RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 PRR15LQ9BU68 103 aa8.36□□□□□ -1.07
NFIX-210ENST00000588228 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
NFIX-210ENST00000588228 Q5VV11 94 aa8.31□□□□□ -1.08
NFIX-210ENST00000588228 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
NFIX-210ENST00000588228 S4R3F8 94 aa8.27□□□□□ -1.08
NFIX-210ENST00000588228 LCA10Q71F78 164 aa8.27□□□□□ -1.09
NFIX-210ENST00000588228 A0A1B0GU69 56 aa8.26□□□□□ -1.09
NFIX-210ENST00000588228 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
NFIX-210ENST00000588228 SEC61GP60059 68 aa8.18□□□□□ -1.1
NFIX-210ENST00000588228 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
NFIX-210ENST00000588228 A6NED7 52 aa8.12□□□□□ -1.11
NFIX-210ENST00000588228 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
NFIX-210ENST00000588228 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
NFIX-210ENST00000588228 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
NFIX-210ENST00000588228 UQCR11O14957 56 aa8.03□□□□□ -1.12
NFIX-210ENST00000588228 CDC42SE1Q9NRR8 79 aa8.01□□□□□ -1.13
NFIX-210ENST00000588228 MUC2Q02817 5179 aa8□□□□□ -1.13
NFIX-210ENST00000588228 A0A1B0GU33 70 aa7.98□□□□□ -1.13
NFIX-210ENST00000588228 KRTAP3-2Q9BYR7 98 aa7.98□□□□□ -1.13
NFIX-210ENST00000588228 KRTAP10-6P60371 365 aaPredicted RBP7.97□□□□□ -1.13
NFIX-210ENST00000588228 A8MU10 97 aa7.95□□□□□ -1.14
NFIX-210ENST00000588228 MIR22HGQ0VDD5 57 aa7.95□□□□□ -1.14
NFIX-210ENST00000588228 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
NFIX-210ENST00000588228 H0YAA0 97 aa7.93□□□□□ -1.14
NFIX-210ENST00000588228 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
NFIX-210ENST00000588228 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
NFIX-210ENST00000588228 RNF213Q63HN8 5207 aa7.9□□□□□ -1.15
NFIX-210ENST00000588228 P0C880 135 aa7.89□□□□□ -1.15
NFIX-210ENST00000588228 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
NFIX-210ENST00000588228 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
NFIX-210ENST00000588228 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
NFIX-210ENST00000588228 M0QZ58 72 aa7.72□□□□□ -1.17
NFIX-210ENST00000588228 MT1HP80294 61 aa7.72□□□□□ -1.17
NFIX-210ENST00000588228 FAT4Q6V0I7 4981 aa7.7□□□□□ -1.18
NFIX-210ENST00000588228 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
NFIX-210ENST00000588228 M0R2T5 61 aa7.65□□□□□ -1.18
NFIX-210ENST00000588228 R4GN34 69 aa7.63□□□□□ -1.19
NFIX-210ENST00000588228 A0A0D9SG42 100 aa7.63□□□□□ -1.19
NFIX-210ENST00000588228 A6NN06 94 aa7.62□□□□□ -1.19
NFIX-210ENST00000588228 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
NFIX-210ENST00000588228 K7ERS5 55 aa7.58□□□□□ -1.2
NFIX-210ENST00000588228 CRIPTQ9P021 101 aa7.55□□□□□ -1.2
NFIX-210ENST00000588228 KRTAP12-1P59990 96 aa7.48□□□□□ -1.21
NFIX-210ENST00000588228 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
NFIX-210ENST00000588228 KRTAP12-2P59991 146 aa7.46□□□□□ -1.22
NFIX-210ENST00000588228 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
NFIX-210ENST00000588228 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
NFIX-210ENST00000588228 MT2AP02795 61 aa7.43□□□□□ -1.22
NFIX-210ENST00000588228 KTN1-AS1Q86SY8 53 aa7.43□□□□□ -1.22
NFIX-210ENST00000588228 MT1FP04733 61 aa7.39□□□□□ -1.23
NFIX-210ENST00000588228 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
NFIX-210ENST00000588228 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
NFIX-210ENST00000588228 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
NFIX-210ENST00000588228 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
NFIX-210ENST00000588228 ROMO1P60602 79 aa7.27□□□□□ -1.25
NFIX-210ENST00000588228 PRAC1Q96KF2 57 aa7.17□□□□□ -1.26
NFIX-210ENST00000588228 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
NFIX-210ENST00000588228 CAMK2N1Q7Z7J9 78 aa7.16□□□□□ -1.26
NFIX-210ENST00000588228 KRTAP19-8Q3LI54 63 aa7.15□□□□□ -1.27
NFIX-210ENST00000588228 PLAC4Q8WY50 150 aa7.13□□□□□ -1.27
NFIX-210ENST00000588228 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
NFIX-210ENST00000588228 MT1BP07438 61 aa7.03□□□□□ -1.28
NFIX-210ENST00000588228 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
NFIX-210ENST00000588228 LCE2BO14633 110 aa6.95□□□□□ -1.3
NFIX-210ENST00000588228 TNP1P09430 55 aa6.84□□□□□ -1.31
NFIX-210ENST00000588228 MT1XP80297 61 aa6.83□□□□□ -1.32
NFIX-210ENST00000588228 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
NFIX-210ENST00000588228 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
NFIX-210ENST00000588228 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
NFIX-210ENST00000588228 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
NFIX-210ENST00000588228 USH2AO75445 5202 aa6.72□□□□□ -1.33
NFIX-210ENST00000588228 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
NFIX-210ENST00000588228 LCE2DQ5TA82 110 aaPredicted RBP6.63□□□□□ -1.35
NFIX-210ENST00000588228 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
NFIX-210ENST00000588228 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
NFIX-210ENST00000588228 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
NFIX-210ENST00000588228 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
NFIX-210ENST00000588228 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
NFIX-210ENST00000588228 SSPOA2VEC9 5147 aa6.5□□□□□ -1.37
NFIX-210ENST00000588228 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
NFIX-210ENST00000588228 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
NFIX-210ENST00000588228 KRTAP8-1Q8IUC2 63 aa6.41□□□□□ -1.38
NFIX-210ENST00000588228 H3BS24 57 aa6.32□□□□□ -1.4
NFIX-210ENST00000588228 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
NFIX-210ENST00000588228 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
NFIX-210ENST00000588228 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
NFIX-210ENST00000588228 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
NFIX-210ENST00000588228 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
NFIX-210ENST00000588228 KMT2DO14686 5537 aa6.18□□□□□ -1.42
NFIX-210ENST00000588228 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
NFIX-210ENST00000588228 KRTAP19-7Q3SYF9 63 aa6.09□□□□□ -1.43
NFIX-210ENST00000588228 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
NFIX-210ENST00000588228 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
NFIX-210ENST00000588228 MT1EP04732 61 aa5.98□□□□□ -1.45
NFIX-210ENST00000588228 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
NFIX-210ENST00000588228 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
NFIX-210ENST00000588228 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
NFIX-210ENST00000588228 MT1LQ93083 61 aa5.88□□□□□ -1.47
NFIX-210ENST00000588228 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
NFIX-210ENST00000588228 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms