RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 FAM236AA0A1B0GUQ0 79 aa5.87□□□□□ -1.47
CTSA-210ENST00000606000 FAM236BA0A1B0GV22 79 aa5.87□□□□□ -1.47
CTSA-210ENST00000606000 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
CTSA-210ENST00000606000 H3BS24 57 aa5.85□□□□□ -1.47
CTSA-210ENST00000606000 ATOX1O00244 68 aa5.84□□□□□ -1.47
CTSA-210ENST00000606000 UQCRQO14949 82 aa5.84□□□□□ -1.47
CTSA-210ENST00000606000 C4orf26Q17RF5 130 aa5.83□□□□□ -1.48
CTSA-210ENST00000606000 COX7CP15954 63 aa5.82□□□□□ -1.48
CTSA-210ENST00000606000 KRTAP4-2Q9BYR5 136 aa5.81□□□□□ -1.48
CTSA-210ENST00000606000 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
CTSA-210ENST00000606000 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
CTSA-210ENST00000606000 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
CTSA-210ENST00000606000 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
CTSA-210ENST00000606000 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
CTSA-210ENST00000606000 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
CTSA-210ENST00000606000 TRAV22A0A0B4J277 110 aa5.73□□□□□ -1.49
CTSA-210ENST00000606000 C5orf47Q569G3 176 aa5.72□□□□□ -1.49
CTSA-210ENST00000606000 H0Y9P7 68 aa5.71□□□□□ -1.5
CTSA-210ENST00000606000 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
CTSA-210ENST00000606000 RPS28P62857 69 aaKnown RBP5.69□□□□□ -1.5
CTSA-210ENST00000606000 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
CTSA-210ENST00000606000 SMIM20Q8N5G0 67 aa5.69□□□□□ -1.5
CTSA-210ENST00000606000 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
CTSA-210ENST00000606000 TMEM258P61165 79 aa5.68□□□□□ -1.5
CTSA-210ENST00000606000 CYSTM1Q9H1C7 97 aa5.68□□□□□ -1.5
CTSA-210ENST00000606000 S4R3F8 94 aa5.68□□□□□ -1.5
CTSA-210ENST00000606000 TRAV7A0A075B6U4 112 aa5.67□□□□□ -1.5
CTSA-210ENST00000606000 LCA10Q71F78 164 aa5.67□□□□□ -1.5
CTSA-210ENST00000606000 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
CTSA-210ENST00000606000 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
CTSA-210ENST00000606000 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
CTSA-210ENST00000606000 KLKP1Q107X0 134 aa5.65□□□□□ -1.5
CTSA-210ENST00000606000 LINC00208Q96KT6 92 aa5.64□□□□□ -1.51
CTSA-210ENST00000606000 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
CTSA-210ENST00000606000 MP68P56378 58 aa5.61□□□□□ -1.51
CTSA-210ENST00000606000 H7BZZ5 65 aa5.6□□□□□ -1.51
CTSA-210ENST00000606000 CSAG1Q6PB30 78 aa5.59□□□□□ -1.51
CTSA-210ENST00000606000 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
CTSA-210ENST00000606000 NDUFC1O43677 76 aa5.56□□□□□ -1.52
CTSA-210ENST00000606000 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
CTSA-210ENST00000606000 MT1BP07438 61 aa5.54□□□□□ -1.52
CTSA-210ENST00000606000 H3BPC8 53 aa5.52□□□□□ -1.53
CTSA-210ENST00000606000 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
CTSA-210ENST00000606000 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
CTSA-210ENST00000606000 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
CTSA-210ENST00000606000 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
CTSA-210ENST00000606000 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
CTSA-210ENST00000606000 Q5VV11 94 aa5.48□□□□□ -1.53
CTSA-210ENST00000606000 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
CTSA-210ENST00000606000 A6NN06 94 aa5.43□□□□□ -1.54
CTSA-210ENST00000606000 A8MUN3 132 aa5.42□□□□□ -1.54
CTSA-210ENST00000606000 DMAC1Q96GE9 116 aa5.39□□□□□ -1.55
CTSA-210ENST00000606000 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
CTSA-210ENST00000606000 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
CTSA-210ENST00000606000 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
CTSA-210ENST00000606000 H0YAA0 97 aa5.36□□□□□ -1.55
CTSA-210ENST00000606000 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
CTSA-210ENST00000606000 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
CTSA-210ENST00000606000 SPANXA2-OT1Q8N9U9 137 aa5.33□□□□□ -1.56
CTSA-210ENST00000606000 ACYP2P14621 99 aa5.29□□□□□ -1.56
CTSA-210ENST00000606000 P0C880 135 aa5.26□□□□□ -1.57
CTSA-210ENST00000606000 Q1T7F1 81 aa5.25□□□□□ -1.57
CTSA-210ENST00000606000 CHKB-CPT1BH3BT56 60 aa5.24□□□□□ -1.57
CTSA-210ENST00000606000 MT1XP80297 61 aa5.19□□□□□ -1.58
CTSA-210ENST00000606000 M0QZ58 72 aa5.18□□□□□ -1.58
CTSA-210ENST00000606000 COA5Q86WW8 74 aa5.18□□□□□ -1.58
CTSA-210ENST00000606000 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
CTSA-210ENST00000606000 R4GN34 69 aa5.18□□□□□ -1.58
CTSA-210ENST00000606000 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
CTSA-210ENST00000606000 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
CTSA-210ENST00000606000 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
CTSA-210ENST00000606000 V9GYY9 64 aa5.16□□□□□ -1.58
CTSA-210ENST00000606000 NEBP20929 6669 aa5.15□□□□□ -1.58
CTSA-210ENST00000606000 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
CTSA-210ENST00000606000 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
CTSA-210ENST00000606000 LINC01554Q52M75 96 aa5.11□□□□□ -1.59
CTSA-210ENST00000606000 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
CTSA-210ENST00000606000 KMT2DO14686 5537 aa5.08□□□□□ -1.6
CTSA-210ENST00000606000 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
CTSA-210ENST00000606000 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
CTSA-210ENST00000606000 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
CTSA-210ENST00000606000 KRTAP12-2P59991 146 aa5□□□□□ -1.61
CTSA-210ENST00000606000 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
CTSA-210ENST00000606000 PSPHP1O15172 72 aa4.99□□□□□ -1.61
CTSA-210ENST00000606000 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
CTSA-210ENST00000606000 MDN1Q9NU22 5596 aa4.98□□□□□ -1.61
CTSA-210ENST00000606000 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
CTSA-210ENST00000606000 SPRR2EP22531 72 aa4.96□□□□□ -1.62
CTSA-210ENST00000606000 SPRR2BP35325 72 aa4.96□□□□□ -1.62
CTSA-210ENST00000606000 SPRR2AP35326 72 aa4.96□□□□□ -1.62
CTSA-210ENST00000606000 SEC61GP60059 68 aa4.95□□□□□ -1.62
CTSA-210ENST00000606000 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
CTSA-210ENST00000606000 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
CTSA-210ENST00000606000 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
CTSA-210ENST00000606000 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
CTSA-210ENST00000606000 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
CTSA-210ENST00000606000 A0A1B0GU69 56 aa4.88□□□□□ -1.63
CTSA-210ENST00000606000 A8MU10 97 aa4.88□□□□□ -1.63
CTSA-210ENST00000606000 A0A1B0GU33 70 aa4.85□□□□□ -1.63
CTSA-210ENST00000606000 SPATA8Q6RVD6 105 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms