RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 MT1HP80294 61 aa8.65□□□□□ -1.02
TMED1-205ENST00000589638 LCA10Q71F78 164 aa8.64□□□□□ -1.03
TMED1-205ENST00000589638 CHKB-CPT1BH3BT56 60 aa8.61□□□□□ -1.03
TMED1-205ENST00000589638 COA5Q86WW8 74 aa8.61□□□□□ -1.03
TMED1-205ENST00000589638 M0R2T5 61 aa8.6□□□□□ -1.03
TMED1-205ENST00000589638 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
TMED1-205ENST00000589638 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
TMED1-205ENST00000589638 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
TMED1-205ENST00000589638 SPTSSBQ8NFR3 76 aa8.46□□□□□ -1.06
TMED1-205ENST00000589638 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
TMED1-205ENST00000589638 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
TMED1-205ENST00000589638 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
TMED1-205ENST00000589638 ADM2Q7Z4H4 148 aa8.28□□□□□ -1.08
TMED1-205ENST00000589638 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
TMED1-205ENST00000589638 MT2AP02795 61 aa8.25□□□□□ -1.09
TMED1-205ENST00000589638 RPS28P62857 69 aaKnown RBP8.25□□□□□ -1.09
TMED1-205ENST00000589638 H0YAA0 97 aa8.24□□□□□ -1.09
TMED1-205ENST00000589638 MT1FP04733 61 aa8.2□□□□□ -1.1
TMED1-205ENST00000589638 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
TMED1-205ENST00000589638 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
TMED1-205ENST00000589638 SMIM26A0A096LP01 95 aa8.18□□□□□ -1.1
TMED1-205ENST00000589638 SEC61GP60059 68 aa8.18□□□□□ -1.1
TMED1-205ENST00000589638 P0C880 135 aa8.17□□□□□ -1.1
TMED1-205ENST00000589638 LINC01558Q9Y6Z2 57 aa8.15□□□□□ -1.1
TMED1-205ENST00000589638 A0A1B0GU69 56 aa8.14□□□□□ -1.11
TMED1-205ENST00000589638 V9GYY9 64 aa8.08□□□□□ -1.12
TMED1-205ENST00000589638 Q1T7F1 81 aa8.07□□□□□ -1.12
TMED1-205ENST00000589638 PRR15LQ9BU68 103 aa8.07□□□□□ -1.12
TMED1-205ENST00000589638 PSPHP1O15172 72 aa8□□□□□ -1.13
TMED1-205ENST00000589638 CRIPTQ9P021 101 aa8□□□□□ -1.13
TMED1-205ENST00000589638 KRTAP9-3Q9BYQ3 159 aa7.99□□□□□ -1.13
TMED1-205ENST00000589638 A0A1B0GU33 70 aa7.98□□□□□ -1.13
TMED1-205ENST00000589638 M0QZ58 72 aa7.98□□□□□ -1.13
TMED1-205ENST00000589638 R4GN34 69 aa7.98□□□□□ -1.13
TMED1-205ENST00000589638 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
TMED1-205ENST00000589638 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
TMED1-205ENST00000589638 Q5VV11 94 aa7.91□□□□□ -1.14
TMED1-205ENST00000589638 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
TMED1-205ENST00000589638 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
TMED1-205ENST00000589638 LINC01554Q52M75 96 aa7.87□□□□□ -1.15
TMED1-205ENST00000589638 LCE2BO14633 110 aa7.82□□□□□ -1.16
TMED1-205ENST00000589638 UQCR11O14957 56 aa7.82□□□□□ -1.16
TMED1-205ENST00000589638 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
TMED1-205ENST00000589638 A0A0D9SG42 100 aa7.79□□□□□ -1.16
TMED1-205ENST00000589638 USH2AO75445 5202 aa7.77□□□□□ -1.17
TMED1-205ENST00000589638 A6NED7 52 aa7.76□□□□□ -1.17
TMED1-205ENST00000589638 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
TMED1-205ENST00000589638 A8MU10 97 aa7.74□□□□□ -1.17
TMED1-205ENST00000589638 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
TMED1-205ENST00000589638 KRTAP9-2Q9BYQ4 174 aa7.7□□□□□ -1.18
TMED1-205ENST00000589638 MT1BP07438 61 aa7.69□□□□□ -1.18
TMED1-205ENST00000589638 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
TMED1-205ENST00000589638 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
TMED1-205ENST00000589638 A6NN06 94 aa7.61□□□□□ -1.19
TMED1-205ENST00000589638 KRTAP12-1P59990 96 aa7.58□□□□□ -1.2
TMED1-205ENST00000589638 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
TMED1-205ENST00000589638 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
TMED1-205ENST00000589638 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
TMED1-205ENST00000589638 FSIP2Q5CZC0 6907 aa7.53□□□□□ -1.2
TMED1-205ENST00000589638 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
TMED1-205ENST00000589638 BRK1Q8WUW1 75 aa7.46□□□□□ -1.22
TMED1-205ENST00000589638 K7ERS5 55 aa7.44□□□□□ -1.22
TMED1-205ENST00000589638 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
TMED1-205ENST00000589638 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
TMED1-205ENST00000589638 MT1XP80297 61 aa7.37□□□□□ -1.23
TMED1-205ENST00000589638 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
TMED1-205ENST00000589638 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
TMED1-205ENST00000589638 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
TMED1-205ENST00000589638 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
TMED1-205ENST00000589638 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
TMED1-205ENST00000589638 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
TMED1-205ENST00000589638 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
TMED1-205ENST00000589638 ROMO1P60602 79 aa7.08□□□□□ -1.28
TMED1-205ENST00000589638 TNP1P09430 55 aa7.03□□□□□ -1.28
TMED1-205ENST00000589638 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
TMED1-205ENST00000589638 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
TMED1-205ENST00000589638 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
TMED1-205ENST00000589638 KMT2DO14686 5537 aa6.91□□□□□ -1.3
TMED1-205ENST00000589638 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
TMED1-205ENST00000589638 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
TMED1-205ENST00000589638 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
TMED1-205ENST00000589638 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
TMED1-205ENST00000589638 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
TMED1-205ENST00000589638 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
TMED1-205ENST00000589638 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
TMED1-205ENST00000589638 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
TMED1-205ENST00000589638 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
TMED1-205ENST00000589638 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
TMED1-205ENST00000589638 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
TMED1-205ENST00000589638 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
TMED1-205ENST00000589638 KRTAP6-3Q3LI67 103 aa6.59□□□□□ -1.35
TMED1-205ENST00000589638 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.35
TMED1-205ENST00000589638 KRTAP19-7Q3SYF9 63 aa6.57□□□□□ -1.36
TMED1-205ENST00000589638 KRTAP9-7A8MTY7 169 aa6.56□□□□□ -1.36
TMED1-205ENST00000589638 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
TMED1-205ENST00000589638 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
TMED1-205ENST00000589638 MT1EP04732 61 aa6.49□□□□□ -1.37
TMED1-205ENST00000589638 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
TMED1-205ENST00000589638 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
TMED1-205ENST00000589638 SPRR2EP22531 72 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms