RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 MT1HP80294 61 aa8.2□□□□□ -1.1
CDK5RAP3-230ENST00000584042 LCA10Q71F78 164 aa8.16□□□□□ -1.1
CDK5RAP3-230ENST00000584042 COA5Q86WW8 74 aa8.12□□□□□ -1.11
CDK5RAP3-230ENST00000584042 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
CDK5RAP3-230ENST00000584042 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-230ENST00000584042 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
CDK5RAP3-230ENST00000584042 M0R2T5 61 aa8.06□□□□□ -1.12
CDK5RAP3-230ENST00000584042 CSAG1Q6PB30 78 aa8.05□□□□□ -1.12
CDK5RAP3-230ENST00000584042 SPTSSBQ8NFR3 76 aa8.04□□□□□ -1.12
CDK5RAP3-230ENST00000584042 SERP1Q9Y6X1 66 aa8□□□□□ -1.13
CDK5RAP3-230ENST00000584042 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-230ENST00000584042 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-230ENST00000584042 H0YAA0 97 aa7.89□□□□□ -1.15
CDK5RAP3-230ENST00000584042 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
CDK5RAP3-230ENST00000584042 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-230ENST00000584042 MT2AP02795 61 aa7.81□□□□□ -1.16
CDK5RAP3-230ENST00000584042 ADM2Q7Z4H4 148 aa7.78□□□□□ -1.16
CDK5RAP3-230ENST00000584042 MT1FP04733 61 aa7.75□□□□□ -1.17
CDK5RAP3-230ENST00000584042 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
CDK5RAP3-230ENST00000584042 SMIM26A0A096LP01 95 aa7.73□□□□□ -1.17
CDK5RAP3-230ENST00000584042 SEC61GP60059 68 aa7.72□□□□□ -1.17
CDK5RAP3-230ENST00000584042 LINC01558Q9Y6Z2 57 aa7.72□□□□□ -1.17
CDK5RAP3-230ENST00000584042 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
CDK5RAP3-230ENST00000584042 P0C880 135 aa7.69□□□□□ -1.18
CDK5RAP3-230ENST00000584042 V9GYY9 64 aa7.69□□□□□ -1.18
CDK5RAP3-230ENST00000584042 A0A1B0GU69 56 aa7.68□□□□□ -1.18
CDK5RAP3-230ENST00000584042 Q1T7F1 81 aa7.66□□□□□ -1.18
CDK5RAP3-230ENST00000584042 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
CDK5RAP3-230ENST00000584042 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
CDK5RAP3-230ENST00000584042 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
CDK5RAP3-230ENST00000584042 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
CDK5RAP3-230ENST00000584042 R4GN34 69 aa7.55□□□□□ -1.2
CDK5RAP3-230ENST00000584042 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
CDK5RAP3-230ENST00000584042 M0QZ58 72 aa7.53□□□□□ -1.2
CDK5RAP3-230ENST00000584042 A0A1B0GU33 70 aa7.52□□□□□ -1.21
CDK5RAP3-230ENST00000584042 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
CDK5RAP3-230ENST00000584042 PSPHP1O15172 72 aa7.49□□□□□ -1.21
CDK5RAP3-230ENST00000584042 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
CDK5RAP3-230ENST00000584042 Q5VV11 94 aa7.47□□□□□ -1.21
CDK5RAP3-230ENST00000584042 KRTAP13-4Q3LI77 160 aa7.45□□□□□ -1.22
CDK5RAP3-230ENST00000584042 LCE2BO14633 110 aa7.4□□□□□ -1.22
CDK5RAP3-230ENST00000584042 UQCR11O14957 56 aa7.4□□□□□ -1.22
CDK5RAP3-230ENST00000584042 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
CDK5RAP3-230ENST00000584042 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
CDK5RAP3-230ENST00000584042 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
CDK5RAP3-230ENST00000584042 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
CDK5RAP3-230ENST00000584042 A6NN06 94 aa7.31□□□□□ -1.24
CDK5RAP3-230ENST00000584042 A6NED7 52 aa7.29□□□□□ -1.24
CDK5RAP3-230ENST00000584042 MT1BP07438 61 aa7.29□□□□□ -1.24
CDK5RAP3-230ENST00000584042 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
CDK5RAP3-230ENST00000584042 A0A0D9SG42 100 aa7.26□□□□□ -1.25
CDK5RAP3-230ENST00000584042 USH2AO75445 5202 aa7.25□□□□□ -1.25
CDK5RAP3-230ENST00000584042 A8MU10 97 aa7.24□□□□□ -1.25
CDK5RAP3-230ENST00000584042 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
CDK5RAP3-230ENST00000584042 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
CDK5RAP3-230ENST00000584042 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
CDK5RAP3-230ENST00000584042 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
CDK5RAP3-230ENST00000584042 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
CDK5RAP3-230ENST00000584042 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
CDK5RAP3-230ENST00000584042 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
CDK5RAP3-230ENST00000584042 SSPOA2VEC9 5147 aa7.1□□□□□ -1.27
CDK5RAP3-230ENST00000584042 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
CDK5RAP3-230ENST00000584042 K7ERS5 55 aa7.04□□□□□ -1.28
CDK5RAP3-230ENST00000584042 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
CDK5RAP3-230ENST00000584042 KRTAP10-5P60370 271 aa7□□□□□ -1.29
CDK5RAP3-230ENST00000584042 BRK1Q8WUW1 75 aa7□□□□□ -1.29
CDK5RAP3-230ENST00000584042 MT1XP80297 61 aa6.99□□□□□ -1.29
CDK5RAP3-230ENST00000584042 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
CDK5RAP3-230ENST00000584042 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
CDK5RAP3-230ENST00000584042 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
CDK5RAP3-230ENST00000584042 PRO0628Q9UI54 55 aa6.72□□□□□ -1.33
CDK5RAP3-230ENST00000584042 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.34
CDK5RAP3-230ENST00000584042 ROMO1P60602 79 aa6.68□□□□□ -1.34
CDK5RAP3-230ENST00000584042 KRTAP10-7P60409 375 aaPredicted RBP6.67□□□□□ -1.34
CDK5RAP3-230ENST00000584042 TNP1P09430 55 aa6.66□□□□□ -1.34
CDK5RAP3-230ENST00000584042 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
CDK5RAP3-230ENST00000584042 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
CDK5RAP3-230ENST00000584042 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
CDK5RAP3-230ENST00000584042 PMAIP1Q13794 54 aa6.59□□□□□ -1.35
CDK5RAP3-230ENST00000584042 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
CDK5RAP3-230ENST00000584042 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
CDK5RAP3-230ENST00000584042 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
CDK5RAP3-230ENST00000584042 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
CDK5RAP3-230ENST00000584042 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
CDK5RAP3-230ENST00000584042 SVIPQ8NHG7 77 aa6.4□□□□□ -1.38
CDK5RAP3-230ENST00000584042 KMT2DO14686 5537 aa6.39□□□□□ -1.39
CDK5RAP3-230ENST00000584042 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
CDK5RAP3-230ENST00000584042 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-230ENST00000584042 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
CDK5RAP3-230ENST00000584042 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
CDK5RAP3-230ENST00000584042 KRTAP5-9P26371 169 aa6.28□□□□□ -1.4
CDK5RAP3-230ENST00000584042 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
CDK5RAP3-230ENST00000584042 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
CDK5RAP3-230ENST00000584042 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
CDK5RAP3-230ENST00000584042 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
CDK5RAP3-230ENST00000584042 PRAC1Q96KF2 57 aa6.2□□□□□ -1.42
CDK5RAP3-230ENST00000584042 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
CDK5RAP3-230ENST00000584042 MT1EP04732 61 aa6.16□□□□□ -1.42
CDK5RAP3-230ENST00000584042 MUC12Q9UKN1 5478 aa6.07□□□□□ -1.44
CDK5RAP3-230ENST00000584042 NEBP20929 6669 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms