RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
PTBP1-216ENST00000590887 S4R3F8 94 aa6.55□□□□□ -1.36
PTBP1-216ENST00000590887 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
PTBP1-216ENST00000590887 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
PTBP1-216ENST00000590887 Q1T7F1 81 aa6.48□□□□□ -1.37
PTBP1-216ENST00000590887 SEC61GP60059 68 aa6.47□□□□□ -1.37
PTBP1-216ENST00000590887 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
PTBP1-216ENST00000590887 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
PTBP1-216ENST00000590887 LCA10Q71F78 164 aa6.44□□□□□ -1.38
PTBP1-216ENST00000590887 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
PTBP1-216ENST00000590887 A0A1B0GU69 56 aa6.4□□□□□ -1.38
PTBP1-216ENST00000590887 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
PTBP1-216ENST00000590887 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
PTBP1-216ENST00000590887 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
PTBP1-216ENST00000590887 PSPHP1O15172 72 aa6.3□□□□□ -1.4
PTBP1-216ENST00000590887 H0YAA0 97 aa6.28□□□□□ -1.4
PTBP1-216ENST00000590887 M0R2T5 61 aa6.25□□□□□ -1.41
PTBP1-216ENST00000590887 Q5VV11 94 aa6.23□□□□□ -1.41
PTBP1-216ENST00000590887 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
PTBP1-216ENST00000590887 UQCR11O14957 56 aa6.21□□□□□ -1.42
PTBP1-216ENST00000590887 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
PTBP1-216ENST00000590887 A0A1B0GU33 70 aa6.2□□□□□ -1.42
PTBP1-216ENST00000590887 A6NED7 52 aa6.2□□□□□ -1.42
PTBP1-216ENST00000590887 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
PTBP1-216ENST00000590887 MT1HP80294 61 aa6.16□□□□□ -1.42
PTBP1-216ENST00000590887 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
PTBP1-216ENST00000590887 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
PTBP1-216ENST00000590887 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
PTBP1-216ENST00000590887 M0QZ58 72 aa6.11□□□□□ -1.43
PTBP1-216ENST00000590887 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
PTBP1-216ENST00000590887 CRIPTQ9P021 101 aa6.1□□□□□ -1.43
PTBP1-216ENST00000590887 P0C880 135 aa6.08□□□□□ -1.44
PTBP1-216ENST00000590887 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
PTBP1-216ENST00000590887 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
PTBP1-216ENST00000590887 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
PTBP1-216ENST00000590887 R4GN34 69 aa6.06□□□□□ -1.44
PTBP1-216ENST00000590887 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
PTBP1-216ENST00000590887 K7ERS5 55 aa5.99□□□□□ -1.45
PTBP1-216ENST00000590887 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
PTBP1-216ENST00000590887 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
PTBP1-216ENST00000590887 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
PTBP1-216ENST00000590887 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
PTBP1-216ENST00000590887 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
PTBP1-216ENST00000590887 MT2AP02795 61 aa5.9□□□□□ -1.46
PTBP1-216ENST00000590887 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
PTBP1-216ENST00000590887 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
PTBP1-216ENST00000590887 A0A0D9SG42 100 aa5.89□□□□□ -1.47
PTBP1-216ENST00000590887 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
PTBP1-216ENST00000590887 A8MU10 97 aa5.86□□□□□ -1.47
PTBP1-216ENST00000590887 A6NN06 94 aa5.85□□□□□ -1.47
PTBP1-216ENST00000590887 MT1FP04733 61 aa5.84□□□□□ -1.47
PTBP1-216ENST00000590887 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
PTBP1-216ENST00000590887 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
PTBP1-216ENST00000590887 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
PTBP1-216ENST00000590887 PMAIP1Q13794 54 aa5.77□□□□□ -1.49
PTBP1-216ENST00000590887 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
PTBP1-216ENST00000590887 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
PTBP1-216ENST00000590887 USH2AO75445 5202 aa5.74□□□□□ -1.49
PTBP1-216ENST00000590887 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
PTBP1-216ENST00000590887 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
PTBP1-216ENST00000590887 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
PTBP1-216ENST00000590887 SSPOA2VEC9 5147 aa5.69□□□□□ -1.5
PTBP1-216ENST00000590887 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
PTBP1-216ENST00000590887 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
PTBP1-216ENST00000590887 ROMO1P60602 79 aa5.6□□□□□ -1.51
PTBP1-216ENST00000590887 LCE2BO14633 110 aa5.53□□□□□ -1.52
PTBP1-216ENST00000590887 MT1BP07438 61 aa5.52□□□□□ -1.53
PTBP1-216ENST00000590887 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
PTBP1-216ENST00000590887 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
PTBP1-216ENST00000590887 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
PTBP1-216ENST00000590887 TNP1P09430 55 aa5.43□□□□□ -1.54
PTBP1-216ENST00000590887 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
PTBP1-216ENST00000590887 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
PTBP1-216ENST00000590887 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
PTBP1-216ENST00000590887 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
PTBP1-216ENST00000590887 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
PTBP1-216ENST00000590887 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
PTBP1-216ENST00000590887 MT1XP80297 61 aa5.34□□□□□ -1.55
PTBP1-216ENST00000590887 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
PTBP1-216ENST00000590887 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
PTBP1-216ENST00000590887 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
PTBP1-216ENST00000590887 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
PTBP1-216ENST00000590887 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
PTBP1-216ENST00000590887 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
PTBP1-216ENST00000590887 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
PTBP1-216ENST00000590887 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
PTBP1-216ENST00000590887 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
PTBP1-216ENST00000590887 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
PTBP1-216ENST00000590887 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
PTBP1-216ENST00000590887 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
PTBP1-216ENST00000590887 NEBP20929 6669 aa4.97□□□□□ -1.61
PTBP1-216ENST00000590887 KMT2DO14686 5537 aa4.92□□□□□ -1.62
PTBP1-216ENST00000590887 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
PTBP1-216ENST00000590887 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
PTBP1-216ENST00000590887 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
PTBP1-216ENST00000590887 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
PTBP1-216ENST00000590887 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
PTBP1-216ENST00000590887 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
PTBP1-216ENST00000590887 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
PTBP1-216ENST00000590887 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms