RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 KRTAP9-2Q9BYQ4 174 aa9.25□□□□□ -0.93
UBE2E3-209ENST00000602710 M0R2T5 61 aa9.24□□□□□ -0.93
UBE2E3-209ENST00000602710 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
UBE2E3-209ENST00000602710 TMEM258P61165 79 aa9.23□□□□□ -0.93
UBE2E3-209ENST00000602710 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
UBE2E3-209ENST00000602710 COA5Q86WW8 74 aa9.16□□□□□ -0.94
UBE2E3-209ENST00000602710 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
UBE2E3-209ENST00000602710 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
UBE2E3-209ENST00000602710 KRTAP9-6A0A140TA67 174 aa9.12□□□□□ -0.95
UBE2E3-209ENST00000602710 KRTAP10-6P60371 365 aaPredicted RBP9.08□□□□□ -0.96
UBE2E3-209ENST00000602710 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
UBE2E3-209ENST00000602710 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
UBE2E3-209ENST00000602710 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
UBE2E3-209ENST00000602710 SERP1Q9Y6X1 66 aa8.95□□□□□ -0.98
UBE2E3-209ENST00000602710 MT2AP02795 61 aa8.92□□□□□ -0.98
UBE2E3-209ENST00000602710 MT1FP04733 61 aa8.87□□□□□ -0.99
UBE2E3-209ENST00000602710 H0YAA0 97 aa8.86□□□□□ -0.99
UBE2E3-209ENST00000602710 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
UBE2E3-209ENST00000602710 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
UBE2E3-209ENST00000602710 KRTAP3-2Q9BYR7 98 aa8.82□□□□□ -1
UBE2E3-209ENST00000602710 P0C880 135 aa8.78□□□□□ -1
UBE2E3-209ENST00000602710 RPS28P62857 69 aaKnown RBP8.76□□□□□ -1.01
UBE2E3-209ENST00000602710 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
UBE2E3-209ENST00000602710 SEC61GP60059 68 aa8.69□□□□□ -1.02
UBE2E3-209ENST00000602710 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
UBE2E3-209ENST00000602710 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
UBE2E3-209ENST00000602710 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
UBE2E3-209ENST00000602710 A0A1B0GU69 56 aa8.66□□□□□ -1.02
UBE2E3-209ENST00000602710 CRCT1Q9UGL9 99 aa8.66□□□□□ -1.02
UBE2E3-209ENST00000602710 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
UBE2E3-209ENST00000602710 FSIP2Q5CZC0 6907 aa8.59□□□□□ -1.03
UBE2E3-209ENST00000602710 Q1T7F1 81 aa8.58□□□□□ -1.04
UBE2E3-209ENST00000602710 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
UBE2E3-209ENST00000602710 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
UBE2E3-209ENST00000602710 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
UBE2E3-209ENST00000602710 R4GN34 69 aa8.55□□□□□ -1.04
UBE2E3-209ENST00000602710 V9GYY9 64 aa8.55□□□□□ -1.04
UBE2E3-209ENST00000602710 M0QZ58 72 aa8.53□□□□□ -1.04
UBE2E3-209ENST00000602710 A0A1B0GU33 70 aa8.52□□□□□ -1.05
UBE2E3-209ENST00000602710 LCE2BO14633 110 aa8.51□□□□□ -1.05
UBE2E3-209ENST00000602710 PSPHP1O15172 72 aa8.49□□□□□ -1.05
UBE2E3-209ENST00000602710 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
UBE2E3-209ENST00000602710 SPATA8Q6RVD6 105 aa8.43□□□□□ -1.06
UBE2E3-209ENST00000602710 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
UBE2E3-209ENST00000602710 Q5VV11 94 aa8.4□□□□□ -1.06
UBE2E3-209ENST00000602710 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
UBE2E3-209ENST00000602710 UQCR11O14957 56 aa8.32□□□□□ -1.08
UBE2E3-209ENST00000602710 MT1BP07438 61 aa8.32□□□□□ -1.08
UBE2E3-209ENST00000602710 A0A0D9SG42 100 aa8.3□□□□□ -1.08
UBE2E3-209ENST00000602710 A8MU10 97 aa8.27□□□□□ -1.09
UBE2E3-209ENST00000602710 USH2AO75445 5202 aa8.26□□□□□ -1.09
UBE2E3-209ENST00000602710 A6NED7 52 aa8.21□□□□□ -1.1
UBE2E3-209ENST00000602710 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
UBE2E3-209ENST00000602710 A6NN06 94 aa8.18□□□□□ -1.1
UBE2E3-209ENST00000602710 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
UBE2E3-209ENST00000602710 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
UBE2E3-209ENST00000602710 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
UBE2E3-209ENST00000602710 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
UBE2E3-209ENST00000602710 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
UBE2E3-209ENST00000602710 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.09□□□□□ -1.11
UBE2E3-209ENST00000602710 SSPOA2VEC9 5147 aa8.05□□□□□ -1.12
UBE2E3-209ENST00000602710 KRTAP19-6Q3LI70 58 aa8.04□□□□□ -1.12
UBE2E3-209ENST00000602710 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
UBE2E3-209ENST00000602710 MT1XP80297 61 aa7.97□□□□□ -1.13
UBE2E3-209ENST00000602710 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
UBE2E3-209ENST00000602710 KRTAP10-5P60370 271 aa7.96□□□□□ -1.14
UBE2E3-209ENST00000602710 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
UBE2E3-209ENST00000602710 K7ERS5 55 aa7.86□□□□□ -1.15
UBE2E3-209ENST00000602710 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
UBE2E3-209ENST00000602710 FCGBPQ9Y6R7 5405 aaPredicted RBP7.8□□□□□ -1.16
UBE2E3-209ENST00000602710 C10orf95Q9H7T3 257 aa7.72□□□□□ -1.17
UBE2E3-209ENST00000602710 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
UBE2E3-209ENST00000602710 MACF1Q9UPN3 7388 aaKnown RBP7.6□□□□□ -1.19
UBE2E3-209ENST00000602710 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
UBE2E3-209ENST00000602710 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
UBE2E3-209ENST00000602710 TNP1P09430 55 aa7.51□□□□□ -1.21
UBE2E3-209ENST00000602710 ROMO1P60602 79 aa7.51□□□□□ -1.21
UBE2E3-209ENST00000602710 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
UBE2E3-209ENST00000602710 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
UBE2E3-209ENST00000602710 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
UBE2E3-209ENST00000602710 KRTAP6-3Q3LI67 103 aa7.42□□□□□ -1.22
UBE2E3-209ENST00000602710 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
UBE2E3-209ENST00000602710 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
UBE2E3-209ENST00000602710 KMT2DO14686 5537 aa7.39□□□□□ -1.23
UBE2E3-209ENST00000602710 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
UBE2E3-209ENST00000602710 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
UBE2E3-209ENST00000602710 NEBP20929 6669 aa7.21□□□□□ -1.26
UBE2E3-209ENST00000602710 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
UBE2E3-209ENST00000602710 KRTAP5-9P26371 169 aa7.13□□□□□ -1.27
UBE2E3-209ENST00000602710 KRTAP19-5Q3LI72 72 aa7.12□□□□□ -1.27
UBE2E3-209ENST00000602710 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
UBE2E3-209ENST00000602710 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
UBE2E3-209ENST00000602710 KRTAP20-1Q3LI63 56 aa7.08□□□□□ -1.28
UBE2E3-209ENST00000602710 MUC12Q9UKN1 5478 aa7.05□□□□□ -1.28
UBE2E3-209ENST00000602710 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
UBE2E3-209ENST00000602710 PRAC1Q96KF2 57 aa7.03□□□□□ -1.28
UBE2E3-209ENST00000602710 MT1EP04732 61 aa7□□□□□ -1.29
UBE2E3-209ENST00000602710 KRTAP12-3P60328 96 aa7□□□□□ -1.29
UBE2E3-209ENST00000602710 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
UBE2E3-209ENST00000602710 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms