□□□□□ -1.94
CDC40-207ENST00000606893 KRTAP4-7Q9BYR0 210 aa2.94□□□□□ -1.94
CDC40-207ENST00000606893 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
CDC40-207ENST00000606893 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
CDC40-207ENST00000606893 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
CDC40-207ENST00000606893 LCE1DQ5T752 114 aa2.91□□□□□ -1.94
CDC40-207ENST00000606893 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.94
CDC40-207ENST00000606893 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
CDC40-207ENST00000606893 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
CDC40-207ENST00000606893 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
CDC40-207ENST00000606893 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
CDC40-207ENST00000606893 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
CDC40-207ENST00000606893 MT1BP07438 61 aa2.87□□□□□ -1.95
CDC40-207ENST00000606893 CRCT1Q9UGL9 99 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms