RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SEC61GP60059 68 aa8□□□□□ -1.13
MBD1-217ENST00000588937 J3QL48 77 aa7.99□□□□□ -1.13
MBD1-217ENST00000588937 UQCR11O14957 56 aa7.96□□□□□ -1.14
MBD1-217ENST00000588937 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
MBD1-217ENST00000588937 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
MBD1-217ENST00000588937 SPATA8Q6RVD6 105 aa7.91□□□□□ -1.14
MBD1-217ENST00000588937 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
MBD1-217ENST00000588937 HERC1Q15751 4861 aa7.86□□□□□ -1.15
MBD1-217ENST00000588937 A6NN06 94 aa7.82□□□□□ -1.16
MBD1-217ENST00000588937 S4R3F8 94 aa7.77□□□□□ -1.17
MBD1-217ENST00000588937 A0A1B0GU33 70 aa7.76□□□□□ -1.17
MBD1-217ENST00000588937 H1FX-AS1Q4G0G2 97 aa7.74□□□□□ -1.17
MBD1-217ENST00000588937 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
MBD1-217ENST00000588937 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
MBD1-217ENST00000588937 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
MBD1-217ENST00000588937 LPAP08519 4548 aa7.7□□□□□ -1.18
MBD1-217ENST00000588937 LRP2P98164 4655 aa7.69□□□□□ -1.18
MBD1-217ENST00000588937 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
MBD1-217ENST00000588937 H0YAA0 97 aa7.66□□□□□ -1.18
MBD1-217ENST00000588937 HMCN2Q8NDA2 5059 aa7.66□□□□□ -1.18
MBD1-217ENST00000588937 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.2
MBD1-217ENST00000588937 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
MBD1-217ENST00000588937 CSAG1Q6PB30 78 aa7.56□□□□□ -1.2
MBD1-217ENST00000588937 KRTAP3-2Q9BYR7 98 aa7.54□□□□□ -1.2
MBD1-217ENST00000588937 K7ERS5 55 aa7.51□□□□□ -1.21
MBD1-217ENST00000588937 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
MBD1-217ENST00000588937 P0C880 135 aa7.46□□□□□ -1.22
MBD1-217ENST00000588937 KRTAP13-4Q3LI77 160 aa7.41□□□□□ -1.22
MBD1-217ENST00000588937 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
MBD1-217ENST00000588937 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
MBD1-217ENST00000588937 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
MBD1-217ENST00000588937 A0A0D9SG42 100 aa7.35□□□□□ -1.23
MBD1-217ENST00000588937 M0QZ58 72 aa7.35□□□□□ -1.23
MBD1-217ENST00000588937 KRTAP19-2Q3LHN2 52 aa7.26□□□□□ -1.25
MBD1-217ENST00000588937 ROMO1P60602 79 aa7.23□□□□□ -1.25
MBD1-217ENST00000588937 RNF213Q63HN8 5207 aa7.21□□□□□ -1.25
MBD1-217ENST00000588937 MUC2Q02817 5179 aa7.21□□□□□ -1.25
MBD1-217ENST00000588937 R4GN34 69 aa7.19□□□□□ -1.26
MBD1-217ENST00000588937 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
MBD1-217ENST00000588937 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
MBD1-217ENST00000588937 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
MBD1-217ENST00000588937 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
MBD1-217ENST00000588937 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
MBD1-217ENST00000588937 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
MBD1-217ENST00000588937 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
MBD1-217ENST00000588937 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
MBD1-217ENST00000588937 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
MBD1-217ENST00000588937 FAT4Q6V0I7 4981 aa6.95□□□□□ -1.3
MBD1-217ENST00000588937 MT1HP80294 61 aa6.87□□□□□ -1.31
MBD1-217ENST00000588937 M0R2T5 61 aa6.82□□□□□ -1.32
MBD1-217ENST00000588937 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
MBD1-217ENST00000588937 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
MBD1-217ENST00000588937 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
MBD1-217ENST00000588937 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
MBD1-217ENST00000588937 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
MBD1-217ENST00000588937 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
MBD1-217ENST00000588937 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
MBD1-217ENST00000588937 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
MBD1-217ENST00000588937 MT2AP02795 61 aa6.61□□□□□ -1.35
MBD1-217ENST00000588937 MT1FP04733 61 aa6.58□□□□□ -1.36
MBD1-217ENST00000588937 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
MBD1-217ENST00000588937 TNP1P09430 55 aa6.53□□□□□ -1.36
MBD1-217ENST00000588937 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
MBD1-217ENST00000588937 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
MBD1-217ENST00000588937 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
MBD1-217ENST00000588937 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
MBD1-217ENST00000588937 MT1BP07438 61 aa6.32□□□□□ -1.4
MBD1-217ENST00000588937 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
MBD1-217ENST00000588937 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
MBD1-217ENST00000588937 LCE2BO14633 110 aa6.21□□□□□ -1.42
MBD1-217ENST00000588937 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
MBD1-217ENST00000588937 MT1XP80297 61 aa6.21□□□□□ -1.42
MBD1-217ENST00000588937 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
MBD1-217ENST00000588937 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
MBD1-217ENST00000588937 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
MBD1-217ENST00000588937 NDUFAF8A1L188 74 aa6.08□□□□□ -1.44
MBD1-217ENST00000588937 USH2AO75445 5202 aa6.07□□□□□ -1.44
MBD1-217ENST00000588937 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
MBD1-217ENST00000588937 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
MBD1-217ENST00000588937 LUZP6Q538Z0 58 aa6□□□□□ -1.45
MBD1-217ENST00000588937 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
MBD1-217ENST00000588937 H3BS24 57 aa5.99□□□□□ -1.45
MBD1-217ENST00000588937 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
MBD1-217ENST00000588937 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
MBD1-217ENST00000588937 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
MBD1-217ENST00000588937 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
MBD1-217ENST00000588937 KRTAP12-3P60328 96 aa5.9□□□□□ -1.47
MBD1-217ENST00000588937 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
MBD1-217ENST00000588937 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
MBD1-217ENST00000588937 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
MBD1-217ENST00000588937 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
MBD1-217ENST00000588937 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
MBD1-217ENST00000588937 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
MBD1-217ENST00000588937 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.54□□□□□ -1.52
MBD1-217ENST00000588937 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
MBD1-217ENST00000588937 KMT2DO14686 5537 aa5.53□□□□□ -1.52
MBD1-217ENST00000588937 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
MBD1-217ENST00000588937 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
MBD1-217ENST00000588937 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
MBD1-217ENST00000588937 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms