RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
HCG18-248ENST00000602861 LCA10Q71F78 164 aa4.63□□□□□ -1.67
HCG18-248ENST00000602861 NDUFS5O43920 106 aa4.62□□□□□ -1.67
HCG18-248ENST00000602861 Q5W150 140 aa4.61□□□□□ -1.67
HCG18-248ENST00000602861 IGLV7-43P04211 117 aa4.6□□□□□ -1.67
HCG18-248ENST00000602861 CIRBP-AS1Q8TBR5 109 aa4.6□□□□□ -1.67
HCG18-248ENST00000602861 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
HCG18-248ENST00000602861 DNAH8Q96JB1 4490 aa4.59□□□□□ -1.68
HCG18-248ENST00000602861 A6NED7 52 aa4.58□□□□□ -1.68
HCG18-248ENST00000602861 SPAG11AQ6PDA7 123 aa4.58□□□□□ -1.68
HCG18-248ENST00000602861 ATP11AUNQ6ZP68 121 aa4.58□□□□□ -1.68
HCG18-248ENST00000602861 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
HCG18-248ENST00000602861 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
HCG18-248ENST00000602861 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
HCG18-248ENST00000602861 SSBP3-AS1Q7Z2R9 100 aa4.57□□□□□ -1.68
HCG18-248ENST00000602861 HMCN2Q8NDA2 5059 aa4.56□□□□□ -1.68
HCG18-248ENST00000602861 A6NN06 94 aa4.56□□□□□ -1.68
HCG18-248ENST00000602861 SEC61GP60059 68 aa4.56□□□□□ -1.68
HCG18-248ENST00000602861 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
HCG18-248ENST00000602861 SPINK7P58062 85 aa4.55□□□□□ -1.68
HCG18-248ENST00000602861 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
HCG18-248ENST00000602861 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
HCG18-248ENST00000602861 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
HCG18-248ENST00000602861 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
HCG18-248ENST00000602861 SPTSSBQ8NFR3 76 aa4.52□□□□□ -1.69
HCG18-248ENST00000602861 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
HCG18-248ENST00000602861 ACYP2P14621 99 aa4.51□□□□□ -1.69
HCG18-248ENST00000602861 FAT3Q8TDW7 4589 aa4.51□□□□□ -1.69
HCG18-248ENST00000602861 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
HCG18-248ENST00000602861 LINC00313P59037 77 aa4.5□□□□□ -1.69
HCG18-248ENST00000602861 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
HCG18-248ENST00000602861 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
HCG18-248ENST00000602861 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
HCG18-248ENST00000602861 C7orf65Q6ZTY9 151 aa4.45□□□□□ -1.7
HCG18-248ENST00000602861 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
HCG18-248ENST00000602861 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
HCG18-248ENST00000602861 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
HCG18-248ENST00000602861 LRP2P98164 4655 aa4.4□□□□□ -1.71
HCG18-248ENST00000602861 A0A1B0GU69 56 aa4.39□□□□□ -1.71
HCG18-248ENST00000602861 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
HCG18-248ENST00000602861 TNXBP22105 4242 aa4.36□□□□□ -1.71
HCG18-248ENST00000602861 KRTAP10-8P60410 259 aa4.35□□□□□ -1.71
HCG18-248ENST00000602861 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
HCG18-248ENST00000602861 SPINK1P00995 79 aa4.34□□□□□ -1.71
HCG18-248ENST00000602861 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
HCG18-248ENST00000602861 TYMSOSQ8TAI1 123 aa4.34□□□□□ -1.71
HCG18-248ENST00000602861 UQCR11O14957 56 aa4.33□□□□□ -1.72
HCG18-248ENST00000602861 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
HCG18-248ENST00000602861 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
HCG18-248ENST00000602861 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
HCG18-248ENST00000602861 A8MUU9 505 aa4.28□□□□□ -1.72
HCG18-248ENST00000602861 MT3P25713 68 aa4.27□□□□□ -1.73
HCG18-248ENST00000602861 C20orf166-AS1Q96NR2 134 aa4.26□□□□□ -1.73
HCG18-248ENST00000602861 LPAP08519 4548 aa4.23□□□□□ -1.73
HCG18-248ENST00000602861 C9orf92A6NGG3 77 aa4.21□□□□□ -1.74
HCG18-248ENST00000602861 H0YAA0 97 aa4.21□□□□□ -1.74
HCG18-248ENST00000602861 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
HCG18-248ENST00000602861 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
HCG18-248ENST00000602861 H1FX-AS1Q4G0G2 97 aa4.17□□□□□ -1.74
HCG18-248ENST00000602861 A0A1B0GU33 70 aa4.15□□□□□ -1.75
HCG18-248ENST00000602861 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
HCG18-248ENST00000602861 MUC2Q02817 5179 aa4.15□□□□□ -1.75
HCG18-248ENST00000602861 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
HCG18-248ENST00000602861 TPRXLQ17RH7 258 aa4.07□□□□□ -1.76
HCG18-248ENST00000602861 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
HCG18-248ENST00000602861 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
HCG18-248ENST00000602861 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
HCG18-248ENST00000602861 RPL37P61927 97 aaKnown RBP4.03□□□□□ -1.76
HCG18-248ENST00000602861 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
HCG18-248ENST00000602861 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
HCG18-248ENST00000602861 K7ERS5 55 aa3.99□□□□□ -1.77
HCG18-248ENST00000602861 ROMO1P60602 79 aa3.98□□□□□ -1.77
HCG18-248ENST00000602861 S4R3F8 94 aa3.97□□□□□ -1.77
HCG18-248ENST00000602861 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
HCG18-248ENST00000602861 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
HCG18-248ENST00000602861 P0C880 135 aa3.93□□□□□ -1.78
HCG18-248ENST00000602861 A0A0D9SG42 100 aa3.92□□□□□ -1.78
HCG18-248ENST00000602861 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
HCG18-248ENST00000602861 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
HCG18-248ENST00000602861 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
HCG18-248ENST00000602861 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
HCG18-248ENST00000602861 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
HCG18-248ENST00000602861 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
HCG18-248ENST00000602861 MT1HP80294 61 aa3.84□□□□□ -1.79
HCG18-248ENST00000602861 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
HCG18-248ENST00000602861 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
HCG18-248ENST00000602861 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
HCG18-248ENST00000602861 M0QZ58 72 aa3.8□□□□□ -1.8
HCG18-248ENST00000602861 M0R2T5 61 aa3.8□□□□□ -1.8
HCG18-248ENST00000602861 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
HCG18-248ENST00000602861 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
HCG18-248ENST00000602861 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
HCG18-248ENST00000602861 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
HCG18-248ENST00000602861 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
HCG18-248ENST00000602861 R4GN34 69 aa3.64□□□□□ -1.83
HCG18-248ENST00000602861 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
HCG18-248ENST00000602861 USH2AO75445 5202 aa3.56□□□□□ -1.84
HCG18-248ENST00000602861 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
HCG18-248ENST00000602861 MT2AP02795 61 aa3.55□□□□□ -1.84
HCG18-248ENST00000602861 MT1FP04733 61 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms