RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 C20orf166-AS1Q96NR2 134 aa13.36□□□□□ -0.27
RFX1-205ENST00000589239 SPINK7P58062 85 aa13.35□□□□□ -0.27
RFX1-205ENST00000589239 A8MUU9 505 aa13.34□□□□□ -0.27
RFX1-205ENST00000589239 RPL37P61927 97 aaKnown RBP13.28□□□□□ -0.28
RFX1-205ENST00000589239 Q5W150 140 aa13.16□□□□□ -0.3
RFX1-205ENST00000589239 ACYP2P14621 99 aa13.11□□□□□ -0.31
RFX1-205ENST00000589239 SEC61BP60468 96 aaKnown RBP13.07□□□□□ -0.32
RFX1-205ENST00000589239 MUC17Q685J3 4493 aa13.07□□□□□ -0.32
RFX1-205ENST00000589239 UBR4Q5T4S7 5183 aa13.05□□□□□ -0.32
RFX1-205ENST00000589239 DMAC1Q96GE9 116 aa13□□□□□ -0.33
RFX1-205ENST00000589239 MUC2Q02817 5179 aa12.94□□□□□ -0.34
RFX1-205ENST00000589239 PRAC1Q96KF2 57 aa12.93□□□□□ -0.34
RFX1-205ENST00000589239 A0A1B0GU69 56 aa12.92□□□□□ -0.34
RFX1-205ENST00000589239 SPATA8Q6RVD6 105 aa12.92□□□□□ -0.34
RFX1-205ENST00000589239 IGKV2D-30A0A075B6S6 120 aa12.92□□□□□ -0.34
RFX1-205ENST00000589239 IGKV2-30P06310 120 aa12.92□□□□□ -0.34
RFX1-205ENST00000589239 KRTAP4-1Q9BYQ7 146 aa12.88□□□□□ -0.35
RFX1-205ENST00000589239 ADM2Q7Z4H4 148 aa12.84□□□□□ -0.35
RFX1-205ENST00000589239 RNF213Q63HN8 5207 aa12.82□□□□□ -0.36
RFX1-205ENST00000589239 UQCR11O14957 56 aa12.79□□□□□ -0.36
RFX1-205ENST00000589239 MIR22HGQ0VDD5 57 aa12.79□□□□□ -0.36
RFX1-205ENST00000589239 LINC01554Q52M75 96 aa12.79□□□□□ -0.36
RFX1-205ENST00000589239 CSAG1Q6PB30 78 aa12.52□□□□□ -0.41
RFX1-205ENST00000589239 COX6B2Q6YFQ2 88 aa12.47□□□□□ -0.41
RFX1-205ENST00000589239 KRTAP19-2Q3LHN2 52 aa12.44□□□□□ -0.42
RFX1-205ENST00000589239 KRTAP3-1Q9BYR8 98 aa12.44□□□□□ -0.42
RFX1-205ENST00000589239 FAT4Q6V0I7 4981 aa12.38□□□□□ -0.43
RFX1-205ENST00000589239 H3BS24 57 aa12.32□□□□□ -0.44
RFX1-205ENST00000589239 LCE2CQ5TA81 110 aa12.31□□□□□ -0.44
RFX1-205ENST00000589239 H1FX-AS1Q4G0G2 97 aa12.28□□□□□ -0.44
RFX1-205ENST00000589239 FLGP20930 4061 aaPredicted RBP12.25□□□□□ -0.45
RFX1-205ENST00000589239 H0YAA0 97 aa12.21□□□□□ -0.45
RFX1-205ENST00000589239 KRTAP25-1Q3LHN0 102 aa12.16□□□□□ -0.46
RFX1-205ENST00000589239 S4R3F8 94 aa12.12□□□□□ -0.47
RFX1-205ENST00000589239 MT1HP80294 61 aa12.1□□□□□ -0.47
RFX1-205ENST00000589239 A0A1B0GU33 70 aa12.07□□□□□ -0.48
RFX1-205ENST00000589239 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
RFX1-205ENST00000589239 ROMO1P60602 79 aa11.99□□□□□ -0.49
RFX1-205ENST00000589239 M0R2T5 61 aa11.96□□□□□ -0.49
RFX1-205ENST00000589239 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
RFX1-205ENST00000589239 K7ERS5 55 aa11.87□□□□□ -0.51
RFX1-205ENST00000589239 KRTAP10-6P60371 365 aaPredicted RBP11.7□□□□□ -0.54
RFX1-205ENST00000589239 CRIPTQ9P021 101 aa11.68□□□□□ -0.54
RFX1-205ENST00000589239 LORP23490 312 aaPredicted RBP11.65□□□□□ -0.54
RFX1-205ENST00000589239 P0C880 135 aa11.61□□□□□ -0.55
RFX1-205ENST00000589239 KRTAP9-8Q9BYQ0 159 aa11.59□□□□□ -0.55
RFX1-205ENST00000589239 MT2AP02795 61 aa11.52□□□□□ -0.57
RFX1-205ENST00000589239 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
RFX1-205ENST00000589239 MT1FP04733 61 aa11.46□□□□□ -0.57
RFX1-205ENST00000589239 KRTAP10-10P60014 251 aa11.42□□□□□ -0.58
RFX1-205ENST00000589239 KRTAP13-4Q3LI77 160 aa11.41□□□□□ -0.58
RFX1-205ENST00000589239 SPINT4Q6UDR6 99 aa11.39□□□□□ -0.59
RFX1-205ENST00000589239 A0A0D9SG42 100 aa11.35□□□□□ -0.59
RFX1-205ENST00000589239 KRTAP15-1Q3LI76 137 aa11.23□□□□□ -0.61
RFX1-205ENST00000589239 C10orf95Q9H7T3 257 aa11.23□□□□□ -0.61
RFX1-205ENST00000589239 KRTAP9-3Q9BYQ3 159 aa11.19□□□□□ -0.62
RFX1-205ENST00000589239 R4GN34 69 aa11.17□□□□□ -0.62
RFX1-205ENST00000589239 M0QZ58 72 aa11.13□□□□□ -0.63
RFX1-205ENST00000589239 KRTAP19-1Q8IUB9 90 aa11.11□□□□□ -0.63
RFX1-205ENST00000589239 KRTAP12-2P59991 146 aa11.1□□□□□ -0.63
RFX1-205ENST00000589239 NDUFAF8A1L188 74 aa11.09□□□□□ -0.63
RFX1-205ENST00000589239 SPRR2GQ9BYE4 73 aa11.08□□□□□ -0.64
RFX1-205ENST00000589239 KRTAP12-1P59990 96 aa11.01□□□□□ -0.65
RFX1-205ENST00000589239 LCE2BO14633 110 aa10.96□□□□□ -0.66
RFX1-205ENST00000589239 LCE2DQ5TA82 110 aaPredicted RBP10.91□□□□□ -0.66
RFX1-205ENST00000589239 USH2AO75445 5202 aa10.85□□□□□ -0.67
RFX1-205ENST00000589239 KRTAP19-8Q3LI54 63 aa10.83□□□□□ -0.68
RFX1-205ENST00000589239 MT1BP07438 61 aa10.75□□□□□ -0.69
RFX1-205ENST00000589239 KRTAP9-2Q9BYQ4 174 aa10.75□□□□□ -0.69
RFX1-205ENST00000589239 FSIP2Q5CZC0 6907 aa10.73□□□□□ -0.69
RFX1-205ENST00000589239 PLAC4Q8WY50 150 aa10.63□□□□□ -0.71
RFX1-205ENST00000589239 SSPOA2VEC9 5147 aa10.56□□□□□ -0.72
RFX1-205ENST00000589239 CAMK2N1Q7Z7J9 78 aa10.41□□□□□ -0.74
RFX1-205ENST00000589239 KRTAP19-6Q3LI70 58 aa10.34□□□□□ -0.75
RFX1-205ENST00000589239 MT1XP80297 61 aa10.33□□□□□ -0.76
RFX1-205ENST00000589239 KRTAP10-5P60370 271 aa10.3□□□□□ -0.76
RFX1-205ENST00000589239 CRCT1Q9UGL9 99 aa10.29□□□□□ -0.76
RFX1-205ENST00000589239 PRO2289Q9P1D8 64 aa10.22□□□□□ -0.77
RFX1-205ENST00000589239 PP632Q6XCG6 107 aa10.2□□□□□ -0.78
RFX1-205ENST00000589239 LUZP6Q538Z0 58 aa10.19□□□□□ -0.78
RFX1-205ENST00000589239 FCGBPQ9Y6R7 5405 aaPredicted RBP10.17□□□□□ -0.78
RFX1-205ENST00000589239 A0A0A0MQY5 61 aa10.13□□□□□ -0.79
RFX1-205ENST00000589239 KRTAP9-6A0A140TA67 174 aa10.03□□□□□ -0.8
RFX1-205ENST00000589239 KRTAP10-7P60409 375 aaPredicted RBP9.91□□□□□ -0.82
RFX1-205ENST00000589239 TNP1P09430 55 aa9.82□□□□□ -0.84
RFX1-205ENST00000589239 KMT2DO14686 5537 aa9.8□□□□□ -0.84
RFX1-205ENST00000589239 KRTAP10-12P60413 245 aa9.77□□□□□ -0.84
RFX1-205ENST00000589239 KRTAP23-1A1A580 65 aa9.76□□□□□ -0.85
RFX1-205ENST00000589239 MACF1Q9UPN3 7388 aaKnown RBP9.74□□□□□ -0.85
RFX1-205ENST00000589239 SPRR5A0A1B0GTR4 108 aa9.71□□□□□ -0.85
RFX1-205ENST00000589239 KRTAP4-8A0A0G2JLE6 195 aa9.64□□□□□ -0.87
RFX1-205ENST00000589239 KRTAP4-8Q9BYQ9 185 aa9.64□□□□□ -0.87
RFX1-205ENST00000589239 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.54□□□□□ -0.88
RFX1-205ENST00000589239 SYNE2Q8WXH0 6885 aaKnown RBP9.54□□□□□ -0.88
RFX1-205ENST00000589239 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
RFX1-205ENST00000589239 KRTAP8-1Q8IUC2 63 aa9.43□□□□□ -0.9
RFX1-205ENST00000589239 KRTAP19-5Q3LI72 72 aa9.25□□□□□ -0.93
RFX1-205ENST00000589239 KRTAP19-7Q3SYF9 63 aa9.22□□□□□ -0.93
RFX1-205ENST00000589239 SPRR2FQ96RM1 72 aa9.19□□□□□ -0.94
RFX1-205ENST00000589239 KRTAP5-9P26371 169 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 880.7 ms