RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 COX7CP15954 63 aa7.15□□□□□ -1.26
SMG9-208ENST00000598886 C4orf26Q17RF5 130 aa7.14□□□□□ -1.27
SMG9-208ENST00000598886 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
SMG9-208ENST00000598886 UQCRQO14949 82 aa7.13□□□□□ -1.27
SMG9-208ENST00000598886 TP53AIP1Q9HCN2 124 aa7.11□□□□□ -1.27
SMG9-208ENST00000598886 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
SMG9-208ENST00000598886 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
SMG9-208ENST00000598886 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
SMG9-208ENST00000598886 CCDC179H3BU77 68 aa7.06□□□□□ -1.28
SMG9-208ENST00000598886 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
SMG9-208ENST00000598886 TRAV22A0A0B4J277 110 aa7.03□□□□□ -1.28
SMG9-208ENST00000598886 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
SMG9-208ENST00000598886 A6NN06 94 aa7.02□□□□□ -1.29
SMG9-208ENST00000598886 H3BPC8 53 aa7.02□□□□□ -1.29
SMG9-208ENST00000598886 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
SMG9-208ENST00000598886 H0Y9P7 68 aa7.01□□□□□ -1.29
SMG9-208ENST00000598886 MP68P56378 58 aa7.01□□□□□ -1.29
SMG9-208ENST00000598886 Q5VV11 94 aa7.01□□□□□ -1.29
SMG9-208ENST00000598886 KRTAP10-5P60370 271 aa7□□□□□ -1.29
SMG9-208ENST00000598886 LCA10Q71F78 164 aa7□□□□□ -1.29
SMG9-208ENST00000598886 S4R3F8 94 aa7□□□□□ -1.29
SMG9-208ENST00000598886 C1orf64Q8NEQ6 169 aa6.96□□□□□ -1.3
SMG9-208ENST00000598886 NDUFC1O43677 76 aa6.95□□□□□ -1.3
SMG9-208ENST00000598886 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
SMG9-208ENST00000598886 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
SMG9-208ENST00000598886 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
SMG9-208ENST00000598886 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
SMG9-208ENST00000598886 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
SMG9-208ENST00000598886 KRTAP5-9P26371 169 aa6.93□□□□□ -1.3
SMG9-208ENST00000598886 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
SMG9-208ENST00000598886 H7BZZ5 65 aa6.9□□□□□ -1.3
SMG9-208ENST00000598886 KMT2DO14686 5537 aa6.9□□□□□ -1.3
SMG9-208ENST00000598886 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
SMG9-208ENST00000598886 TMEM258P61165 79 aa6.87□□□□□ -1.31
SMG9-208ENST00000598886 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.31
SMG9-208ENST00000598886 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
SMG9-208ENST00000598886 KRTAP20-1Q3LI63 56 aa6.82□□□□□ -1.32
SMG9-208ENST00000598886 SPANXA2-OT1Q8N9U9 137 aa6.81□□□□□ -1.32
SMG9-208ENST00000598886 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
SMG9-208ENST00000598886 H0YAA0 97 aa6.7□□□□□ -1.34
SMG9-208ENST00000598886 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
SMG9-208ENST00000598886 SERP1Q9Y6X1 66 aa6.64□□□□□ -1.35
SMG9-208ENST00000598886 MT1XP80297 61 aa6.63□□□□□ -1.35
SMG9-208ENST00000598886 A8MUN3 132 aa6.62□□□□□ -1.35
SMG9-208ENST00000598886 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
SMG9-208ENST00000598886 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.35
SMG9-208ENST00000598886 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.35
SMG9-208ENST00000598886 ACYP2P14621 99 aa6.58□□□□□ -1.36
SMG9-208ENST00000598886 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
SMG9-208ENST00000598886 COA5Q86WW8 74 aa6.56□□□□□ -1.36
SMG9-208ENST00000598886 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
SMG9-208ENST00000598886 SPRR2EP22531 72 aa6.53□□□□□ -1.36
SMG9-208ENST00000598886 SPRR2BP35325 72 aa6.53□□□□□ -1.36
SMG9-208ENST00000598886 SPRR2AP35326 72 aa6.53□□□□□ -1.36
SMG9-208ENST00000598886 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
SMG9-208ENST00000598886 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
SMG9-208ENST00000598886 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
SMG9-208ENST00000598886 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
SMG9-208ENST00000598886 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.38
SMG9-208ENST00000598886 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
SMG9-208ENST00000598886 P0C880 135 aa6.44□□□□□ -1.38
SMG9-208ENST00000598886 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SMG9-208ENST00000598886 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
SMG9-208ENST00000598886 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
SMG9-208ENST00000598886 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
SMG9-208ENST00000598886 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
SMG9-208ENST00000598886 KRTAP2-2Q9BYT5 123 aa6.37□□□□□ -1.39
SMG9-208ENST00000598886 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
SMG9-208ENST00000598886 R4GN34 69 aa6.37□□□□□ -1.39
SMG9-208ENST00000598886 Q1T7F1 81 aa6.35□□□□□ -1.39
SMG9-208ENST00000598886 V9GYY9 64 aa6.35□□□□□ -1.39
SMG9-208ENST00000598886 M0QZ58 72 aa6.33□□□□□ -1.4
SMG9-208ENST00000598886 SPRR2DP22532 72 aa6.31□□□□□ -1.4
SMG9-208ENST00000598886 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
SMG9-208ENST00000598886 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
SMG9-208ENST00000598886 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
SMG9-208ENST00000598886 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
SMG9-208ENST00000598886 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
SMG9-208ENST00000598886 A0A1B0GU69 56 aa6.19□□□□□ -1.42
SMG9-208ENST00000598886 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
SMG9-208ENST00000598886 PSPHP1O15172 72 aa6.17□□□□□ -1.42
SMG9-208ENST00000598886 SEC61GP60059 68 aa6.17□□□□□ -1.42
SMG9-208ENST00000598886 A0A1B0GU33 70 aa6.01□□□□□ -1.45
SMG9-208ENST00000598886 A6NED7 52 aa6.01□□□□□ -1.45
SMG9-208ENST00000598886 UQCR11O14957 56 aa6.01□□□□□ -1.45
SMG9-208ENST00000598886 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
SMG9-208ENST00000598886 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
SMG9-208ENST00000598886 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
SMG9-208ENST00000598886 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
SMG9-208ENST00000598886 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
SMG9-208ENST00000598886 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
SMG9-208ENST00000598886 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
SMG9-208ENST00000598886 CDC42SE1Q9NRR8 79 aa5.93□□□□□ -1.46
SMG9-208ENST00000598886 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
SMG9-208ENST00000598886 MT1EP04732 61 aa5.89□□□□□ -1.47
SMG9-208ENST00000598886 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
SMG9-208ENST00000598886 A8MU10 97 aa5.82□□□□□ -1.48
SMG9-208ENST00000598886 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
SMG9-208ENST00000598886 PRO0628Q9UI54 55 aa5.8□□□□□ -1.48
SMG9-208ENST00000598886 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms