RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 RBM12B-AS1Q9P1G2 102 aa9.67□□□□□ -0.86
TUBB4B-202ENST00000604929 PRR15LQ9BU68 103 aa9.66□□□□□ -0.86
TUBB4B-202ENST00000604929 LINC01558Q9Y6Z2 57 aa9.66□□□□□ -0.86
TUBB4B-202ENST00000604929 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
TUBB4B-202ENST00000604929 LCA10Q71F78 164 aa9.6□□□□□ -0.87
TUBB4B-202ENST00000604929 SPTSSBQ8NFR3 76 aa9.6□□□□□ -0.87
TUBB4B-202ENST00000604929 Q5VV11 94 aa9.58□□□□□ -0.88
TUBB4B-202ENST00000604929 S4R3F8 94 aa9.57□□□□□ -0.88
TUBB4B-202ENST00000604929 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
TUBB4B-202ENST00000604929 A0A1B0GU69 56 aa9.54□□□□□ -0.88
TUBB4B-202ENST00000604929 UBR4Q5T4S7 5183 aa9.47□□□□□ -0.89
TUBB4B-202ENST00000604929 SEC61GP60059 68 aa9.43□□□□□ -0.9
TUBB4B-202ENST00000604929 KRTAP19-2Q3LHN2 52 aa9.41□□□□□ -0.9
TUBB4B-202ENST00000604929 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
TUBB4B-202ENST00000604929 A6NED7 52 aa9.39□□□□□ -0.91
TUBB4B-202ENST00000604929 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
TUBB4B-202ENST00000604929 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
TUBB4B-202ENST00000604929 A8MU10 97 aa9.31□□□□□ -0.92
TUBB4B-202ENST00000604929 FAT4Q6V0I7 4981 aa9.26□□□□□ -0.93
TUBB4B-202ENST00000604929 UQCR11O14957 56 aa9.24□□□□□ -0.93
TUBB4B-202ENST00000604929 KRTAP10-6P60371 365 aaPredicted RBP9.23□□□□□ -0.93
TUBB4B-202ENST00000604929 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
TUBB4B-202ENST00000604929 A0A1B0GU33 70 aa9.22□□□□□ -0.93
TUBB4B-202ENST00000604929 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.93
TUBB4B-202ENST00000604929 FLGP20930 4061 aaPredicted RBP9.21□□□□□ -0.94
TUBB4B-202ENST00000604929 P0C880 135 aa9.19□□□□□ -0.94
TUBB4B-202ENST00000604929 CDC42SE1Q9NRR8 79 aa9.18□□□□□ -0.94
TUBB4B-202ENST00000604929 MIR22HGQ0VDD5 57 aa9.17□□□□□ -0.94
TUBB4B-202ENST00000604929 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
TUBB4B-202ENST00000604929 PRO0628Q9UI54 55 aa9.15□□□□□ -0.94
TUBB4B-202ENST00000604929 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
TUBB4B-202ENST00000604929 H0YAA0 97 aa9.1□□□□□ -0.95
TUBB4B-202ENST00000604929 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
TUBB4B-202ENST00000604929 M0R2T5 61 aa8.98□□□□□ -0.97
TUBB4B-202ENST00000604929 MT1HP80294 61 aa8.98□□□□□ -0.97
TUBB4B-202ENST00000604929 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
TUBB4B-202ENST00000604929 A0A0D9SG42 100 aa8.93□□□□□ -0.98
TUBB4B-202ENST00000604929 PMAIP1Q13794 54 aa8.88□□□□□ -0.99
TUBB4B-202ENST00000604929 R4GN34 69 aa8.87□□□□□ -0.99
TUBB4B-202ENST00000604929 M0QZ58 72 aa8.86□□□□□ -0.99
TUBB4B-202ENST00000604929 LINC01554Q52M75 96 aa8.8□□□□□ -1
TUBB4B-202ENST00000604929 A6NN06 94 aa8.75□□□□□ -1.01
TUBB4B-202ENST00000604929 SPINT4Q6UDR6 99 aa8.7□□□□□ -1.02
TUBB4B-202ENST00000604929 K7ERS5 55 aa8.69□□□□□ -1.02
TUBB4B-202ENST00000604929 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
TUBB4B-202ENST00000604929 KRTAP9-8Q9BYQ0 159 aa8.67□□□□□ -1.02
TUBB4B-202ENST00000604929 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
TUBB4B-202ENST00000604929 MT2AP02795 61 aa8.64□□□□□ -1.03
TUBB4B-202ENST00000604929 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
TUBB4B-202ENST00000604929 MT1FP04733 61 aa8.62□□□□□ -1.03
TUBB4B-202ENST00000604929 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
TUBB4B-202ENST00000604929 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
TUBB4B-202ENST00000604929 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
TUBB4B-202ENST00000604929 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
TUBB4B-202ENST00000604929 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.06
TUBB4B-202ENST00000604929 ROMO1P60602 79 aa8.37□□□□□ -1.07
TUBB4B-202ENST00000604929 PRAC1Q96KF2 57 aa8.36□□□□□ -1.07
TUBB4B-202ENST00000604929 KRTAP9-3Q9BYQ3 159 aa8.34□□□□□ -1.07
TUBB4B-202ENST00000604929 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
TUBB4B-202ENST00000604929 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
TUBB4B-202ENST00000604929 KRTAP19-8Q3LI54 63 aa8.21□□□□□ -1.1
TUBB4B-202ENST00000604929 C10orf95Q9H7T3 257 aa8.21□□□□□ -1.1
TUBB4B-202ENST00000604929 MT1BP07438 61 aa8.15□□□□□ -1.1
TUBB4B-202ENST00000604929 LCE2BO14633 110 aa8.12□□□□□ -1.11
TUBB4B-202ENST00000604929 USH2AO75445 5202 aa8.07□□□□□ -1.12
TUBB4B-202ENST00000604929 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
TUBB4B-202ENST00000604929 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
TUBB4B-202ENST00000604929 MT1XP80297 61 aa7.92□□□□□ -1.14
TUBB4B-202ENST00000604929 TNP1P09430 55 aa7.89□□□□□ -1.15
TUBB4B-202ENST00000604929 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
TUBB4B-202ENST00000604929 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
TUBB4B-202ENST00000604929 SSPOA2VEC9 5147 aa7.71□□□□□ -1.18
TUBB4B-202ENST00000604929 H3BS24 57 aa7.69□□□□□ -1.18
TUBB4B-202ENST00000604929 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
TUBB4B-202ENST00000604929 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
TUBB4B-202ENST00000604929 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
TUBB4B-202ENST00000604929 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
TUBB4B-202ENST00000604929 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
TUBB4B-202ENST00000604929 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
TUBB4B-202ENST00000604929 KMT2DO14686 5537 aa7.53□□□□□ -1.2
TUBB4B-202ENST00000604929 KRTAP19-6Q3LI70 58 aa7.51□□□□□ -1.21
TUBB4B-202ENST00000604929 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
TUBB4B-202ENST00000604929 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
TUBB4B-202ENST00000604929 KRTAP9-2Q9BYQ4 174 aa7.38□□□□□ -1.23
TUBB4B-202ENST00000604929 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
TUBB4B-202ENST00000604929 FCGBPQ9Y6R7 5405 aaPredicted RBP7.34□□□□□ -1.24
TUBB4B-202ENST00000604929 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
TUBB4B-202ENST00000604929 KRTAP19-5Q3LI72 72 aa7.22□□□□□ -1.25
TUBB4B-202ENST00000604929 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
TUBB4B-202ENST00000604929 CRCT1Q9UGL9 99 aa7.12□□□□□ -1.27
TUBB4B-202ENST00000604929 KRTAP19-7Q3SYF9 63 aa7.07□□□□□ -1.28
TUBB4B-202ENST00000604929 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
TUBB4B-202ENST00000604929 MT1EP04732 61 aa6.92□□□□□ -1.3
TUBB4B-202ENST00000604929 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
TUBB4B-202ENST00000604929 MUC12Q9UKN1 5478 aa6.86□□□□□ -1.31
TUBB4B-202ENST00000604929 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
TUBB4B-202ENST00000604929 MT1LQ93083 61 aa6.8□□□□□ -1.32
TUBB4B-202ENST00000604929 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
TUBB4B-202ENST00000604929 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
TUBB4B-202ENST00000604929 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms