RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
CIRBP-229ENST00000590704 LCE2BO14633 110 aa9.84□□□□□ -0.83
CIRBP-229ENST00000590704 USH2AO75445 5202 aa9.79□□□□□ -0.84
CIRBP-229ENST00000590704 CSAG1Q6PB30 78 aa9.79□□□□□ -0.84
CIRBP-229ENST00000590704 A8MUN3 132 aa9.78□□□□□ -0.84
CIRBP-229ENST00000590704 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
CIRBP-229ENST00000590704 DMAC1Q96GE9 116 aa9.71□□□□□ -0.86
CIRBP-229ENST00000590704 SNURFQ9Y675 71 aa9.68□□□□□ -0.86
CIRBP-229ENST00000590704 SSPOA2VEC9 5147 aa9.63□□□□□ -0.87
CIRBP-229ENST00000590704 KRTAP19-1Q8IUB9 90 aa9.63□□□□□ -0.87
CIRBP-229ENST00000590704 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
CIRBP-229ENST00000590704 NDUFC1O43677 76 aa9.61□□□□□ -0.87
CIRBP-229ENST00000590704 COX7CP15954 63 aa9.59□□□□□ -0.87
CIRBP-229ENST00000590704 ANAPC13Q9BS18 74 aa9.56□□□□□ -0.88
CIRBP-229ENST00000590704 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.54□□□□□ -0.88
CIRBP-229ENST00000590704 H0YAA0 97 aa9.53□□□□□ -0.88
CIRBP-229ENST00000590704 KRTAP9-7A8MTY7 169 aa9.51□□□□□ -0.89
CIRBP-229ENST00000590704 SPRR2GQ9BYE4 73 aa9.5□□□□□ -0.89
CIRBP-229ENST00000590704 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
CIRBP-229ENST00000590704 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
CIRBP-229ENST00000590704 ACYP2P14621 99 aa9.47□□□□□ -0.89
CIRBP-229ENST00000590704 KRTAP19-8Q3LI54 63 aa9.4□□□□□ -0.9
CIRBP-229ENST00000590704 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
CIRBP-229ENST00000590704 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
CIRBP-229ENST00000590704 MT1BP07438 61 aa9.4□□□□□ -0.91
CIRBP-229ENST00000590704 H7BZZ5 65 aa9.36□□□□□ -0.91
CIRBP-229ENST00000590704 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
CIRBP-229ENST00000590704 FCGBPQ9Y6R7 5405 aaPredicted RBP9.36□□□□□ -0.91
CIRBP-229ENST00000590704 CCDC179H3BU77 68 aa9.34□□□□□ -0.91
CIRBP-229ENST00000590704 P0C880 135 aa9.34□□□□□ -0.91
CIRBP-229ENST00000590704 CRIPTQ9P021 101 aa9.34□□□□□ -0.91
CIRBP-229ENST00000590704 Q5VV11 94 aa9.21□□□□□ -0.93
CIRBP-229ENST00000590704 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.94
CIRBP-229ENST00000590704 COA5Q86WW8 74 aa9.19□□□□□ -0.94
CIRBP-229ENST00000590704 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
CIRBP-229ENST00000590704 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
CIRBP-229ENST00000590704 R4GN34 69 aa9.07□□□□□ -0.96
CIRBP-229ENST00000590704 ATP5EP56381 51 aaPredicted RBP9.05□□□□□ -0.96
CIRBP-229ENST00000590704 M0QZ58 72 aa9.03□□□□□ -0.96
CIRBP-229ENST00000590704 KRTAP10-5P60370 271 aa9.03□□□□□ -0.96
CIRBP-229ENST00000590704 SYNE2Q8WXH0 6885 aaKnown RBP9.02□□□□□ -0.97
CIRBP-229ENST00000590704 TMEM258P61165 79 aa9.02□□□□□ -0.97
CIRBP-229ENST00000590704 A6NN06 94 aa8.96□□□□□ -0.98
CIRBP-229ENST00000590704 PCP4P48539 62 aa8.94□□□□□ -0.98
CIRBP-229ENST00000590704 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
CIRBP-229ENST00000590704 MT1XP80297 61 aa8.88□□□□□ -0.99
CIRBP-229ENST00000590704 KRTAP6-3Q3LI67 103 aa8.88□□□□□ -0.99
CIRBP-229ENST00000590704 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
CIRBP-229ENST00000590704 PLAC4Q8WY50 150 aa8.82□□□□□ -1
CIRBP-229ENST00000590704 SEC61GP60059 68 aa8.75□□□□□ -1.01
CIRBP-229ENST00000590704 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
CIRBP-229ENST00000590704 A0A1B0GU33 70 aa8.67□□□□□ -1.02
CIRBP-229ENST00000590704 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
CIRBP-229ENST00000590704 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
CIRBP-229ENST00000590704 A0A1B0GU69 56 aa8.64□□□□□ -1.03
CIRBP-229ENST00000590704 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
CIRBP-229ENST00000590704 KMT2DO14686 5537 aa8.56□□□□□ -1.04
CIRBP-229ENST00000590704 PRR15LQ9BU68 103 aa8.54□□□□□ -1.04
CIRBP-229ENST00000590704 A0A0D9SG42 100 aa8.53□□□□□ -1.04
CIRBP-229ENST00000590704 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
CIRBP-229ENST00000590704 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
CIRBP-229ENST00000590704 KRTAP10-7P60409 375 aaPredicted RBP8.48□□□□□ -1.05
CIRBP-229ENST00000590704 NEBP20929 6669 aa8.45□□□□□ -1.06
CIRBP-229ENST00000590704 A8MU10 97 aa8.44□□□□□ -1.06
CIRBP-229ENST00000590704 KRTAP5-9P26371 169 aa8.43□□□□□ -1.06
CIRBP-229ENST00000590704 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
CIRBP-229ENST00000590704 SMIM26A0A096LP01 95 aa8.42□□□□□ -1.06
CIRBP-229ENST00000590704 KRTAP10-12P60413 245 aa8.42□□□□□ -1.06
CIRBP-229ENST00000590704 V9GYY9 64 aa8.42□□□□□ -1.06
CIRBP-229ENST00000590704 KRTAP4-8A0A0G2JLE6 195 aa8.41□□□□□ -1.06
CIRBP-229ENST00000590704 KRTAP4-8Q9BYQ9 185 aa8.41□□□□□ -1.06
CIRBP-229ENST00000590704 Q1T7F1 81 aa8.38□□□□□ -1.07
CIRBP-229ENST00000590704 MUC12Q9UKN1 5478 aa8.37□□□□□ -1.07
CIRBP-229ENST00000590704 SPINT4Q6UDR6 99 aa8.35□□□□□ -1.07
CIRBP-229ENST00000590704 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
CIRBP-229ENST00000590704 KRTAP20-1Q3LI63 56 aa8.33□□□□□ -1.08
CIRBP-229ENST00000590704 PSPHP1O15172 72 aa8.3□□□□□ -1.08
CIRBP-229ENST00000590704 UQCR11O14957 56 aa8.26□□□□□ -1.09
CIRBP-229ENST00000590704 KRTAP8-1Q8IUC2 63 aa8.24□□□□□ -1.09
CIRBP-229ENST00000590704 SPRR2FQ96RM1 72 aa8.17□□□□□ -1.1
CIRBP-229ENST00000590704 MDN1Q9NU22 5596 aa8.16□□□□□ -1.1
CIRBP-229ENST00000590704 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
CIRBP-229ENST00000590704 C10orf95Q9H7T3 257 aa8.12□□□□□ -1.11
CIRBP-229ENST00000590704 KRTAP2-3P0C7H8 128 aa8.08□□□□□ -1.12
CIRBP-229ENST00000590704 KRTAP2-4Q9BYR9 128 aa8.08□□□□□ -1.12
CIRBP-229ENST00000590704 A6NED7 52 aa8.06□□□□□ -1.12
CIRBP-229ENST00000590704 SPRR2EP22531 72 aa8□□□□□ -1.13
CIRBP-229ENST00000590704 SPRR2BP35325 72 aa8□□□□□ -1.13
CIRBP-229ENST00000590704 SPRR2AP35326 72 aa8□□□□□ -1.13
CIRBP-229ENST00000590704 LCE1AQ5T7P2 110 aa8□□□□□ -1.13
CIRBP-229ENST00000590704 KRTAP19-7Q3SYF9 63 aa7.96□□□□□ -1.13
CIRBP-229ENST00000590704 K7ERS5 55 aa7.88□□□□□ -1.15
CIRBP-229ENST00000590704 TNP1P09430 55 aa7.84□□□□□ -1.15
CIRBP-229ENST00000590704 MT1EP04732 61 aa7.82□□□□□ -1.16
CIRBP-229ENST00000590704 KRTAP2-2Q9BYT5 123 aa7.81□□□□□ -1.16
CIRBP-229ENST00000590704 KRTAP2-1Q9BYU5 128 aa7.81□□□□□ -1.16
CIRBP-229ENST00000590704 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
CIRBP-229ENST00000590704 KRTAP19-5Q3LI72 72 aa7.8□□□□□ -1.16
CIRBP-229ENST00000590704 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
CIRBP-229ENST00000590704 SPRR2DP22532 72 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms