RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 A8MUN3 132 aa7.23□□□□□ -1.25
NPC1-207ENST00000588867 SEC61GP60059 68 aa7.23□□□□□ -1.25
NPC1-207ENST00000588867 Q1T7F1 81 aa7.23□□□□□ -1.25
NPC1-207ENST00000588867 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
NPC1-207ENST00000588867 ACYP2P14621 99 aa7.2□□□□□ -1.26
NPC1-207ENST00000588867 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
NPC1-207ENST00000588867 PMAIP1Q13794 54 aa7.15□□□□□ -1.26
NPC1-207ENST00000588867 S4R3F8 94 aa7.14□□□□□ -1.27
NPC1-207ENST00000588867 LCA10Q71F78 164 aa7.11□□□□□ -1.27
NPC1-207ENST00000588867 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
NPC1-207ENST00000588867 COA5Q86WW8 74 aa7.1□□□□□ -1.27
NPC1-207ENST00000588867 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.28
NPC1-207ENST00000588867 PSPHP1O15172 72 aa7.07□□□□□ -1.28
NPC1-207ENST00000588867 MT1HP80294 61 aa7.07□□□□□ -1.28
NPC1-207ENST00000588867 M0R2T5 61 aa7.05□□□□□ -1.28
NPC1-207ENST00000588867 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
NPC1-207ENST00000588867 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
NPC1-207ENST00000588867 Q5VV11 94 aa7.01□□□□□ -1.29
NPC1-207ENST00000588867 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
NPC1-207ENST00000588867 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
NPC1-207ENST00000588867 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.29
NPC1-207ENST00000588867 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
NPC1-207ENST00000588867 KTN1-AS1Q86SY8 53 aa6.93□□□□□ -1.3
NPC1-207ENST00000588867 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
NPC1-207ENST00000588867 A8MU10 97 aa6.88□□□□□ -1.31
NPC1-207ENST00000588867 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
NPC1-207ENST00000588867 A6NED7 52 aa6.85□□□□□ -1.31
NPC1-207ENST00000588867 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
NPC1-207ENST00000588867 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
NPC1-207ENST00000588867 A6NN06 94 aa6.83□□□□□ -1.32
NPC1-207ENST00000588867 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
NPC1-207ENST00000588867 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
NPC1-207ENST00000588867 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
NPC1-207ENST00000588867 H0YAA0 97 aa6.78□□□□□ -1.32
NPC1-207ENST00000588867 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.32
NPC1-207ENST00000588867 MT2AP02795 61 aa6.74□□□□□ -1.33
NPC1-207ENST00000588867 A0A1B0GU69 56 aa6.74□□□□□ -1.33
NPC1-207ENST00000588867 P0C880 135 aa6.72□□□□□ -1.33
NPC1-207ENST00000588867 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
NPC1-207ENST00000588867 MT1FP04733 61 aa6.7□□□□□ -1.34
NPC1-207ENST00000588867 A0A1B0GU33 70 aa6.59□□□□□ -1.35
NPC1-207ENST00000588867 R4GN34 69 aa6.59□□□□□ -1.36
NPC1-207ENST00000588867 CRIPTQ9P021 101 aa6.58□□□□□ -1.36
NPC1-207ENST00000588867 M0QZ58 72 aa6.56□□□□□ -1.36
NPC1-207ENST00000588867 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
NPC1-207ENST00000588867 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
NPC1-207ENST00000588867 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
NPC1-207ENST00000588867 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
NPC1-207ENST00000588867 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
NPC1-207ENST00000588867 UQCR11O14957 56 aa6.48□□□□□ -1.37
NPC1-207ENST00000588867 LINC01554Q52M75 96 aa6.48□□□□□ -1.37
NPC1-207ENST00000588867 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
NPC1-207ENST00000588867 A0A0D9SG42 100 aa6.42□□□□□ -1.38
NPC1-207ENST00000588867 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
NPC1-207ENST00000588867 LCE2BO14633 110 aa6.4□□□□□ -1.39
NPC1-207ENST00000588867 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
NPC1-207ENST00000588867 MT1BP07438 61 aa6.28□□□□□ -1.4
NPC1-207ENST00000588867 SPINT4Q6UDR6 99 aa6.28□□□□□ -1.4
NPC1-207ENST00000588867 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
NPC1-207ENST00000588867 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
NPC1-207ENST00000588867 H3BS24 57 aa6.25□□□□□ -1.41
NPC1-207ENST00000588867 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
NPC1-207ENST00000588867 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
NPC1-207ENST00000588867 USH2AO75445 5202 aa6.21□□□□□ -1.42
NPC1-207ENST00000588867 K7ERS5 55 aa6.16□□□□□ -1.42
NPC1-207ENST00000588867 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
NPC1-207ENST00000588867 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
NPC1-207ENST00000588867 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
NPC1-207ENST00000588867 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
NPC1-207ENST00000588867 MT1XP80297 61 aa6.04□□□□□ -1.44
NPC1-207ENST00000588867 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
NPC1-207ENST00000588867 ROMO1P60602 79 aa6.03□□□□□ -1.44
NPC1-207ENST00000588867 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
NPC1-207ENST00000588867 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
NPC1-207ENST00000588867 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
NPC1-207ENST00000588867 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
NPC1-207ENST00000588867 KRTAP9-6A0A140TA67 174 aa5.86□□□□□ -1.47
NPC1-207ENST00000588867 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
NPC1-207ENST00000588867 TNP1P09430 55 aa5.8□□□□□ -1.48
NPC1-207ENST00000588867 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
NPC1-207ENST00000588867 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
NPC1-207ENST00000588867 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.51
NPC1-207ENST00000588867 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
NPC1-207ENST00000588867 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
NPC1-207ENST00000588867 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
NPC1-207ENST00000588867 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
NPC1-207ENST00000588867 KMT2DO14686 5537 aa5.58□□□□□ -1.52
NPC1-207ENST00000588867 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
NPC1-207ENST00000588867 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
NPC1-207ENST00000588867 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
NPC1-207ENST00000588867 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
NPC1-207ENST00000588867 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
NPC1-207ENST00000588867 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
NPC1-207ENST00000588867 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
NPC1-207ENST00000588867 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
NPC1-207ENST00000588867 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
NPC1-207ENST00000588867 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
NPC1-207ENST00000588867 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
NPC1-207ENST00000588867 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
NPC1-207ENST00000588867 KRTAP5-9P26371 169 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms