RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CSAG1Q6PB30 78 aa10.69□□□□□ -0.7
SNRNP70-204ENST00000595231 CCDC179H3BU77 68 aa10.67□□□□□ -0.7
SNRNP70-204ENST00000595231 MT1FP04733 61 aa10.65□□□□□ -0.7
SNRNP70-204ENST00000595231 PCP4P48539 62 aa10.63□□□□□ -0.71
SNRNP70-204ENST00000595231 SPANXA2-OT1Q8N9U9 137 aa10.63□□□□□ -0.71
SNRNP70-204ENST00000595231 CYSTM1Q9H1C7 97 aa10.61□□□□□ -0.71
SNRNP70-204ENST00000595231 NDUFC1O43677 76 aa10.6□□□□□ -0.71
SNRNP70-204ENST00000595231 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
SNRNP70-204ENST00000595231 KRTAP10-10P60014 251 aa10.58□□□□□ -0.72
SNRNP70-204ENST00000595231 ACYP2P14621 99 aa10.57□□□□□ -0.72
SNRNP70-204ENST00000595231 KRTAP9-2Q9BYQ4 174 aa10.56□□□□□ -0.72
SNRNP70-204ENST00000595231 H7BZZ5 65 aa10.54□□□□□ -0.72
SNRNP70-204ENST00000595231 KRTAP9-3Q9BYQ3 159 aa10.47□□□□□ -0.73
SNRNP70-204ENST00000595231 H0YAA0 97 aa10.38□□□□□ -0.75
SNRNP70-204ENST00000595231 CHKB-CPT1BH3BT56 60 aa10.35□□□□□ -0.75
SNRNP70-204ENST00000595231 LCE2BO14633 110 aa10.3□□□□□ -0.76
SNRNP70-204ENST00000595231 COA5Q86WW8 74 aa10.29□□□□□ -0.76
SNRNP70-204ENST00000595231 SPTSSBQ8NFR3 76 aa10.28□□□□□ -0.76
SNRNP70-204ENST00000595231 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
SNRNP70-204ENST00000595231 FSIP2Q5CZC0 6907 aa10.27□□□□□ -0.77
SNRNP70-204ENST00000595231 TMEM258P61165 79 aa10.25□□□□□ -0.77
SNRNP70-204ENST00000595231 USH2AO75445 5202 aa10.25□□□□□ -0.77
SNRNP70-204ENST00000595231 KRTAP19-1Q8IUB9 90 aa10.22□□□□□ -0.77
SNRNP70-204ENST00000595231 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
SNRNP70-204ENST00000595231 P0C880 135 aa10.16□□□□□ -0.78
SNRNP70-204ENST00000595231 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
SNRNP70-204ENST00000595231 SPRR2GQ9BYE4 73 aa10.16□□□□□ -0.78
SNRNP70-204ENST00000595231 CRIPTQ9P021 101 aa10.16□□□□□ -0.78
SNRNP70-204ENST00000595231 CRCT1Q9UGL9 99 aa10.06□□□□□ -0.8
SNRNP70-204ENST00000595231 SSPOA2VEC9 5147 aa10.03□□□□□ -0.8
SNRNP70-204ENST00000595231 KRTAP19-8Q3LI54 63 aa10□□□□□ -0.81
SNRNP70-204ENST00000595231 KRTAP9-6A0A140TA67 174 aa9.98□□□□□ -0.81
SNRNP70-204ENST00000595231 R4GN34 69 aa9.96□□□□□ -0.82
SNRNP70-204ENST00000595231 MT1BP07438 61 aa9.93□□□□□ -0.82
SNRNP70-204ENST00000595231 SERP1Q9Y6X1 66 aa9.93□□□□□ -0.82
SNRNP70-204ENST00000595231 M0QZ58 72 aa9.91□□□□□ -0.82
SNRNP70-204ENST00000595231 Q5VV11 94 aa9.9□□□□□ -0.82
SNRNP70-204ENST00000595231 SEC61GP60059 68 aa9.84□□□□□ -0.83
SNRNP70-204ENST00000595231 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
SNRNP70-204ENST00000595231 RPS28P62857 69 aaKnown RBP9.8□□□□□ -0.84
SNRNP70-204ENST00000595231 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
SNRNP70-204ENST00000595231 FCGBPQ9Y6R7 5405 aaPredicted RBP9.74□□□□□ -0.85
SNRNP70-204ENST00000595231 A0A1B0GU69 56 aa9.74□□□□□ -0.85
SNRNP70-204ENST00000595231 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
SNRNP70-204ENST00000595231 LINC01558Q9Y6Z2 57 aa9.68□□□□□ -0.86
SNRNP70-204ENST00000595231 A0A1B0GU33 70 aa9.67□□□□□ -0.86
SNRNP70-204ENST00000595231 SMIM26A0A096LP01 95 aa9.63□□□□□ -0.87
SNRNP70-204ENST00000595231 PLAC4Q8WY50 150 aa9.61□□□□□ -0.87
SNRNP70-204ENST00000595231 SPATA8Q6RVD6 105 aa9.58□□□□□ -0.88
SNRNP70-204ENST00000595231 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
SNRNP70-204ENST00000595231 KRTAP10-5P60370 271 aa9.56□□□□□ -0.88
SNRNP70-204ENST00000595231 A6NN06 94 aa9.55□□□□□ -0.88
SNRNP70-204ENST00000595231 Q1T7F1 81 aa9.52□□□□□ -0.89
SNRNP70-204ENST00000595231 MT1XP80297 61 aa9.46□□□□□ -0.89
SNRNP70-204ENST00000595231 V9GYY9 64 aa9.46□□□□□ -0.89
SNRNP70-204ENST00000595231 A0A0D9SG42 100 aa9.45□□□□□ -0.9
SNRNP70-204ENST00000595231 PRO2289Q9P1D8 64 aa9.38□□□□□ -0.91
SNRNP70-204ENST00000595231 PSPHP1O15172 72 aa9.36□□□□□ -0.91
SNRNP70-204ENST00000595231 A8MU10 97 aa9.35□□□□□ -0.91
SNRNP70-204ENST00000595231 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.35□□□□□ -0.91
SNRNP70-204ENST00000595231 UQCR11O14957 56 aa9.32□□□□□ -0.92
SNRNP70-204ENST00000595231 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
SNRNP70-204ENST00000595231 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
SNRNP70-204ENST00000595231 SPINT4Q6UDR6 99 aa9.27□□□□□ -0.93
SNRNP70-204ENST00000595231 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
SNRNP70-204ENST00000595231 CAMK2N1Q7Z7J9 78 aa9.23□□□□□ -0.93
SNRNP70-204ENST00000595231 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
SNRNP70-204ENST00000595231 SYNE2Q8WXH0 6885 aaKnown RBP9.15□□□□□ -0.95
SNRNP70-204ENST00000595231 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
SNRNP70-204ENST00000595231 A6NED7 52 aa9.04□□□□□ -0.96
SNRNP70-204ENST00000595231 KRTAP10-7P60409 375 aaPredicted RBP9.04□□□□□ -0.96
SNRNP70-204ENST00000595231 KMT2DO14686 5537 aa9.03□□□□□ -0.96
SNRNP70-204ENST00000595231 KRTAP10-12P60413 245 aa8.98□□□□□ -0.97
SNRNP70-204ENST00000595231 KRTAP6-3Q3LI67 103 aa8.93□□□□□ -0.98
SNRNP70-204ENST00000595231 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
SNRNP70-204ENST00000595231 KRTAP4-8Q9BYQ9 185 aa8.88□□□□□ -0.99
SNRNP70-204ENST00000595231 CDC42SE1Q9NRR8 79 aa8.88□□□□□ -0.99
SNRNP70-204ENST00000595231 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
SNRNP70-204ENST00000595231 K7ERS5 55 aa8.81□□□□□ -1
SNRNP70-204ENST00000595231 KRTAP5-9P26371 169 aa8.79□□□□□ -1
SNRNP70-204ENST00000595231 KRTAP8-1Q8IUC2 63 aa8.78□□□□□ -1
SNRNP70-204ENST00000595231 BRK1Q8WUW1 75 aa8.76□□□□□ -1.01
SNRNP70-204ENST00000595231 MUC12Q9UKN1 5478 aa8.69□□□□□ -1.02
SNRNP70-204ENST00000595231 TNP1P09430 55 aa8.67□□□□□ -1.02
SNRNP70-204ENST00000595231 SPRR2FQ96RM1 72 aa8.63□□□□□ -1.03
SNRNP70-204ENST00000595231 MDN1Q9NU22 5596 aa8.56□□□□□ -1.04
SNRNP70-204ENST00000595231 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
SNRNP70-204ENST00000595231 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
SNRNP70-204ENST00000595231 NEBP20929 6669 aa8.47□□□□□ -1.05
SNRNP70-204ENST00000595231 KRTAP19-7Q3SYF9 63 aa8.46□□□□□ -1.06
SNRNP70-204ENST00000595231 PRO0628Q9UI54 55 aa8.44□□□□□ -1.06
SNRNP70-204ENST00000595231 ROMO1P60602 79 aa8.38□□□□□ -1.07
SNRNP70-204ENST00000595231 KRTAP19-5Q3LI72 72 aa8.37□□□□□ -1.07
SNRNP70-204ENST00000595231 LCE1AQ5T7P2 110 aa8.37□□□□□ -1.07
SNRNP70-204ENST00000595231 SPRR2EP22531 72 aa8.36□□□□□ -1.07
SNRNP70-204ENST00000595231 SPRR2BP35325 72 aa8.36□□□□□ -1.07
SNRNP70-204ENST00000595231 SPRR2AP35326 72 aa8.36□□□□□ -1.07
SNRNP70-204ENST00000595231 MT1EP04732 61 aa8.33□□□□□ -1.08
SNRNP70-204ENST00000595231 PMAIP1Q13794 54 aa8.27□□□□□ -1.08
SNRNP70-204ENST00000595231 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms