RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 C20orf197Q8N268 126 aa5.86□□□□□ -1.47
VAT1-206ENST00000589709 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
VAT1-206ENST00000589709 LOC101927531A0A1B0GV80 90 aa5.82□□□□□ -1.48
VAT1-206ENST00000589709 H1FX-AS1Q4G0G2 97 aa5.81□□□□□ -1.48
VAT1-206ENST00000589709 LINC00208Q96KT6 92 aa5.81□□□□□ -1.48
VAT1-206ENST00000589709 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
VAT1-206ENST00000589709 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
VAT1-206ENST00000589709 TMEM258P61165 79 aa5.77□□□□□ -1.49
VAT1-206ENST00000589709 Q5W150 140 aa5.77□□□□□ -1.49
VAT1-206ENST00000589709 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
VAT1-206ENST00000589709 ATP5EP56381 51 aaPredicted RBP5.75□□□□□ -1.49
VAT1-206ENST00000589709 H7BZZ5 65 aa5.74□□□□□ -1.49
VAT1-206ENST00000589709 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
VAT1-206ENST00000589709 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
VAT1-206ENST00000589709 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
VAT1-206ENST00000589709 SPANXA2-OT1Q8N9U9 137 aa5.72□□□□□ -1.49
VAT1-206ENST00000589709 CYP4F30PQ9H0H9 118 aa5.72□□□□□ -1.49
VAT1-206ENST00000589709 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
VAT1-206ENST00000589709 CYSTM1Q9H1C7 97 aa5.69□□□□□ -1.5
VAT1-206ENST00000589709 C4orf26Q17RF5 130 aa5.65□□□□□ -1.5
VAT1-206ENST00000589709 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
VAT1-206ENST00000589709 A8MUN3 132 aa5.59□□□□□ -1.51
VAT1-206ENST00000589709 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
VAT1-206ENST00000589709 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
VAT1-206ENST00000589709 ACYP2P14621 99 aa5.56□□□□□ -1.52
VAT1-206ENST00000589709 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
VAT1-206ENST00000589709 CSAG1Q6PB30 78 aa5.56□□□□□ -1.52
VAT1-206ENST00000589709 DMAC1Q96GE9 116 aa5.56□□□□□ -1.52
VAT1-206ENST00000589709 S4R3F8 94 aa5.55□□□□□ -1.52
VAT1-206ENST00000589709 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
VAT1-206ENST00000589709 MT1BP07438 61 aa5.51□□□□□ -1.53
VAT1-206ENST00000589709 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
VAT1-206ENST00000589709 LCA10Q71F78 164 aa5.51□□□□□ -1.53
VAT1-206ENST00000589709 Q5VV11 94 aa5.5□□□□□ -1.53
VAT1-206ENST00000589709 A6NN06 94 aa5.49□□□□□ -1.53
VAT1-206ENST00000589709 COA5Q86WW8 74 aa5.48□□□□□ -1.53
VAT1-206ENST00000589709 CHKB-CPT1BH3BT56 60 aa5.46□□□□□ -1.54
VAT1-206ENST00000589709 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
VAT1-206ENST00000589709 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
VAT1-206ENST00000589709 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
VAT1-206ENST00000589709 NEBP20929 6669 aa5.43□□□□□ -1.54
VAT1-206ENST00000589709 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
VAT1-206ENST00000589709 CRIPTQ9P021 101 aa5.4□□□□□ -1.54
VAT1-206ENST00000589709 V9GYY9 64 aa5.39□□□□□ -1.55
VAT1-206ENST00000589709 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
VAT1-206ENST00000589709 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
VAT1-206ENST00000589709 Q1T7F1 81 aa5.32□□□□□ -1.56
VAT1-206ENST00000589709 H0YAA0 97 aa5.31□□□□□ -1.56
VAT1-206ENST00000589709 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
VAT1-206ENST00000589709 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
VAT1-206ENST00000589709 KMT2DO14686 5537 aa5.27□□□□□ -1.57
VAT1-206ENST00000589709 SEC61GP60059 68 aa5.25□□□□□ -1.57
VAT1-206ENST00000589709 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
VAT1-206ENST00000589709 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
VAT1-206ENST00000589709 A0A1B0GU69 56 aa5.21□□□□□ -1.58
VAT1-206ENST00000589709 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
VAT1-206ENST00000589709 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
VAT1-206ENST00000589709 PSPHP1O15172 72 aa5.15□□□□□ -1.59
VAT1-206ENST00000589709 MT1XP80297 61 aa5.14□□□□□ -1.59
VAT1-206ENST00000589709 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
VAT1-206ENST00000589709 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
VAT1-206ENST00000589709 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
VAT1-206ENST00000589709 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
VAT1-206ENST00000589709 R4GN34 69 aa5.08□□□□□ -1.6
VAT1-206ENST00000589709 UQCR11O14957 56 aa5.07□□□□□ -1.6
VAT1-206ENST00000589709 P0C880 135 aa5.07□□□□□ -1.6
VAT1-206ENST00000589709 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
VAT1-206ENST00000589709 A6NED7 52 aa5.06□□□□□ -1.6
VAT1-206ENST00000589709 A0A1B0GU33 70 aa5.05□□□□□ -1.6
VAT1-206ENST00000589709 SPRR2EP22531 72 aa5.04□□□□□ -1.6
VAT1-206ENST00000589709 SPRR2BP35325 72 aa5.04□□□□□ -1.6
VAT1-206ENST00000589709 SPRR2AP35326 72 aa5.04□□□□□ -1.6
VAT1-206ENST00000589709 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
VAT1-206ENST00000589709 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
VAT1-206ENST00000589709 M0QZ58 72 aa5.03□□□□□ -1.6
VAT1-206ENST00000589709 MIR22HGQ0VDD5 57 aa4.98□□□□□ -1.61
VAT1-206ENST00000589709 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
VAT1-206ENST00000589709 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
VAT1-206ENST00000589709 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
VAT1-206ENST00000589709 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
VAT1-206ENST00000589709 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
VAT1-206ENST00000589709 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
VAT1-206ENST00000589709 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
VAT1-206ENST00000589709 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
VAT1-206ENST00000589709 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
VAT1-206ENST00000589709 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
VAT1-206ENST00000589709 SPRR2DP22532 72 aa4.88□□□□□ -1.63
VAT1-206ENST00000589709 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
VAT1-206ENST00000589709 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
VAT1-206ENST00000589709 K7ERS5 55 aa4.86□□□□□ -1.63
VAT1-206ENST00000589709 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
VAT1-206ENST00000589709 A0A0D9SG42 100 aa4.79□□□□□ -1.64
VAT1-206ENST00000589709 A8MU10 97 aa4.79□□□□□ -1.64
VAT1-206ENST00000589709 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
VAT1-206ENST00000589709 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
VAT1-206ENST00000589709 SPINT4Q6UDR6 99 aa4.71□□□□□ -1.66
VAT1-206ENST00000589709 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
VAT1-206ENST00000589709 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
VAT1-206ENST00000589709 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
VAT1-206ENST00000589709 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms