RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 A8MUN3 132 aa10.73□□□□□ -0.69
PNKP-205ENST00000595081 FSIP2Q5CZC0 6907 aa10.72□□□□□ -0.69
PNKP-205ENST00000595081 SERP2Q8N6R1 65 aa10.63□□□□□ -0.71
PNKP-205ENST00000595081 CRCT1Q9UGL9 99 aa10.63□□□□□ -0.71
PNKP-205ENST00000595081 LCE2BO14633 110 aa10.62□□□□□ -0.71
PNKP-205ENST00000595081 SNURFQ9Y675 71 aa10.62□□□□□ -0.71
PNKP-205ENST00000595081 NDUFC1O43677 76 aa10.61□□□□□ -0.71
PNKP-205ENST00000595081 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
PNKP-205ENST00000595081 USH2AO75445 5202 aa10.59□□□□□ -0.71
PNKP-205ENST00000595081 C20orf197Q8N268 126 aa10.56□□□□□ -0.72
PNKP-205ENST00000595081 COX7CP15954 63 aa10.42□□□□□ -0.74
PNKP-205ENST00000595081 ACYP2P14621 99 aa10.41□□□□□ -0.74
PNKP-205ENST00000595081 KRTAP19-1Q8IUB9 90 aa10.39□□□□□ -0.75
PNKP-205ENST00000595081 SSPOA2VEC9 5147 aa10.39□□□□□ -0.75
PNKP-205ENST00000595081 H0YAA0 97 aa10.38□□□□□ -0.75
PNKP-205ENST00000595081 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
PNKP-205ENST00000595081 ADM2Q7Z4H4 148 aa10.34□□□□□ -0.75
PNKP-205ENST00000595081 SPRR2GQ9BYE4 73 aa10.3□□□□□ -0.76
PNKP-205ENST00000595081 ANAPC13Q9BS18 74 aa10.28□□□□□ -0.76
PNKP-205ENST00000595081 CHKB-CPT1BH3BT56 60 aa10.25□□□□□ -0.77
PNKP-205ENST00000595081 CYSTM1Q9H1C7 97 aa10.25□□□□□ -0.77
PNKP-205ENST00000595081 CRIPTQ9P021 101 aa10.25□□□□□ -0.77
PNKP-205ENST00000595081 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
PNKP-205ENST00000595081 H7BZZ5 65 aa10.18□□□□□ -0.78
PNKP-205ENST00000595081 P0C880 135 aa10.17□□□□□ -0.78
PNKP-205ENST00000595081 KRTAP19-8Q3LI54 63 aa10.17□□□□□ -0.78
PNKP-205ENST00000595081 MT1BP07438 61 aa10.15□□□□□ -0.78
PNKP-205ENST00000595081 KRTAP19-6Q3LI70 58 aa10.15□□□□□ -0.78
PNKP-205ENST00000595081 KRTAP3-2Q9BYR7 98 aa10.15□□□□□ -0.78
PNKP-205ENST00000595081 Q5VV11 94 aa10.14□□□□□ -0.79
PNKP-205ENST00000595081 FCGBPQ9Y6R7 5405 aaPredicted RBP10.12□□□□□ -0.79
PNKP-205ENST00000595081 CCDC179H3BU77 68 aa10.1□□□□□ -0.79
PNKP-205ENST00000595081 COA5Q86WW8 74 aa10.09□□□□□ -0.79
PNKP-205ENST00000595081 R4GN34 69 aa10.01□□□□□ -0.81
PNKP-205ENST00000595081 M0QZ58 72 aa9.98□□□□□ -0.81
PNKP-205ENST00000595081 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.89□□□□□ -0.83
PNKP-205ENST00000595081 A6NN06 94 aa9.84□□□□□ -0.83
PNKP-205ENST00000595081 LINC01554Q52M75 96 aa9.83□□□□□ -0.84
PNKP-205ENST00000595081 KRTAP10-5P60370 271 aa9.8□□□□□ -0.84
PNKP-205ENST00000595081 ATP5EP56381 51 aaPredicted RBP9.77□□□□□ -0.85
PNKP-205ENST00000595081 PLAC4Q8WY50 150 aa9.76□□□□□ -0.85
PNKP-205ENST00000595081 SEC61GP60059 68 aa9.71□□□□□ -0.86
PNKP-205ENST00000595081 TMEM258P61165 79 aa9.69□□□□□ -0.86
PNKP-205ENST00000595081 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
PNKP-205ENST00000595081 MACF1Q9UPN3 7388 aaKnown RBP9.68□□□□□ -0.86
PNKP-205ENST00000595081 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
PNKP-205ENST00000595081 KRTAP9-7A8MTY7 169 aa9.63□□□□□ -0.87
PNKP-205ENST00000595081 MT1XP80297 61 aa9.61□□□□□ -0.87
PNKP-205ENST00000595081 PRO2289Q9P1D8 64 aa9.57□□□□□ -0.88
PNKP-205ENST00000595081 A0A1B0GU69 56 aa9.54□□□□□ -0.88
PNKP-205ENST00000595081 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
PNKP-205ENST00000595081 A0A1B0GU33 70 aa9.53□□□□□ -0.88
PNKP-205ENST00000595081 SPATA8Q6RVD6 105 aa9.49□□□□□ -0.89
PNKP-205ENST00000595081 A0A0D9SG42 100 aa9.43□□□□□ -0.9
PNKP-205ENST00000595081 LINC01558Q9Y6Z2 57 aa9.38□□□□□ -0.91
PNKP-205ENST00000595081 KRTAP6-3Q3LI67 103 aa9.36□□□□□ -0.91
PNKP-205ENST00000595081 PRR15LQ9BU68 103 aa9.35□□□□□ -0.91
PNKP-205ENST00000595081 PCP4P48539 62 aa9.28□□□□□ -0.92
PNKP-205ENST00000595081 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
PNKP-205ENST00000595081 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
PNKP-205ENST00000595081 SPINT4Q6UDR6 99 aa9.25□□□□□ -0.93
PNKP-205ENST00000595081 SMIM26A0A096LP01 95 aa9.24□□□□□ -0.93
PNKP-205ENST00000595081 A8MU10 97 aa9.24□□□□□ -0.93
PNKP-205ENST00000595081 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
PNKP-205ENST00000595081 KRTAP10-7P60409 375 aaPredicted RBP9.2□□□□□ -0.94
PNKP-205ENST00000595081 KMT2DO14686 5537 aa9.2□□□□□ -0.94
PNKP-205ENST00000595081 KRTAP10-12P60413 245 aa9.11□□□□□ -0.95
PNKP-205ENST00000595081 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
PNKP-205ENST00000595081 KRTAP4-8A0A0G2JLE6 195 aa9.09□□□□□ -0.95
PNKP-205ENST00000595081 KRTAP4-8Q9BYQ9 185 aa9.09□□□□□ -0.95
PNKP-205ENST00000595081 UQCR11O14957 56 aa9.06□□□□□ -0.96
PNKP-205ENST00000595081 KRTAP8-1Q8IUC2 63 aa9.06□□□□□ -0.96
PNKP-205ENST00000595081 V9GYY9 64 aa9.05□□□□□ -0.96
PNKP-205ENST00000595081 Q1T7F1 81 aa9.04□□□□□ -0.96
PNKP-205ENST00000595081 PSPHP1O15172 72 aa9.02□□□□□ -0.97
PNKP-205ENST00000595081 MUC12Q9UKN1 5478 aa9.01□□□□□ -0.97
PNKP-205ENST00000595081 SPRR2FQ96RM1 72 aa8.97□□□□□ -0.97
PNKP-205ENST00000595081 RPS28P62857 69 aaKnown RBP8.92□□□□□ -0.98
PNKP-205ENST00000595081 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
PNKP-205ENST00000595081 NEBP20929 6669 aa8.92□□□□□ -0.98
PNKP-205ENST00000595081 MDN1Q9NU22 5596 aa8.87□□□□□ -0.99
PNKP-205ENST00000595081 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
PNKP-205ENST00000595081 SPRR2EP22531 72 aa8.73□□□□□ -1.01
PNKP-205ENST00000595081 SPRR2BP35325 72 aa8.73□□□□□ -1.01
PNKP-205ENST00000595081 SPRR2AP35326 72 aa8.73□□□□□ -1.01
PNKP-205ENST00000595081 A6NED7 52 aa8.71□□□□□ -1.02
PNKP-205ENST00000595081 LCE1AQ5T7P2 110 aa8.67□□□□□ -1.02
PNKP-205ENST00000595081 TNP1P09430 55 aa8.65□□□□□ -1.02
PNKP-205ENST00000595081 K7ERS5 55 aa8.63□□□□□ -1.03
PNKP-205ENST00000595081 KRTAP19-7Q3SYF9 63 aa8.58□□□□□ -1.04
PNKP-205ENST00000595081 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
PNKP-205ENST00000595081 MT1EP04732 61 aa8.49□□□□□ -1.05
PNKP-205ENST00000595081 KRTAP19-5Q3LI72 72 aa8.49□□□□□ -1.05
PNKP-205ENST00000595081 KRTAP20-1Q3LI63 56 aa8.48□□□□□ -1.05
PNKP-205ENST00000595081 SPRR2DP22532 72 aa8.43□□□□□ -1.06
PNKP-205ENST00000595081 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
PNKP-205ENST00000595081 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
PNKP-205ENST00000595081 KRTAP2-3P0C7H8 128 aa8.35□□□□□ -1.07
PNKP-205ENST00000595081 KRTAP2-4Q9BYR9 128 aa8.35□□□□□ -1.07
PNKP-205ENST00000595081 KRTAP19-3Q7Z4W3 81 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 275.6 ms