RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
RPRD1A-209ENST00000590898 ACYP2P14621 99 aa8.48□□□□□ -1.05
RPRD1A-209ENST00000590898 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.05
RPRD1A-209ENST00000590898 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
RPRD1A-209ENST00000590898 SMIM26A0A096LP01 95 aa8.43□□□□□ -1.06
RPRD1A-209ENST00000590898 M0R2T5 61 aa8.41□□□□□ -1.06
RPRD1A-209ENST00000590898 A8MUN3 132 aa8.39□□□□□ -1.07
RPRD1A-209ENST00000590898 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
RPRD1A-209ENST00000590898 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
RPRD1A-209ENST00000590898 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
RPRD1A-209ENST00000590898 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
RPRD1A-209ENST00000590898 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
RPRD1A-209ENST00000590898 Q1T7F1 81 aa8.27□□□□□ -1.09
RPRD1A-209ENST00000590898 S4R3F8 94 aa8.24□□□□□ -1.09
RPRD1A-209ENST00000590898 PSPHP1O15172 72 aa8.21□□□□□ -1.09
RPRD1A-209ENST00000590898 LCA10Q71F78 164 aa8.2□□□□□ -1.1
RPRD1A-209ENST00000590898 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
RPRD1A-209ENST00000590898 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
RPRD1A-209ENST00000590898 V9GYY9 64 aa8.17□□□□□ -1.1
RPRD1A-209ENST00000590898 CSAG1Q6PB30 78 aa8.16□□□□□ -1.1
RPRD1A-209ENST00000590898 PRR15LQ9BU68 103 aa8.16□□□□□ -1.1
RPRD1A-209ENST00000590898 Q5VV11 94 aa8.11□□□□□ -1.11
RPRD1A-209ENST00000590898 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
RPRD1A-209ENST00000590898 MT2AP02795 61 aa8.07□□□□□ -1.12
RPRD1A-209ENST00000590898 A0A1B0GU69 56 aa8.05□□□□□ -1.12
RPRD1A-209ENST00000590898 MT1FP04733 61 aa8□□□□□ -1.13
RPRD1A-209ENST00000590898 KRTAP10-10P60014 251 aa8□□□□□ -1.13
RPRD1A-209ENST00000590898 H0YAA0 97 aa7.93□□□□□ -1.14
RPRD1A-209ENST00000590898 SEC61GP60059 68 aa7.93□□□□□ -1.14
RPRD1A-209ENST00000590898 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
RPRD1A-209ENST00000590898 A6NED7 52 aa7.9□□□□□ -1.14
RPRD1A-209ENST00000590898 KRTAP9-3Q9BYQ3 159 aa7.9□□□□□ -1.15
RPRD1A-209ENST00000590898 A8MU10 97 aa7.89□□□□□ -1.15
RPRD1A-209ENST00000590898 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
RPRD1A-209ENST00000590898 P0C880 135 aa7.84□□□□□ -1.15
RPRD1A-209ENST00000590898 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.16
RPRD1A-209ENST00000590898 A0A1B0GU33 70 aa7.79□□□□□ -1.16
RPRD1A-209ENST00000590898 UQCR11O14957 56 aa7.79□□□□□ -1.16
RPRD1A-209ENST00000590898 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
RPRD1A-209ENST00000590898 CDC42SE1Q9NRR8 79 aa7.75□□□□□ -1.17
RPRD1A-209ENST00000590898 SPATA8Q6RVD6 105 aa7.74□□□□□ -1.17
RPRD1A-209ENST00000590898 LCE2BO14633 110 aa7.73□□□□□ -1.17
RPRD1A-209ENST00000590898 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
RPRD1A-209ENST00000590898 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
RPRD1A-209ENST00000590898 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
RPRD1A-209ENST00000590898 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
RPRD1A-209ENST00000590898 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
RPRD1A-209ENST00000590898 USH2AO75445 5202 aa7.66□□□□□ -1.18
RPRD1A-209ENST00000590898 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
RPRD1A-209ENST00000590898 R4GN34 69 aa7.59□□□□□ -1.19
RPRD1A-209ENST00000590898 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
RPRD1A-209ENST00000590898 CRCT1Q9UGL9 99 aa7.56□□□□□ -1.2
RPRD1A-209ENST00000590898 A0A0D9SG42 100 aa7.56□□□□□ -1.2
RPRD1A-209ENST00000590898 M0QZ58 72 aa7.54□□□□□ -1.2
RPRD1A-209ENST00000590898 SSPOA2VEC9 5147 aa7.5□□□□□ -1.21
RPRD1A-209ENST00000590898 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
RPRD1A-209ENST00000590898 MT1BP07438 61 aa7.48□□□□□ -1.21
RPRD1A-209ENST00000590898 LINC01554Q52M75 96 aa7.46□□□□□ -1.22
RPRD1A-209ENST00000590898 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
RPRD1A-209ENST00000590898 KRTAP19-6Q3LI70 58 aa7.42□□□□□ -1.22
RPRD1A-209ENST00000590898 A6NN06 94 aa7.39□□□□□ -1.23
RPRD1A-209ENST00000590898 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
RPRD1A-209ENST00000590898 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
RPRD1A-209ENST00000590898 SPINT4Q6UDR6 99 aa7.35□□□□□ -1.23
RPRD1A-209ENST00000590898 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
RPRD1A-209ENST00000590898 K7ERS5 55 aa7.29□□□□□ -1.24
RPRD1A-209ENST00000590898 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
RPRD1A-209ENST00000590898 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
RPRD1A-209ENST00000590898 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
RPRD1A-209ENST00000590898 MT1XP80297 61 aa7.13□□□□□ -1.27
RPRD1A-209ENST00000590898 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
RPRD1A-209ENST00000590898 ROMO1P60602 79 aa7.06□□□□□ -1.28
RPRD1A-209ENST00000590898 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
RPRD1A-209ENST00000590898 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
RPRD1A-209ENST00000590898 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
RPRD1A-209ENST00000590898 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
RPRD1A-209ENST00000590898 MACF1Q9UPN3 7388 aaKnown RBP6.94□□□□□ -1.3
RPRD1A-209ENST00000590898 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
RPRD1A-209ENST00000590898 KRTAP10-7P60409 375 aaPredicted RBP6.8□□□□□ -1.32
RPRD1A-209ENST00000590898 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
RPRD1A-209ENST00000590898 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
RPRD1A-209ENST00000590898 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
RPRD1A-209ENST00000590898 KMT2DO14686 5537 aa6.75□□□□□ -1.33
RPRD1A-209ENST00000590898 KRTAP6-3Q3LI67 103 aa6.74□□□□□ -1.33
RPRD1A-209ENST00000590898 TNP1P09430 55 aa6.68□□□□□ -1.34
RPRD1A-209ENST00000590898 KRTAP4-8A0A0G2JLE6 195 aa6.66□□□□□ -1.34
RPRD1A-209ENST00000590898 H3BS24 57 aa6.66□□□□□ -1.34
RPRD1A-209ENST00000590898 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
RPRD1A-209ENST00000590898 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
RPRD1A-209ENST00000590898 KRTAP5-9P26371 169 aa6.64□□□□□ -1.35
RPRD1A-209ENST00000590898 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
RPRD1A-209ENST00000590898 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
RPRD1A-209ENST00000590898 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
RPRD1A-209ENST00000590898 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
RPRD1A-209ENST00000590898 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
RPRD1A-209ENST00000590898 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
RPRD1A-209ENST00000590898 KRTAP19-7Q3SYF9 63 aa6.37□□□□□ -1.39
RPRD1A-209ENST00000590898 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
RPRD1A-209ENST00000590898 NEBP20929 6669 aa6.3□□□□□ -1.4
RPRD1A-209ENST00000590898 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms