RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 ACYP2P14621 99 aa8.75□□□□□ -1.01
GTF2F1-205ENST00000595047 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
GTF2F1-205ENST00000595047 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
GTF2F1-205ENST00000595047 H7BZZ5 65 aa8.73□□□□□ -1.01
GTF2F1-205ENST00000595047 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
GTF2F1-205ENST00000595047 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
GTF2F1-205ENST00000595047 MT2AP02795 61 aa8.62□□□□□ -1.03
GTF2F1-205ENST00000595047 CHKB-CPT1BH3BT56 60 aa8.61□□□□□ -1.03
GTF2F1-205ENST00000595047 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
GTF2F1-205ENST00000595047 MT1FP04733 61 aa8.56□□□□□ -1.04
GTF2F1-205ENST00000595047 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
GTF2F1-205ENST00000595047 COA5Q86WW8 74 aa8.53□□□□□ -1.04
GTF2F1-205ENST00000595047 ATP5EP56381 51 aaPredicted RBP8.48□□□□□ -1.05
GTF2F1-205ENST00000595047 TMEM258P61165 79 aa8.47□□□□□ -1.05
GTF2F1-205ENST00000595047 H0YAA0 97 aa8.46□□□□□ -1.06
GTF2F1-205ENST00000595047 PCP4P48539 62 aa8.45□□□□□ -1.06
GTF2F1-205ENST00000595047 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
GTF2F1-205ENST00000595047 ADM2Q7Z4H4 148 aa8.43□□□□□ -1.06
GTF2F1-205ENST00000595047 KRTAP9-3Q9BYQ3 159 aa8.4□□□□□ -1.06
GTF2F1-205ENST00000595047 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
GTF2F1-205ENST00000595047 KRTAP3-2Q9BYR7 98 aa8.3□□□□□ -1.08
GTF2F1-205ENST00000595047 P0C880 135 aa8.29□□□□□ -1.08
GTF2F1-205ENST00000595047 CRIPTQ9P021 101 aa8.28□□□□□ -1.08
GTF2F1-205ENST00000595047 LCE2BO14633 110 aa8.24□□□□□ -1.09
GTF2F1-205ENST00000595047 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
GTF2F1-205ENST00000595047 SVIPQ8NHG7 77 aa8.22□□□□□ -1.09
GTF2F1-205ENST00000595047 SERP1Q9Y6X1 66 aa8.22□□□□□ -1.09
GTF2F1-205ENST00000595047 SEC61GP60059 68 aa8.21□□□□□ -1.1
GTF2F1-205ENST00000595047 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.1
GTF2F1-205ENST00000595047 R4GN34 69 aa8.17□□□□□ -1.1
GTF2F1-205ENST00000595047 M0QZ58 72 aa8.12□□□□□ -1.11
GTF2F1-205ENST00000595047 A0A1B0GU69 56 aa8.1□□□□□ -1.11
GTF2F1-205ENST00000595047 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
GTF2F1-205ENST00000595047 Q5VV11 94 aa8.06□□□□□ -1.12
GTF2F1-205ENST00000595047 USH2AO75445 5202 aa8.05□□□□□ -1.12
GTF2F1-205ENST00000595047 LINC01558Q9Y6Z2 57 aa8.04□□□□□ -1.12
GTF2F1-205ENST00000595047 PRR15LQ9BU68 103 aa8.01□□□□□ -1.13
GTF2F1-205ENST00000595047 CRCT1Q9UGL9 99 aa8.01□□□□□ -1.13
GTF2F1-205ENST00000595047 A0A1B0GU33 70 aa8□□□□□ -1.13
GTF2F1-205ENST00000595047 LINC01554Q52M75 96 aa8□□□□□ -1.13
GTF2F1-205ENST00000595047 MT1BP07438 61 aa7.99□□□□□ -1.13
GTF2F1-205ENST00000595047 FSIP2Q5CZC0 6907 aa7.97□□□□□ -1.13
GTF2F1-205ENST00000595047 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
GTF2F1-205ENST00000595047 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.14
GTF2F1-205ENST00000595047 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
GTF2F1-205ENST00000595047 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
GTF2F1-205ENST00000595047 V9GYY9 64 aa7.92□□□□□ -1.14
GTF2F1-205ENST00000595047 Q1T7F1 81 aa7.88□□□□□ -1.15
GTF2F1-205ENST00000595047 SPATA8Q6RVD6 105 aa7.88□□□□□ -1.15
GTF2F1-205ENST00000595047 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
GTF2F1-205ENST00000595047 SSPOA2VEC9 5147 aa7.86□□□□□ -1.15
GTF2F1-205ENST00000595047 KRTAP19-6Q3LI70 58 aa7.85□□□□□ -1.15
GTF2F1-205ENST00000595047 A0A0D9SG42 100 aa7.81□□□□□ -1.16
GTF2F1-205ENST00000595047 A6NN06 94 aa7.8□□□□□ -1.16
GTF2F1-205ENST00000595047 PSPHP1O15172 72 aa7.8□□□□□ -1.16
GTF2F1-205ENST00000595047 UQCR11O14957 56 aa7.75□□□□□ -1.17
GTF2F1-205ENST00000595047 A8MU10 97 aa7.71□□□□□ -1.18
GTF2F1-205ENST00000595047 KRTAP10-5P60370 271 aa7.71□□□□□ -1.18
GTF2F1-205ENST00000595047 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
GTF2F1-205ENST00000595047 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
GTF2F1-205ENST00000595047 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
GTF2F1-205ENST00000595047 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
GTF2F1-205ENST00000595047 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
GTF2F1-205ENST00000595047 MT1XP80297 61 aa7.62□□□□□ -1.19
GTF2F1-205ENST00000595047 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
GTF2F1-205ENST00000595047 KRTAP12-2P59991 146 aa7.59□□□□□ -1.2
GTF2F1-205ENST00000595047 A6NED7 52 aa7.57□□□□□ -1.2
GTF2F1-205ENST00000595047 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
GTF2F1-205ENST00000595047 K7ERS5 55 aa7.4□□□□□ -1.22
GTF2F1-205ENST00000595047 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
GTF2F1-205ENST00000595047 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
GTF2F1-205ENST00000595047 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
GTF2F1-205ENST00000595047 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
GTF2F1-205ENST00000595047 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
GTF2F1-205ENST00000595047 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
GTF2F1-205ENST00000595047 TNP1P09430 55 aa7.15□□□□□ -1.26
GTF2F1-205ENST00000595047 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
GTF2F1-205ENST00000595047 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
GTF2F1-205ENST00000595047 KRTAP6-3Q3LI67 103 aa7.12□□□□□ -1.27
GTF2F1-205ENST00000595047 BRK1Q8WUW1 75 aa7.11□□□□□ -1.27
GTF2F1-205ENST00000595047 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
GTF2F1-205ENST00000595047 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
GTF2F1-205ENST00000595047 KMT2DO14686 5537 aa7.05□□□□□ -1.28
GTF2F1-205ENST00000595047 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
GTF2F1-205ENST00000595047 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
GTF2F1-205ENST00000595047 ROMO1P60602 79 aa6.98□□□□□ -1.29
GTF2F1-205ENST00000595047 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
GTF2F1-205ENST00000595047 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
GTF2F1-205ENST00000595047 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
GTF2F1-205ENST00000595047 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
GTF2F1-205ENST00000595047 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
GTF2F1-205ENST00000595047 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
GTF2F1-205ENST00000595047 MT1EP04732 61 aa6.72□□□□□ -1.33
GTF2F1-205ENST00000595047 SPRR2EP22531 72 aa6.72□□□□□ -1.33
GTF2F1-205ENST00000595047 SPRR2BP35325 72 aa6.72□□□□□ -1.33
GTF2F1-205ENST00000595047 SPRR2AP35326 72 aa6.72□□□□□ -1.33
GTF2F1-205ENST00000595047 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
GTF2F1-205ENST00000595047 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
GTF2F1-205ENST00000595047 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
GTF2F1-205ENST00000595047 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms