RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 A8MUU9 505 aa5.88□□□□□ -1.47
LINC01235-201ENST00000604724 COA5Q86WW8 74 aa5.88□□□□□ -1.47
LINC01235-201ENST00000604724 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
LINC01235-201ENST00000604724 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
LINC01235-201ENST00000604724 ADM2Q7Z4H4 148 aa5.8□□□□□ -1.48
LINC01235-201ENST00000604724 ABCA13Q86UQ4 5058 aa5.79□□□□□ -1.48
LINC01235-201ENST00000604724 ACYP2P14621 99 aa5.78□□□□□ -1.48
LINC01235-201ENST00000604724 XP32Q5T750 250 aa5.76□□□□□ -1.49
LINC01235-201ENST00000604724 SPINK7P58062 85 aa5.75□□□□□ -1.49
LINC01235-201ENST00000604724 LPAP08519 4548 aa5.73□□□□□ -1.49
LINC01235-201ENST00000604724 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
LINC01235-201ENST00000604724 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
LINC01235-201ENST00000604724 HERC2O95714 4834 aa5.72□□□□□ -1.49
LINC01235-201ENST00000604724 LRP2P98164 4655 aa5.71□□□□□ -1.49
LINC01235-201ENST00000604724 BIRC6Q9NR09 4857 aa5.7□□□□□ -1.5
LINC01235-201ENST00000604724 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
LINC01235-201ENST00000604724 ROMO1P60602 79 aa5.68□□□□□ -1.5
LINC01235-201ENST00000604724 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
LINC01235-201ENST00000604724 CSAG1Q6PB30 78 aa5.66□□□□□ -1.5
LINC01235-201ENST00000604724 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
LINC01235-201ENST00000604724 TPRXLQ17RH7 258 aa5.65□□□□□ -1.51
LINC01235-201ENST00000604724 LCE2CQ5TA81 110 aa5.64□□□□□ -1.51
LINC01235-201ENST00000604724 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
LINC01235-201ENST00000604724 KRTAP9-6A0A140TA67 174 aa5.6□□□□□ -1.51
LINC01235-201ENST00000604724 COX6B2Q6YFQ2 88 aa5.6□□□□□ -1.51
LINC01235-201ENST00000604724 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
LINC01235-201ENST00000604724 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
LINC01235-201ENST00000604724 A0A1B0GU69 56 aa5.54□□□□□ -1.52
LINC01235-201ENST00000604724 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
LINC01235-201ENST00000604724 P0C880 135 aa5.52□□□□□ -1.53
LINC01235-201ENST00000604724 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
LINC01235-201ENST00000604724 HERC1Q15751 4861 aa5.5□□□□□ -1.53
LINC01235-201ENST00000604724 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
LINC01235-201ENST00000604724 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
LINC01235-201ENST00000604724 S4R3F8 94 aa5.42□□□□□ -1.54
LINC01235-201ENST00000604724 SPATA8Q6RVD6 105 aa5.42□□□□□ -1.54
LINC01235-201ENST00000604724 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
LINC01235-201ENST00000604724 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
LINC01235-201ENST00000604724 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
LINC01235-201ENST00000604724 MUC2Q02817 5179 aa5.41□□□□□ -1.54
LINC01235-201ENST00000604724 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
LINC01235-201ENST00000604724 LUZP6Q538Z0 58 aa5.4□□□□□ -1.55
LINC01235-201ENST00000604724 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
LINC01235-201ENST00000604724 UQCR11O14957 56 aa5.39□□□□□ -1.55
LINC01235-201ENST00000604724 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
LINC01235-201ENST00000604724 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
LINC01235-201ENST00000604724 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
LINC01235-201ENST00000604724 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
LINC01235-201ENST00000604724 A0A1B0GU33 70 aa5.32□□□□□ -1.56
LINC01235-201ENST00000604724 H0YAA0 97 aa5.32□□□□□ -1.56
LINC01235-201ENST00000604724 K7ERS5 55 aa5.32□□□□□ -1.56
LINC01235-201ENST00000604724 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
LINC01235-201ENST00000604724 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
LINC01235-201ENST00000604724 KRTAP19-2Q3LHN2 52 aa5.28□□□□□ -1.56
LINC01235-201ENST00000604724 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
LINC01235-201ENST00000604724 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
LINC01235-201ENST00000604724 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
LINC01235-201ENST00000604724 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
LINC01235-201ENST00000604724 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
LINC01235-201ENST00000604724 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
LINC01235-201ENST00000604724 RNF213Q63HN8 5207 aa5.15□□□□□ -1.59
LINC01235-201ENST00000604724 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
LINC01235-201ENST00000604724 A0A0D9SG42 100 aa5.13□□□□□ -1.59
LINC01235-201ENST00000604724 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
LINC01235-201ENST00000604724 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
LINC01235-201ENST00000604724 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
LINC01235-201ENST00000604724 M0QZ58 72 aa5.05□□□□□ -1.6
LINC01235-201ENST00000604724 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
LINC01235-201ENST00000604724 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
LINC01235-201ENST00000604724 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
LINC01235-201ENST00000604724 R4GN34 69 aa5.02□□□□□ -1.61
LINC01235-201ENST00000604724 KRTAP12-1P59990 96 aa5□□□□□ -1.61
LINC01235-201ENST00000604724 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
LINC01235-201ENST00000604724 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
LINC01235-201ENST00000604724 MT1HP80294 61 aa4.95□□□□□ -1.62
LINC01235-201ENST00000604724 M0R2T5 61 aa4.9□□□□□ -1.62
LINC01235-201ENST00000604724 MT2AP02795 61 aa4.8□□□□□ -1.64
LINC01235-201ENST00000604724 MT1FP04733 61 aa4.79□□□□□ -1.64
LINC01235-201ENST00000604724 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
LINC01235-201ENST00000604724 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
LINC01235-201ENST00000604724 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
LINC01235-201ENST00000604724 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
LINC01235-201ENST00000604724 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
LINC01235-201ENST00000604724 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
LINC01235-201ENST00000604724 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
LINC01235-201ENST00000604724 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
LINC01235-201ENST00000604724 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.67
LINC01235-201ENST00000604724 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
LINC01235-201ENST00000604724 MT1BP07438 61 aa4.56□□□□□ -1.68
LINC01235-201ENST00000604724 TNP1P09430 55 aa4.49□□□□□ -1.69
LINC01235-201ENST00000604724 USH2AO75445 5202 aa4.48□□□□□ -1.69
LINC01235-201ENST00000604724 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
LINC01235-201ENST00000604724 MT1XP80297 61 aa4.46□□□□□ -1.7
LINC01235-201ENST00000604724 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
LINC01235-201ENST00000604724 LCE3AQ5TA76 89 aa4.34□□□□□ -1.72
LINC01235-201ENST00000604724 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
LINC01235-201ENST00000604724 INE1O15225 51 aa4.31□□□□□ -1.72
LINC01235-201ENST00000604724 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
LINC01235-201ENST00000604724 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
LINC01235-201ENST00000604724 KMT2DO14686 5537 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms