RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 ANAPC13Q9BS18 74 aa6.91□□□□□ -1.3
CNN1-208ENST00000588935 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
CNN1-208ENST00000588935 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
CNN1-208ENST00000588935 DMAC1Q96GE9 116 aa6.89□□□□□ -1.31
CNN1-208ENST00000588935 NDUFC1O43677 76 aa6.88□□□□□ -1.31
CNN1-208ENST00000588935 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
CNN1-208ENST00000588935 ACYP2P14621 99 aa6.84□□□□□ -1.31
CNN1-208ENST00000588935 CYSTM1Q9H1C7 97 aa6.8□□□□□ -1.32
CNN1-208ENST00000588935 SPANXA2-OT1Q8N9U9 137 aa6.79□□□□□ -1.32
CNN1-208ENST00000588935 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
CNN1-208ENST00000588935 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
CNN1-208ENST00000588935 CHKB-CPT1BH3BT56 60 aa6.75□□□□□ -1.33
CNN1-208ENST00000588935 H7BZZ5 65 aa6.74□□□□□ -1.33
CNN1-208ENST00000588935 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
CNN1-208ENST00000588935 LCE2BO14633 110 aa6.68□□□□□ -1.34
CNN1-208ENST00000588935 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
CNN1-208ENST00000588935 COA5Q86WW8 74 aa6.65□□□□□ -1.34
CNN1-208ENST00000588935 H0YAA0 97 aa6.63□□□□□ -1.35
CNN1-208ENST00000588935 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
CNN1-208ENST00000588935 P0C880 135 aa6.58□□□□□ -1.36
CNN1-208ENST00000588935 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
CNN1-208ENST00000588935 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
CNN1-208ENST00000588935 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
CNN1-208ENST00000588935 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
CNN1-208ENST00000588935 USH2AO75445 5202 aa6.54□□□□□ -1.36
CNN1-208ENST00000588935 CRIPTQ9P021 101 aa6.54□□□□□ -1.36
CNN1-208ENST00000588935 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
CNN1-208ENST00000588935 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
CNN1-208ENST00000588935 TMEM258P61165 79 aa6.47□□□□□ -1.37
CNN1-208ENST00000588935 R4GN34 69 aa6.47□□□□□ -1.37
CNN1-208ENST00000588935 M0QZ58 72 aa6.46□□□□□ -1.38
CNN1-208ENST00000588935 Q5VV11 94 aa6.45□□□□□ -1.38
CNN1-208ENST00000588935 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
CNN1-208ENST00000588935 MT1BP07438 61 aa6.42□□□□□ -1.38
CNN1-208ENST00000588935 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
CNN1-208ENST00000588935 PCP4P48539 62 aa6.4□□□□□ -1.38
CNN1-208ENST00000588935 SEC61GP60059 68 aa6.4□□□□□ -1.38
CNN1-208ENST00000588935 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
CNN1-208ENST00000588935 SERP1Q9Y6X1 66 aa6.39□□□□□ -1.39
CNN1-208ENST00000588935 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
CNN1-208ENST00000588935 A0A1B0GU69 56 aa6.31□□□□□ -1.4
CNN1-208ENST00000588935 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
CNN1-208ENST00000588935 PLAC4Q8WY50 150 aa6.29□□□□□ -1.4
CNN1-208ENST00000588935 A0A1B0GU33 70 aa6.26□□□□□ -1.41
CNN1-208ENST00000588935 A6NN06 94 aa6.24□□□□□ -1.41
CNN1-208ENST00000588935 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
CNN1-208ENST00000588935 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
CNN1-208ENST00000588935 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.42
CNN1-208ENST00000588935 A0A0D9SG42 100 aa6.2□□□□□ -1.42
CNN1-208ENST00000588935 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
CNN1-208ENST00000588935 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
CNN1-208ENST00000588935 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
CNN1-208ENST00000588935 MT1XP80297 61 aa6.1□□□□□ -1.43
CNN1-208ENST00000588935 A8MU10 97 aa6.08□□□□□ -1.44
CNN1-208ENST00000588935 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
CNN1-208ENST00000588935 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
CNN1-208ENST00000588935 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
CNN1-208ENST00000588935 PSPHP1O15172 72 aa6.05□□□□□ -1.44
CNN1-208ENST00000588935 V9GYY9 64 aa6.05□□□□□ -1.44
CNN1-208ENST00000588935 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
CNN1-208ENST00000588935 Q1T7F1 81 aa6.03□□□□□ -1.44
CNN1-208ENST00000588935 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
CNN1-208ENST00000588935 UQCR11O14957 56 aa6□□□□□ -1.45
CNN1-208ENST00000588935 KRTAP12-1P59990 96 aa6□□□□□ -1.45
CNN1-208ENST00000588935 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
CNN1-208ENST00000588935 MACF1Q9UPN3 7388 aaKnown RBP5.94□□□□□ -1.46
CNN1-208ENST00000588935 KRTAP9-7A8MTY7 169 aa5.93□□□□□ -1.46
CNN1-208ENST00000588935 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
CNN1-208ENST00000588935 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
CNN1-208ENST00000588935 A6NED7 52 aa5.85□□□□□ -1.47
CNN1-208ENST00000588935 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
CNN1-208ENST00000588935 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
CNN1-208ENST00000588935 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
CNN1-208ENST00000588935 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
CNN1-208ENST00000588935 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
CNN1-208ENST00000588935 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
CNN1-208ENST00000588935 K7ERS5 55 aa5.73□□□□□ -1.49
CNN1-208ENST00000588935 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
CNN1-208ENST00000588935 KMT2DO14686 5537 aa5.69□□□□□ -1.5
CNN1-208ENST00000588935 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
CNN1-208ENST00000588935 KRTAP5-9P26371 169 aa5.64□□□□□ -1.51
CNN1-208ENST00000588935 TNP1P09430 55 aa5.63□□□□□ -1.51
CNN1-208ENST00000588935 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
CNN1-208ENST00000588935 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
CNN1-208ENST00000588935 SPRR2EP22531 72 aa5.49□□□□□ -1.53
CNN1-208ENST00000588935 SPRR2BP35325 72 aa5.49□□□□□ -1.53
CNN1-208ENST00000588935 SPRR2AP35326 72 aa5.49□□□□□ -1.53
CNN1-208ENST00000588935 NEBP20929 6669 aa5.48□□□□□ -1.53
CNN1-208ENST00000588935 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
CNN1-208ENST00000588935 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
CNN1-208ENST00000588935 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
CNN1-208ENST00000588935 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
CNN1-208ENST00000588935 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
CNN1-208ENST00000588935 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
CNN1-208ENST00000588935 ROMO1P60602 79 aa5.41□□□□□ -1.54
CNN1-208ENST00000588935 MT1EP04732 61 aa5.38□□□□□ -1.55
CNN1-208ENST00000588935 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
CNN1-208ENST00000588935 SPRR2DP22532 72 aa5.29□□□□□ -1.56
CNN1-208ENST00000588935 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
CNN1-208ENST00000588935 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms