RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 SPINK6Q6UWN8 80 aa3.01□□□□□ -1.93
NF1-223ENST00000584328 UBR4Q5T4S7 5183 aa3.01□□□□□ -1.93
NF1-223ENST00000584328 K7EQZ3 153 aa3□□□□□ -1.93
NF1-223ENST00000584328 NDUFS5O43920 106 aa3□□□□□ -1.93
NF1-223ENST00000584328 ZNF861PO60384 105 aa3□□□□□ -1.93
NF1-223ENST00000584328 LINC00208Q96KT6 92 aa3□□□□□ -1.93
NF1-223ENST00000584328 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
NF1-223ENST00000584328 ATP11AUNQ6ZP68 121 aa2.99□□□□□ -1.93
NF1-223ENST00000584328 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
NF1-223ENST00000584328 LOC101927531A0A1B0GV80 90 aa2.98□□□□□ -1.93
NF1-223ENST00000584328 H0Y9P7 68 aa2.98□□□□□ -1.93
NF1-223ENST00000584328 A8MWP4 228 aa2.97□□□□□ -1.93
NF1-223ENST00000584328 PSPHP1O15172 72 aa2.97□□□□□ -1.93
NF1-223ENST00000584328 SPRR1BP22528 89 aa2.97□□□□□ -1.93
NF1-223ENST00000584328 Q5VV11 94 aa2.97□□□□□ -1.93
NF1-223ENST00000584328 IGFL1Q6UW32 110 aa2.97□□□□□ -1.93
NF1-223ENST00000584328 CASC2Q6XLA1 102 aa2.97□□□□□ -1.93
NF1-223ENST00000584328 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
NF1-223ENST00000584328 DMBT1Q9UGM3 2413 aaPredicted RBP2.96□□□□□ -1.94
NF1-223ENST00000584328 A8MUN3 132 aa2.96□□□□□ -1.94
NF1-223ENST00000584328 CHKB-CPT1BH3BT56 60 aa2.96□□□□□ -1.94
NF1-223ENST00000584328 PRLHP81277 87 aa2.96□□□□□ -1.94
NF1-223ENST00000584328 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
NF1-223ENST00000584328 WFDC13Q8IUB5 93 aa2.95□□□□□ -1.94
NF1-223ENST00000584328 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
NF1-223ENST00000584328 FLG2Q5D862 2391 aaPredicted RBP2.94□□□□□ -1.94
NF1-223ENST00000584328 A0A087WSZ3 146 aa2.94□□□□□ -1.94
NF1-223ENST00000584328 MOBPQ13875 183 aa2.94□□□□□ -1.94
NF1-223ENST00000584328 LINC00483Q53H64 154 aa2.94□□□□□ -1.94
NF1-223ENST00000584328 LINC00472Q9H8W2 130 aa2.94□□□□□ -1.94
NF1-223ENST00000584328 LINC01558Q9Y6Z2 57 aa2.94□□□□□ -1.94
NF1-223ENST00000584328 KRTAP13-2Q52LG2 175 aa2.93□□□□□ -1.94
NF1-223ENST00000584328 COA5Q86WW8 74 aa2.93□□□□□ -1.94
NF1-223ENST00000584328 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
NF1-223ENST00000584328 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
NF1-223ENST00000584328 A6NED7 52 aa2.92□□□□□ -1.94
NF1-223ENST00000584328 PRR4Q16378 134 aa2.92□□□□□ -1.94
NF1-223ENST00000584328 ASB16-AS1Q495Z4 193 aa2.91□□□□□ -1.94
NF1-223ENST00000584328 LRP2P98164 4655 aa2.9□□□□□ -1.94
NF1-223ENST00000584328 MMP24-AS1A0A0U1RRL7 71 aa2.9□□□□□ -1.95
NF1-223ENST00000584328 C7orf65Q6ZTY9 151 aa2.9□□□□□ -1.95
NF1-223ENST00000584328 ZNF706Q9Y5V0 76 aaPredicted RBP2.9□□□□□ -1.95
NF1-223ENST00000584328 A6NN06 94 aa2.89□□□□□ -1.95
NF1-223ENST00000584328 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
NF1-223ENST00000584328 DEFB116Q30KQ4 102 aa2.88□□□□□ -1.95
NF1-223ENST00000584328 LCA10Q71F78 164 aa2.88□□□□□ -1.95
NF1-223ENST00000584328 SPTSSBQ8NFR3 76 aa2.88□□□□□ -1.95
NF1-223ENST00000584328 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
NF1-223ENST00000584328 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
NF1-223ENST00000584328 A0A1B0GVX0 72 aa2.87□□□□□ -1.95
NF1-223ENST00000584328 ACYP2P14621 99 aa2.87□□□□□ -1.95
NF1-223ENST00000584328 LPAP08519 4548 aa2.87□□□□□ -1.95
NF1-223ENST00000584328 RPS29P62273 56 aaKnown RBP2.86□□□□□ -1.95
NF1-223ENST00000584328 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
NF1-223ENST00000584328 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
NF1-223ENST00000584328 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
NF1-223ENST00000584328 MRPL34Q9BQ48 92 aaKnown RBP2.86□□□□□ -1.95
NF1-223ENST00000584328 MUC2Q02817 5179 aa2.85□□□□□ -1.95
NF1-223ENST00000584328 C8orf87E5RJ46 101 aa2.85□□□□□ -1.95
NF1-223ENST00000584328 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
NF1-223ENST00000584328 HRES1P13985 223 aa2.84□□□□□ -1.95
NF1-223ENST00000584328 PCOTHQ58A44 107 aa2.84□□□□□ -1.95
NF1-223ENST00000584328 SPAG11AQ6PDA7 123 aa2.84□□□□□ -1.95
NF1-223ENST00000584328 LINC00304Q8N9R0 145 aa2.84□□□□□ -1.95
NF1-223ENST00000584328 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
NF1-223ENST00000584328 A0A0G2JQZ4 141 aa2.83□□□□□ -1.96
NF1-223ENST00000584328 Q96NJ1 140 aa2.83□□□□□ -1.96
NF1-223ENST00000584328 SPINK1P00995 79 aa2.82□□□□□ -1.96
NF1-223ENST00000584328 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
NF1-223ENST00000584328 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
NF1-223ENST00000584328 SPINK7P58062 85 aa2.8□□□□□ -1.96
NF1-223ENST00000584328 DMAC1Q96GE9 116 aa2.8□□□□□ -1.96
NF1-223ENST00000584328 A0A1B0GU69 56 aa2.79□□□□□ -1.96
NF1-223ENST00000584328 UQCR11O14957 56 aa2.79□□□□□ -1.96
NF1-223ENST00000584328 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
NF1-223ENST00000584328 TPRXLQ17RH7 258 aa2.78□□□□□ -1.96
NF1-223ENST00000584328 RETNLBQ9BQ08 111 aa2.77□□□□□ -1.97
NF1-223ENST00000584328 LINC00313P59037 77 aa2.76□□□□□ -1.97
NF1-223ENST00000584328 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
NF1-223ENST00000584328 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
NF1-223ENST00000584328 Q5W150 140 aa2.74□□□□□ -1.97
NF1-223ENST00000584328 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
NF1-223ENST00000584328 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
NF1-223ENST00000584328 C20orf166-AS1Q96NR2 134 aa2.66□□□□□ -1.98
NF1-223ENST00000584328 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
NF1-223ENST00000584328 C9orf92A6NGG3 77 aa2.65□□□□□ -1.99
NF1-223ENST00000584328 A8MUU9 505 aa2.65□□□□□ -1.99
NF1-223ENST00000584328 K7ERS5 55 aa2.65□□□□□ -1.99
NF1-223ENST00000584328 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
NF1-223ENST00000584328 CSAG1Q6PB30 78 aa2.64□□□□□ -1.99
NF1-223ENST00000584328 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
NF1-223ENST00000584328 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
NF1-223ENST00000584328 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
NF1-223ENST00000584328 CAMK2N1Q7Z7J9 78 aa2.61□□□□□ -1.99
NF1-223ENST00000584328 FLGP20930 4061 aaPredicted RBP2.6□□□□□ -1.99
NF1-223ENST00000584328 A0A1B0GU33 70 aa2.6□□□□□ -1.99
NF1-223ENST00000584328 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
NF1-223ENST00000584328 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
NF1-223ENST00000584328 H0YAA0 97 aa2.56□□□□□ -2
NF1-223ENST00000584328 ROMO1P60602 79 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms