RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
SCAMP4-209ENST00000585335 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
SCAMP4-209ENST00000585335 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
SCAMP4-209ENST00000585335 NDUFC1O43677 76 aa6.97□□□□□ -1.29
SCAMP4-209ENST00000585335 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
SCAMP4-209ENST00000585335 FSIP2Q5CZC0 6907 aa6.96□□□□□ -1.3
SCAMP4-209ENST00000585335 ACYP2P14621 99 aa6.93□□□□□ -1.3
SCAMP4-209ENST00000585335 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
SCAMP4-209ENST00000585335 MT2AP02795 61 aa6.92□□□□□ -1.3
SCAMP4-209ENST00000585335 CRCT1Q9UGL9 99 aa6.92□□□□□ -1.3
SCAMP4-209ENST00000585335 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
SCAMP4-209ENST00000585335 MT1FP04733 61 aa6.86□□□□□ -1.31
SCAMP4-209ENST00000585335 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
SCAMP4-209ENST00000585335 SPTSSBQ8NFR3 76 aa6.84□□□□□ -1.31
SCAMP4-209ENST00000585335 H7BZZ5 65 aa6.81□□□□□ -1.32
SCAMP4-209ENST00000585335 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
SCAMP4-209ENST00000585335 CYSTM1Q9H1C7 97 aa6.78□□□□□ -1.32
SCAMP4-209ENST00000585335 H0YAA0 97 aa6.77□□□□□ -1.33
SCAMP4-209ENST00000585335 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
SCAMP4-209ENST00000585335 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
SCAMP4-209ENST00000585335 COA5Q86WW8 74 aa6.71□□□□□ -1.34
SCAMP4-209ENST00000585335 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
SCAMP4-209ENST00000585335 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
SCAMP4-209ENST00000585335 TMEM258P61165 79 aa6.62□□□□□ -1.35
SCAMP4-209ENST00000585335 LCE2BO14633 110 aa6.61□□□□□ -1.35
SCAMP4-209ENST00000585335 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
SCAMP4-209ENST00000585335 P0C880 135 aa6.56□□□□□ -1.36
SCAMP4-209ENST00000585335 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
SCAMP4-209ENST00000585335 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
SCAMP4-209ENST00000585335 R4GN34 69 aa6.54□□□□□ -1.36
SCAMP4-209ENST00000585335 SEC61GP60059 68 aa6.53□□□□□ -1.36
SCAMP4-209ENST00000585335 USH2AO75445 5202 aa6.51□□□□□ -1.37
SCAMP4-209ENST00000585335 Q5VV11 94 aa6.5□□□□□ -1.37
SCAMP4-209ENST00000585335 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
SCAMP4-209ENST00000585335 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
SCAMP4-209ENST00000585335 M0QZ58 72 aa6.49□□□□□ -1.37
SCAMP4-209ENST00000585335 PCP4P48539 62 aa6.47□□□□□ -1.37
SCAMP4-209ENST00000585335 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
SCAMP4-209ENST00000585335 A0A1B0GU69 56 aa6.4□□□□□ -1.38
SCAMP4-209ENST00000585335 MT1BP07438 61 aa6.39□□□□□ -1.39
SCAMP4-209ENST00000585335 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
SCAMP4-209ENST00000585335 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
SCAMP4-209ENST00000585335 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
SCAMP4-209ENST00000585335 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
SCAMP4-209ENST00000585335 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
SCAMP4-209ENST00000585335 A0A1B0GU33 70 aa6.32□□□□□ -1.4
SCAMP4-209ENST00000585335 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
SCAMP4-209ENST00000585335 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
SCAMP4-209ENST00000585335 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
SCAMP4-209ENST00000585335 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
SCAMP4-209ENST00000585335 A6NN06 94 aa6.26□□□□□ -1.41
SCAMP4-209ENST00000585335 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
SCAMP4-209ENST00000585335 V9GYY9 64 aa6.23□□□□□ -1.41
SCAMP4-209ENST00000585335 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
SCAMP4-209ENST00000585335 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
SCAMP4-209ENST00000585335 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
SCAMP4-209ENST00000585335 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
SCAMP4-209ENST00000585335 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
SCAMP4-209ENST00000585335 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
SCAMP4-209ENST00000585335 A0A0D9SG42 100 aa6.17□□□□□ -1.42
SCAMP4-209ENST00000585335 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
SCAMP4-209ENST00000585335 Q1T7F1 81 aa6.14□□□□□ -1.43
SCAMP4-209ENST00000585335 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
SCAMP4-209ENST00000585335 UQCR11O14957 56 aa6.12□□□□□ -1.43
SCAMP4-209ENST00000585335 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
SCAMP4-209ENST00000585335 MT1XP80297 61 aa6.09□□□□□ -1.43
SCAMP4-209ENST00000585335 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
SCAMP4-209ENST00000585335 PSPHP1O15172 72 aa6.07□□□□□ -1.44
SCAMP4-209ENST00000585335 A8MU10 97 aa6.04□□□□□ -1.44
SCAMP4-209ENST00000585335 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
SCAMP4-209ENST00000585335 MIR22HGQ0VDD5 57 aa6□□□□□ -1.45
SCAMP4-209ENST00000585335 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
SCAMP4-209ENST00000585335 A6NED7 52 aa5.93□□□□□ -1.46
SCAMP4-209ENST00000585335 NEBP20929 6669 aa5.91□□□□□ -1.46
SCAMP4-209ENST00000585335 K7ERS5 55 aa5.89□□□□□ -1.47
SCAMP4-209ENST00000585335 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
SCAMP4-209ENST00000585335 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
SCAMP4-209ENST00000585335 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
SCAMP4-209ENST00000585335 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
SCAMP4-209ENST00000585335 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
SCAMP4-209ENST00000585335 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
SCAMP4-209ENST00000585335 TNP1P09430 55 aa5.71□□□□□ -1.5
SCAMP4-209ENST00000585335 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
SCAMP4-209ENST00000585335 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
SCAMP4-209ENST00000585335 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
SCAMP4-209ENST00000585335 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
SCAMP4-209ENST00000585335 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
SCAMP4-209ENST00000585335 KMT2DO14686 5537 aa5.65□□□□□ -1.51
SCAMP4-209ENST00000585335 H3BS24 57 aa5.64□□□□□ -1.51
SCAMP4-209ENST00000585335 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
SCAMP4-209ENST00000585335 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
SCAMP4-209ENST00000585335 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
SCAMP4-209ENST00000585335 ROMO1P60602 79 aa5.49□□□□□ -1.53
SCAMP4-209ENST00000585335 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
SCAMP4-209ENST00000585335 SPRR2EP22531 72 aa5.47□□□□□ -1.53
SCAMP4-209ENST00000585335 SPRR2BP35325 72 aa5.47□□□□□ -1.53
SCAMP4-209ENST00000585335 SPRR2AP35326 72 aa5.47□□□□□ -1.53
SCAMP4-209ENST00000585335 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
SCAMP4-209ENST00000585335 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
SCAMP4-209ENST00000585335 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms