RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
TRIM28-205ENST00000595028 LCA10Q71F78 164 aa6.99□□□□□ -1.29
TRIM28-205ENST00000595028 FAM236AA0A1B0GUQ0 79 aa6.97□□□□□ -1.29
TRIM28-205ENST00000595028 FAM236BA0A1B0GV22 79 aa6.97□□□□□ -1.29
TRIM28-205ENST00000595028 UQCRQO14949 82 aa6.96□□□□□ -1.3
TRIM28-205ENST00000595028 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
TRIM28-205ENST00000595028 H0Y9P7 68 aa6.92□□□□□ -1.3
TRIM28-205ENST00000595028 ATOX1O00244 68 aa6.92□□□□□ -1.3
TRIM28-205ENST00000595028 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
TRIM28-205ENST00000595028 PCP4P48539 62 aa6.9□□□□□ -1.3
TRIM28-205ENST00000595028 SMIM20Q8N5G0 67 aa6.9□□□□□ -1.3
TRIM28-205ENST00000595028 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
TRIM28-205ENST00000595028 MP68P56378 58 aa6.87□□□□□ -1.31
TRIM28-205ENST00000595028 MDN1Q9NU22 5596 aa6.85□□□□□ -1.31
TRIM28-205ENST00000595028 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
TRIM28-205ENST00000595028 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
TRIM28-205ENST00000595028 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
TRIM28-205ENST00000595028 H3BPC8 53 aa6.8□□□□□ -1.32
TRIM28-205ENST00000595028 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
TRIM28-205ENST00000595028 A8MUN3 132 aa6.77□□□□□ -1.33
TRIM28-205ENST00000595028 MT1BP07438 61 aa6.77□□□□□ -1.33
TRIM28-205ENST00000595028 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
TRIM28-205ENST00000595028 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
TRIM28-205ENST00000595028 NDUFC1O43677 76 aa6.75□□□□□ -1.33
TRIM28-205ENST00000595028 Q5VV11 94 aa6.75□□□□□ -1.33
TRIM28-205ENST00000595028 KMT2DO14686 5537 aa6.74□□□□□ -1.33
TRIM28-205ENST00000595028 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.34
TRIM28-205ENST00000595028 CRIPTQ9P021 101 aa6.71□□□□□ -1.34
TRIM28-205ENST00000595028 H0YAA0 97 aa6.7□□□□□ -1.34
TRIM28-205ENST00000595028 COX7CP15954 63 aa6.69□□□□□ -1.34
TRIM28-205ENST00000595028 C20orf197Q8N268 126 aa6.68□□□□□ -1.34
TRIM28-205ENST00000595028 SNURFQ9Y675 71 aa6.67□□□□□ -1.34
TRIM28-205ENST00000595028 A6NN06 94 aa6.66□□□□□ -1.34
TRIM28-205ENST00000595028 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.34
TRIM28-205ENST00000595028 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.34
TRIM28-205ENST00000595028 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
TRIM28-205ENST00000595028 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
TRIM28-205ENST00000595028 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
TRIM28-205ENST00000595028 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
TRIM28-205ENST00000595028 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
TRIM28-205ENST00000595028 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
TRIM28-205ENST00000595028 P0C880 135 aa6.47□□□□□ -1.37
TRIM28-205ENST00000595028 ACYP2P14621 99 aa6.47□□□□□ -1.37
TRIM28-205ENST00000595028 CYSTM1Q9H1C7 97 aa6.47□□□□□ -1.37
TRIM28-205ENST00000595028 H7BZZ5 65 aa6.46□□□□□ -1.38
TRIM28-205ENST00000595028 R4GN34 69 aa6.44□□□□□ -1.38
TRIM28-205ENST00000595028 GPR98Q8WXG9 6306 aa6.43□□□□□ -1.38
TRIM28-205ENST00000595028 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
TRIM28-205ENST00000595028 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
TRIM28-205ENST00000595028 M0QZ58 72 aa6.4□□□□□ -1.38
TRIM28-205ENST00000595028 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.38
TRIM28-205ENST00000595028 KRTAP2-1Q9BYU5 128 aa6.4□□□□□ -1.38
TRIM28-205ENST00000595028 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
TRIM28-205ENST00000595028 MT1XP80297 61 aa6.36□□□□□ -1.39
TRIM28-205ENST00000595028 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
TRIM28-205ENST00000595028 SPRR2EP22531 72 aa6.34□□□□□ -1.39
TRIM28-205ENST00000595028 SPRR2BP35325 72 aa6.34□□□□□ -1.39
TRIM28-205ENST00000595028 SPRR2AP35326 72 aa6.34□□□□□ -1.39
TRIM28-205ENST00000595028 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
TRIM28-205ENST00000595028 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
TRIM28-205ENST00000595028 TMEM258P61165 79 aa6.32□□□□□ -1.4
TRIM28-205ENST00000595028 COA5Q86WW8 74 aa6.32□□□□□ -1.4
TRIM28-205ENST00000595028 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
TRIM28-205ENST00000595028 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
TRIM28-205ENST00000595028 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
TRIM28-205ENST00000595028 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
TRIM28-205ENST00000595028 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
TRIM28-205ENST00000595028 SPRR2DP22532 72 aa6.14□□□□□ -1.43
TRIM28-205ENST00000595028 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
TRIM28-205ENST00000595028 SERP1Q9Y6X1 66 aa6.12□□□□□ -1.43
TRIM28-205ENST00000595028 SEC61GP60059 68 aa6.09□□□□□ -1.43
TRIM28-205ENST00000595028 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
TRIM28-205ENST00000595028 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
TRIM28-205ENST00000595028 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
TRIM28-205ENST00000595028 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
TRIM28-205ENST00000595028 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
TRIM28-205ENST00000595028 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
TRIM28-205ENST00000595028 A0A1B0GU69 56 aa6.01□□□□□ -1.45
TRIM28-205ENST00000595028 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
TRIM28-205ENST00000595028 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
TRIM28-205ENST00000595028 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.46
TRIM28-205ENST00000595028 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
TRIM28-205ENST00000595028 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
TRIM28-205ENST00000595028 V9GYY9 64 aa5.92□□□□□ -1.46
TRIM28-205ENST00000595028 A0A1B0GU33 70 aa5.9□□□□□ -1.46
TRIM28-205ENST00000595028 A0A0D9SG42 100 aa5.88□□□□□ -1.47
TRIM28-205ENST00000595028 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
TRIM28-205ENST00000595028 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
TRIM28-205ENST00000595028 Q1T7F1 81 aa5.85□□□□□ -1.47
TRIM28-205ENST00000595028 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
TRIM28-205ENST00000595028 PSPHP1O15172 72 aa5.8□□□□□ -1.48
TRIM28-205ENST00000595028 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
TRIM28-205ENST00000595028 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
TRIM28-205ENST00000595028 UQCR11O14957 56 aa5.76□□□□□ -1.49
TRIM28-205ENST00000595028 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
TRIM28-205ENST00000595028 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
TRIM28-205ENST00000595028 A8MU10 97 aa5.68□□□□□ -1.5
TRIM28-205ENST00000595028 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
TRIM28-205ENST00000595028 MIR22HGQ0VDD5 57 aa5.67□□□□□ -1.5
TRIM28-205ENST00000595028 A6NED7 52 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms