RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
CCDC43-203ENST00000588210 LPAP08519 4548 aa7.98□□□□□ -1.13
CCDC43-203ENST00000588210 UBR4Q5T4S7 5183 aa7.95□□□□□ -1.14
CCDC43-203ENST00000588210 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
CCDC43-203ENST00000588210 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
CCDC43-203ENST00000588210 UQCR11O14957 56 aa7.89□□□□□ -1.15
CCDC43-203ENST00000588210 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
CCDC43-203ENST00000588210 RBM12B-AS1Q9P1G2 102 aa7.87□□□□□ -1.15
CCDC43-203ENST00000588210 A8MUU9 505 aa7.85□□□□□ -1.15
CCDC43-203ENST00000588210 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
CCDC43-203ENST00000588210 C9orf92A6NGG3 77 aa7.79□□□□□ -1.16
CCDC43-203ENST00000588210 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
CCDC43-203ENST00000588210 XP32Q5T750 250 aa7.74□□□□□ -1.17
CCDC43-203ENST00000588210 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
CCDC43-203ENST00000588210 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.17
CCDC43-203ENST00000588210 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
CCDC43-203ENST00000588210 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
CCDC43-203ENST00000588210 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
CCDC43-203ENST00000588210 MUC2Q02817 5179 aa7.65□□□□□ -1.18
CCDC43-203ENST00000588210 H0YAA0 97 aa7.62□□□□□ -1.19
CCDC43-203ENST00000588210 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
CCDC43-203ENST00000588210 RPL37P61927 97 aaKnown RBP7.6□□□□□ -1.19
CCDC43-203ENST00000588210 A0A1B0GU33 70 aa7.58□□□□□ -1.2
CCDC43-203ENST00000588210 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
CCDC43-203ENST00000588210 KRTAP4-1Q9BYQ7 146 aa7.51□□□□□ -1.21
CCDC43-203ENST00000588210 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
CCDC43-203ENST00000588210 CSAG1Q6PB30 78 aa7.47□□□□□ -1.21
CCDC43-203ENST00000588210 FAT4Q6V0I7 4981 aa7.44□□□□□ -1.22
CCDC43-203ENST00000588210 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
CCDC43-203ENST00000588210 K7ERS5 55 aa7.36□□□□□ -1.23
CCDC43-203ENST00000588210 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
CCDC43-203ENST00000588210 S4R3F8 94 aa7.32□□□□□ -1.24
CCDC43-203ENST00000588210 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
CCDC43-203ENST00000588210 KRTAP19-2Q3LHN2 52 aa7.31□□□□□ -1.24
CCDC43-203ENST00000588210 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
CCDC43-203ENST00000588210 LCE2AQ5TA79 106 aaPredicted RBP7.29□□□□□ -1.24
CCDC43-203ENST00000588210 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
CCDC43-203ENST00000588210 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
CCDC43-203ENST00000588210 ROMO1P60602 79 aa7.2□□□□□ -1.26
CCDC43-203ENST00000588210 MT1HP80294 61 aa7.18□□□□□ -1.26
CCDC43-203ENST00000588210 P0C880 135 aa7.17□□□□□ -1.26
CCDC43-203ENST00000588210 A0A0D9SG42 100 aa7.16□□□□□ -1.26
CCDC43-203ENST00000588210 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
CCDC43-203ENST00000588210 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
CCDC43-203ENST00000588210 M0R2T5 61 aa7.08□□□□□ -1.28
CCDC43-203ENST00000588210 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
CCDC43-203ENST00000588210 M0QZ58 72 aa6.99□□□□□ -1.29
CCDC43-203ENST00000588210 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
CCDC43-203ENST00000588210 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
CCDC43-203ENST00000588210 SPINT4Q6UDR6 99 aa6.93□□□□□ -1.3
CCDC43-203ENST00000588210 C10orf95Q9H7T3 257 aa6.89□□□□□ -1.31
CCDC43-203ENST00000588210 KRTAP9-2Q9BYQ4 174 aa6.85□□□□□ -1.31
CCDC43-203ENST00000588210 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
CCDC43-203ENST00000588210 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
CCDC43-203ENST00000588210 H3BS24 57 aa6.78□□□□□ -1.32
CCDC43-203ENST00000588210 R4GN34 69 aa6.77□□□□□ -1.33
CCDC43-203ENST00000588210 MT2AP02795 61 aa6.75□□□□□ -1.33
CCDC43-203ENST00000588210 MT1FP04733 61 aa6.7□□□□□ -1.34
CCDC43-203ENST00000588210 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
CCDC43-203ENST00000588210 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
CCDC43-203ENST00000588210 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
CCDC43-203ENST00000588210 FSIP2Q5CZC0 6907 aa6.6□□□□□ -1.35
CCDC43-203ENST00000588210 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
CCDC43-203ENST00000588210 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
CCDC43-203ENST00000588210 LCE2BO14633 110 aa6.51□□□□□ -1.37
CCDC43-203ENST00000588210 USH2AO75445 5202 aa6.51□□□□□ -1.37
CCDC43-203ENST00000588210 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
CCDC43-203ENST00000588210 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
CCDC43-203ENST00000588210 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
CCDC43-203ENST00000588210 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
CCDC43-203ENST00000588210 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
CCDC43-203ENST00000588210 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
CCDC43-203ENST00000588210 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
CCDC43-203ENST00000588210 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
CCDC43-203ENST00000588210 KRTAP19-6Q3LI70 58 aa6.26□□□□□ -1.41
CCDC43-203ENST00000588210 MT1BP07438 61 aa6.22□□□□□ -1.41
CCDC43-203ENST00000588210 TNP1P09430 55 aa6.22□□□□□ -1.41
CCDC43-203ENST00000588210 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.41
CCDC43-203ENST00000588210 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.42
CCDC43-203ENST00000588210 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
CCDC43-203ENST00000588210 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
CCDC43-203ENST00000588210 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
CCDC43-203ENST00000588210 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
CCDC43-203ENST00000588210 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
CCDC43-203ENST00000588210 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
CCDC43-203ENST00000588210 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
CCDC43-203ENST00000588210 MT1XP80297 61 aa5.9□□□□□ -1.46
CCDC43-203ENST00000588210 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.47
CCDC43-203ENST00000588210 LCE3AQ5TA76 89 aa5.88□□□□□ -1.47
CCDC43-203ENST00000588210 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
CCDC43-203ENST00000588210 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
CCDC43-203ENST00000588210 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
CCDC43-203ENST00000588210 KMT2DO14686 5537 aa5.67□□□□□ -1.5
CCDC43-203ENST00000588210 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
CCDC43-203ENST00000588210 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
CCDC43-203ENST00000588210 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
CCDC43-203ENST00000588210 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
CCDC43-203ENST00000588210 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
CCDC43-203ENST00000588210 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
CCDC43-203ENST00000588210 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms