RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 KRTAP3-1Q9BYR8 98 aa8.85□□□□□ -0.99
CXXC1-212ENST00000589940 PSPHP1O15172 72 aa8.85□□□□□ -0.99
CXXC1-212ENST00000589940 RBM12B-AS1Q9P1G2 102 aa8.85□□□□□ -0.99
CXXC1-212ENST00000589940 ACYP2P14621 99 aa8.82□□□□□ -1
CXXC1-212ENST00000589940 COA5Q86WW8 74 aa8.75□□□□□ -1.01
CXXC1-212ENST00000589940 H1FX-AS1Q4G0G2 97 aa8.72□□□□□ -1.01
CXXC1-212ENST00000589940 Q5VV11 94 aa8.72□□□□□ -1.01
CXXC1-212ENST00000589940 KRTAP19-2Q3LHN2 52 aa8.7□□□□□ -1.02
CXXC1-212ENST00000589940 A8MU10 97 aa8.68□□□□□ -1.02
CXXC1-212ENST00000589940 CHKB-CPT1BH3BT56 60 aa8.68□□□□□ -1.02
CXXC1-212ENST00000589940 FLGP20930 4061 aaPredicted RBP8.63□□□□□ -1.03
CXXC1-212ENST00000589940 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
CXXC1-212ENST00000589940 S4R3F8 94 aa8.62□□□□□ -1.03
CXXC1-212ENST00000589940 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
CXXC1-212ENST00000589940 LCA10Q71F78 164 aa8.6□□□□□ -1.03
CXXC1-212ENST00000589940 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
CXXC1-212ENST00000589940 LCE2CQ5TA81 110 aa8.56□□□□□ -1.04
CXXC1-212ENST00000589940 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
CXXC1-212ENST00000589940 FAT4Q6V0I7 4981 aa8.54□□□□□ -1.04
CXXC1-212ENST00000589940 A6NED7 52 aa8.53□□□□□ -1.04
CXXC1-212ENST00000589940 A6NN06 94 aa8.5□□□□□ -1.05
CXXC1-212ENST00000589940 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
CXXC1-212ENST00000589940 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
CXXC1-212ENST00000589940 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
CXXC1-212ENST00000589940 MT1HP80294 61 aa8.39□□□□□ -1.07
CXXC1-212ENST00000589940 M0R2T5 61 aa8.31□□□□□ -1.08
CXXC1-212ENST00000589940 A0A1B0GU69 56 aa8.28□□□□□ -1.08
CXXC1-212ENST00000589940 H0YAA0 97 aa8.25□□□□□ -1.09
CXXC1-212ENST00000589940 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
CXXC1-212ENST00000589940 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.09
CXXC1-212ENST00000589940 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
CXXC1-212ENST00000589940 LCE2AQ5TA79 106 aaPredicted RBP8.17□□□□□ -1.1
CXXC1-212ENST00000589940 P0C880 135 aa8.15□□□□□ -1.1
CXXC1-212ENST00000589940 PRAC1Q96KF2 57 aa8.13□□□□□ -1.11
CXXC1-212ENST00000589940 A0A1B0GU33 70 aa8.07□□□□□ -1.12
CXXC1-212ENST00000589940 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
CXXC1-212ENST00000589940 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
CXXC1-212ENST00000589940 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
CXXC1-212ENST00000589940 MT2AP02795 61 aa8.03□□□□□ -1.12
CXXC1-212ENST00000589940 UQCR11O14957 56 aa8.01□□□□□ -1.13
CXXC1-212ENST00000589940 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
CXXC1-212ENST00000589940 MT1FP04733 61 aa7.98□□□□□ -1.13
CXXC1-212ENST00000589940 KRTAP10-10P60014 251 aa7.97□□□□□ -1.13
CXXC1-212ENST00000589940 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
CXXC1-212ENST00000589940 M0QZ58 72 aa7.95□□□□□ -1.14
CXXC1-212ENST00000589940 R4GN34 69 aa7.95□□□□□ -1.14
CXXC1-212ENST00000589940 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
CXXC1-212ENST00000589940 MIR22HGQ0VDD5 57 aa7.94□□□□□ -1.14
CXXC1-212ENST00000589940 H3BS24 57 aa7.9□□□□□ -1.15
CXXC1-212ENST00000589940 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
CXXC1-212ENST00000589940 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
CXXC1-212ENST00000589940 A0A0D9SG42 100 aa7.78□□□□□ -1.16
CXXC1-212ENST00000589940 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
CXXC1-212ENST00000589940 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
CXXC1-212ENST00000589940 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
CXXC1-212ENST00000589940 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
CXXC1-212ENST00000589940 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
CXXC1-212ENST00000589940 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
CXXC1-212ENST00000589940 LCE2BO14633 110 aa7.58□□□□□ -1.2
CXXC1-212ENST00000589940 K7ERS5 55 aa7.58□□□□□ -1.2
CXXC1-212ENST00000589940 ROMO1P60602 79 aa7.54□□□□□ -1.2
CXXC1-212ENST00000589940 MT1BP07438 61 aa7.52□□□□□ -1.2
CXXC1-212ENST00000589940 PLAC4Q8WY50 150 aa7.52□□□□□ -1.2
CXXC1-212ENST00000589940 USH2AO75445 5202 aa7.51□□□□□ -1.21
CXXC1-212ENST00000589940 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
CXXC1-212ENST00000589940 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
CXXC1-212ENST00000589940 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
CXXC1-212ENST00000589940 FSIP2Q5CZC0 6907 aa7.27□□□□□ -1.24
CXXC1-212ENST00000589940 MT1XP80297 61 aa7.26□□□□□ -1.25
CXXC1-212ENST00000589940 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
CXXC1-212ENST00000589940 KRTAP10-5P60370 271 aa7.24□□□□□ -1.25
CXXC1-212ENST00000589940 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
CXXC1-212ENST00000589940 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.26
CXXC1-212ENST00000589940 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
CXXC1-212ENST00000589940 TNP1P09430 55 aa7.04□□□□□ -1.28
CXXC1-212ENST00000589940 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
CXXC1-212ENST00000589940 NDUFAF8A1L188 74 aa7.01□□□□□ -1.29
CXXC1-212ENST00000589940 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
CXXC1-212ENST00000589940 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
CXXC1-212ENST00000589940 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
CXXC1-212ENST00000589940 KRTAP10-12P60413 245 aa6.88□□□□□ -1.31
CXXC1-212ENST00000589940 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
CXXC1-212ENST00000589940 KMT2DO14686 5537 aa6.78□□□□□ -1.32
CXXC1-212ENST00000589940 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
CXXC1-212ENST00000589940 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
CXXC1-212ENST00000589940 KRTAP9-6A0A140TA67 174 aa6.73□□□□□ -1.33
CXXC1-212ENST00000589940 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
CXXC1-212ENST00000589940 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
CXXC1-212ENST00000589940 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
CXXC1-212ENST00000589940 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
CXXC1-212ENST00000589940 A0A0A0MQY5 61 aa6.59□□□□□ -1.35
CXXC1-212ENST00000589940 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
CXXC1-212ENST00000589940 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
CXXC1-212ENST00000589940 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
CXXC1-212ENST00000589940 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
CXXC1-212ENST00000589940 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
CXXC1-212ENST00000589940 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
CXXC1-212ENST00000589940 MT1EP04732 61 aa6.37□□□□□ -1.39
CXXC1-212ENST00000589940 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
CXXC1-212ENST00000589940 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms