RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 LCE2CQ5TA81 110 aa12.66□□□□□ -0.38
LDLRAD4-218ENST00000592991 FAT4Q6V0I7 4981 aa12.64□□□□□ -0.39
LDLRAD4-218ENST00000592991 FLGP20930 4061 aaPredicted RBP12.62□□□□□ -0.39
LDLRAD4-218ENST00000592991 V9GYY9 64 aa12.59□□□□□ -0.39
LDLRAD4-218ENST00000592991 CHKB-CPT1BH3BT56 60 aa12.58□□□□□ -0.4
LDLRAD4-218ENST00000592991 S4R3F8 94 aa12.58□□□□□ -0.4
LDLRAD4-218ENST00000592991 LCA10Q71F78 164 aa12.56□□□□□ -0.4
LDLRAD4-218ENST00000592991 KRTAP3-3Q9BYR6 98 aa12.5□□□□□ -0.41
LDLRAD4-218ENST00000592991 LINC01558Q9Y6Z2 57 aa12.46□□□□□ -0.41
LDLRAD4-218ENST00000592991 MT1HP80294 61 aa12.41□□□□□ -0.42
LDLRAD4-218ENST00000592991 PSPHP1O15172 72 aa12.38□□□□□ -0.43
LDLRAD4-218ENST00000592991 PRR15LQ9BU68 103 aa12.33□□□□□ -0.43
LDLRAD4-218ENST00000592991 Q5VV11 94 aa12.31□□□□□ -0.44
LDLRAD4-218ENST00000592991 SPTSSBQ8NFR3 76 aa12.29□□□□□ -0.44
LDLRAD4-218ENST00000592991 CSAG1Q6PB30 78 aa12.29□□□□□ -0.44
LDLRAD4-218ENST00000592991 M0R2T5 61 aa12.26□□□□□ -0.45
LDLRAD4-218ENST00000592991 A0A1B0GU69 56 aa12.15□□□□□ -0.47
LDLRAD4-218ENST00000592991 LCE2AQ5TA79 106 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD4-218ENST00000592991 BRK1Q8WUW1 75 aa12.02□□□□□ -0.49
LDLRAD4-218ENST00000592991 ADM2Q7Z4H4 148 aa12.01□□□□□ -0.49
LDLRAD4-218ENST00000592991 SEC61GP60059 68 aa12□□□□□ -0.49
LDLRAD4-218ENST00000592991 A6NED7 52 aa12□□□□□ -0.49
LDLRAD4-218ENST00000592991 KRTAP10-6P60371 365 aaPredicted RBP12□□□□□ -0.49
LDLRAD4-218ENST00000592991 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
LDLRAD4-218ENST00000592991 H0YAA0 97 aa11.93□□□□□ -0.5
LDLRAD4-218ENST00000592991 P0C880 135 aa11.93□□□□□ -0.5
LDLRAD4-218ENST00000592991 LORP23490 312 aaPredicted RBP11.92□□□□□ -0.5
LDLRAD4-218ENST00000592991 KRTAP9-8Q9BYQ0 159 aa11.9□□□□□ -0.5
LDLRAD4-218ENST00000592991 PRO0628Q9UI54 55 aa11.9□□□□□ -0.5
LDLRAD4-218ENST00000592991 MT2AP02795 61 aa11.86□□□□□ -0.51
LDLRAD4-218ENST00000592991 CDC42SE1Q9NRR8 79 aa11.86□□□□□ -0.51
LDLRAD4-218ENST00000592991 UQCR11O14957 56 aa11.84□□□□□ -0.51
LDLRAD4-218ENST00000592991 A8MU10 97 aa11.82□□□□□ -0.52
LDLRAD4-218ENST00000592991 MT1FP04733 61 aa11.81□□□□□ -0.52
LDLRAD4-218ENST00000592991 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
LDLRAD4-218ENST00000592991 A0A1B0GU33 70 aa11.74□□□□□ -0.53
LDLRAD4-218ENST00000592991 KRTAP10-10P60014 251 aa11.74□□□□□ -0.53
LDLRAD4-218ENST00000592991 MIR22HGQ0VDD5 57 aa11.71□□□□□ -0.53
LDLRAD4-218ENST00000592991 KRTAP13-4Q3LI77 160 aa11.62□□□□□ -0.55
LDLRAD4-218ENST00000592991 M0QZ58 72 aa11.57□□□□□ -0.56
LDLRAD4-218ENST00000592991 R4GN34 69 aa11.56□□□□□ -0.56
LDLRAD4-218ENST00000592991 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
LDLRAD4-218ENST00000592991 KRTAP9-3Q9BYQ3 159 aa11.49□□□□□ -0.57
LDLRAD4-218ENST00000592991 KRTAP19-1Q8IUB9 90 aa11.46□□□□□ -0.57
LDLRAD4-218ENST00000592991 LINC01554Q52M75 96 aa11.42□□□□□ -0.58
LDLRAD4-218ENST00000592991 SPRR2GQ9BYE4 73 aa11.41□□□□□ -0.58
LDLRAD4-218ENST00000592991 SVIPQ8NHG7 77 aa11.4□□□□□ -0.58
LDLRAD4-218ENST00000592991 A0A0D9SG42 100 aa11.38□□□□□ -0.59
LDLRAD4-218ENST00000592991 PMAIP1Q13794 54 aa11.38□□□□□ -0.59
LDLRAD4-218ENST00000592991 A6NN06 94 aa11.33□□□□□ -0.6
LDLRAD4-218ENST00000592991 LCE2BO14633 110 aa11.25□□□□□ -0.61
LDLRAD4-218ENST00000592991 KRTAP19-8Q3LI54 63 aa11.17□□□□□ -0.62
LDLRAD4-218ENST00000592991 K7ERS5 55 aa11.12□□□□□ -0.63
LDLRAD4-218ENST00000592991 KRTAP12-1P59990 96 aa11.11□□□□□ -0.63
LDLRAD4-218ENST00000592991 MT1BP07438 61 aa11.1□□□□□ -0.63
LDLRAD4-218ENST00000592991 SPINT4Q6UDR6 99 aa11.1□□□□□ -0.63
LDLRAD4-218ENST00000592991 KRTAP12-2P59991 146 aa11.09□□□□□ -0.63
LDLRAD4-218ENST00000592991 USH2AO75445 5202 aa11.07□□□□□ -0.64
LDLRAD4-218ENST00000592991 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
LDLRAD4-218ENST00000592991 KTN1-AS1Q86SY8 53 aa10.98□□□□□ -0.65
LDLRAD4-218ENST00000592991 PLAC4Q8WY50 150 aa10.96□□□□□ -0.65
LDLRAD4-218ENST00000592991 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
LDLRAD4-218ENST00000592991 CAMK2N1Q7Z7J9 78 aa10.8□□□□□ -0.68
LDLRAD4-218ENST00000592991 FSIP2Q5CZC0 6907 aa10.79□□□□□ -0.68
LDLRAD4-218ENST00000592991 SSPOA2VEC9 5147 aa10.79□□□□□ -0.68
LDLRAD4-218ENST00000592991 ROMO1P60602 79 aa10.73□□□□□ -0.69
LDLRAD4-218ENST00000592991 MT1XP80297 61 aa10.67□□□□□ -0.7
LDLRAD4-218ENST00000592991 KRTAP10-5P60370 271 aa10.64□□□□□ -0.71
LDLRAD4-218ENST00000592991 PRAC1Q96KF2 57 aa10.64□□□□□ -0.71
LDLRAD4-218ENST00000592991 KRTAP19-6Q3LI70 58 aa10.56□□□□□ -0.72
LDLRAD4-218ENST00000592991 C10orf95Q9H7T3 257 aa10.55□□□□□ -0.72
LDLRAD4-218ENST00000592991 PRO2289Q9P1D8 64 aa10.48□□□□□ -0.73
LDLRAD4-218ENST00000592991 CRCT1Q9UGL9 99 aa10.4□□□□□ -0.74
LDLRAD4-218ENST00000592991 KRTAP25-1Q3LHN0 102 aa10.37□□□□□ -0.75
LDLRAD4-218ENST00000592991 FCGBPQ9Y6R7 5405 aaPredicted RBP10.33□□□□□ -0.76
LDLRAD4-218ENST00000592991 KRTAP10-7P60409 375 aaPredicted RBP10.26□□□□□ -0.77
LDLRAD4-218ENST00000592991 TNP1P09430 55 aa10.2□□□□□ -0.78
LDLRAD4-218ENST00000592991 KRTAP9-6A0A140TA67 174 aa10.1□□□□□ -0.79
LDLRAD4-218ENST00000592991 KRTAP10-12P60413 245 aa10.07□□□□□ -0.8
LDLRAD4-218ENST00000592991 KMT2DO14686 5537 aa10.04□□□□□ -0.8
LDLRAD4-218ENST00000592991 KRTAP4-8A0A0G2JLE6 195 aa9.96□□□□□ -0.82
LDLRAD4-218ENST00000592991 KRTAP4-8Q9BYQ9 185 aa9.96□□□□□ -0.82
LDLRAD4-218ENST00000592991 LCE3AQ5TA76 89 aa9.92□□□□□ -0.82
LDLRAD4-218ENST00000592991 MACF1Q9UPN3 7388 aaKnown RBP9.89□□□□□ -0.83
LDLRAD4-218ENST00000592991 PP632Q6XCG6 107 aa9.87□□□□□ -0.83
LDLRAD4-218ENST00000592991 KRTAP23-1A1A580 65 aa9.85□□□□□ -0.83
LDLRAD4-218ENST00000592991 KRTAP8-1Q8IUC2 63 aa9.67□□□□□ -0.86
LDLRAD4-218ENST00000592991 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.66□□□□□ -0.86
LDLRAD4-218ENST00000592991 SYNE2Q8WXH0 6885 aaKnown RBP9.62□□□□□ -0.87
LDLRAD4-218ENST00000592991 KRTAP19-5Q3LI72 72 aa9.6□□□□□ -0.87
LDLRAD4-218ENST00000592991 KRTAP19-7Q3SYF9 63 aa9.53□□□□□ -0.88
LDLRAD4-218ENST00000592991 KRTAP12-3P60328 96 aa9.48□□□□□ -0.89
LDLRAD4-218ENST00000592991 SPRR2FQ96RM1 72 aa9.41□□□□□ -0.9
LDLRAD4-218ENST00000592991 MT1EP04732 61 aa9.37□□□□□ -0.91
LDLRAD4-218ENST00000592991 MUC12Q9UKN1 5478 aa9.35□□□□□ -0.91
LDLRAD4-218ENST00000592991 KRTAP5-9P26371 169 aa9.33□□□□□ -0.92
LDLRAD4-218ENST00000592991 KRTAP6-3Q3LI67 103 aa9.3□□□□□ -0.92
LDLRAD4-218ENST00000592991 KRTAP15-1Q3LI76 137 aa9.25□□□□□ -0.93
LDLRAD4-218ENST00000592991 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.93
LDLRAD4-218ENST00000592991 MT1LQ93083 61 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms