RNA–Protein interactions for RNA: ENST00000583524.5

PHF12-212, Transcript of PHD finger protein 12, humanhuman

TSL 1 (best)

Gene PHF12, Length 1,875 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-212ENST00000583524 A0A1B0GU69 56 aa13.93□□□□□ -0.18
PHF12-212ENST00000583524 RBM12B-AS1Q9P1G2 102 aa13.93□□□□□ -0.18
PHF12-212ENST00000583524 PCLOQ9Y6V0 5065 aa13.91□□□□□ -0.18
PHF12-212ENST00000583524 H1FX-AS1Q4G0G2 97 aa13.87□□□□□ -0.19
PHF12-212ENST00000583524 S4R3F8 94 aa13.82□□□□□ -0.2
PHF12-212ENST00000583524 SEC61GP60059 68 aa13.79□□□□□ -0.2
PHF12-212ENST00000583524 LCA10Q71F78 164 aa13.78□□□□□ -0.2
PHF12-212ENST00000583524 MUC17Q685J3 4493 aa13.78□□□□□ -0.2
PHF12-212ENST00000583524 A6NED7 52 aa13.77□□□□□ -0.21
PHF12-212ENST00000583524 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
PHF12-212ENST00000583524 KRTAP4-1Q9BYQ7 146 aa13.7□□□□□ -0.22
PHF12-212ENST00000583524 HERC1Q15751 4861 aa13.68□□□□□ -0.22
PHF12-212ENST00000583524 HMCN2Q8NDA2 5059 aa13.66□□□□□ -0.22
PHF12-212ENST00000583524 CDC42SE1Q9NRR8 79 aa13.6□□□□□ -0.23
PHF12-212ENST00000583524 UQCR11O14957 56 aa13.57□□□□□ -0.24
PHF12-212ENST00000583524 CSAG1Q6PB30 78 aa13.5□□□□□ -0.25
PHF12-212ENST00000583524 A8MU10 97 aa13.46□□□□□ -0.26
PHF12-212ENST00000583524 SPATA8Q6RVD6 105 aa13.45□□□□□ -0.26
PHF12-212ENST00000583524 A0A1B0GU33 70 aa13.42□□□□□ -0.26
PHF12-212ENST00000583524 MIR22HGQ0VDD5 57 aa13.42□□□□□ -0.26
PHF12-212ENST00000583524 KRTAP19-2Q3LHN2 52 aa13.42□□□□□ -0.26
PHF12-212ENST00000583524 KRTAP10-6P60371 365 aaPredicted RBP13.35□□□□□ -0.27
PHF12-212ENST00000583524 KRTAP3-2Q9BYR7 98 aa13.34□□□□□ -0.27
PHF12-212ENST00000583524 PMAIP1Q13794 54 aa13.28□□□□□ -0.28
PHF12-212ENST00000583524 H0YAA0 97 aa13.27□□□□□ -0.28
PHF12-212ENST00000583524 ADM2Q7Z4H4 148 aa13.23□□□□□ -0.29
PHF12-212ENST00000583524 P0C880 135 aa13.18□□□□□ -0.3
PHF12-212ENST00000583524 MUC2Q02817 5179 aa13.15□□□□□ -0.3
PHF12-212ENST00000583524 FLGP20930 4061 aaPredicted RBP13.09□□□□□ -0.31
PHF12-212ENST00000583524 A6NN06 94 aa13.03□□□□□ -0.32
PHF12-212ENST00000583524 KTN1-AS1Q86SY8 53 aa13.02□□□□□ -0.33
PHF12-212ENST00000583524 KRTAP13-4Q3LI77 160 aa12.99□□□□□ -0.33
PHF12-212ENST00000583524 LCE2CQ5TA81 110 aa12.99□□□□□ -0.33
PHF12-212ENST00000583524 M0QZ58 72 aa12.95□□□□□ -0.34
PHF12-212ENST00000583524 RNF213Q63HN8 5207 aa12.94□□□□□ -0.34
PHF12-212ENST00000583524 UBR4Q5T4S7 5183 aa12.93□□□□□ -0.34
PHF12-212ENST00000583524 K7ERS5 55 aa12.8□□□□□ -0.36
PHF12-212ENST00000583524 A0A0D9SG42 100 aa12.78□□□□□ -0.36
PHF12-212ENST00000583524 R4GN34 69 aa12.75□□□□□ -0.37
PHF12-212ENST00000583524 MT1HP80294 61 aa12.7□□□□□ -0.38
PHF12-212ENST00000583524 LORP23490 312 aaPredicted RBP12.65□□□□□ -0.38
PHF12-212ENST00000583524 M0R2T5 61 aa12.61□□□□□ -0.39
PHF12-212ENST00000583524 FAT4Q6V0I7 4981 aa12.61□□□□□ -0.39
PHF12-212ENST00000583524 CRIPTQ9P021 101 aa12.6□□□□□ -0.39
PHF12-212ENST00000583524 KRTAP12-1P59990 96 aa12.55□□□□□ -0.4
PHF12-212ENST00000583524 KRTAP12-2P59991 146 aa12.51□□□□□ -0.41
PHF12-212ENST00000583524 LINC01554Q52M75 96 aa12.48□□□□□ -0.41
PHF12-212ENST00000583524 SPINT4Q6UDR6 99 aa12.47□□□□□ -0.41
PHF12-212ENST00000583524 ROMO1P60602 79 aa12.3□□□□□ -0.44
PHF12-212ENST00000583524 KRTAP9-8Q9BYQ0 159 aa12.29□□□□□ -0.44
PHF12-212ENST00000583524 MT2AP02795 61 aa12.28□□□□□ -0.44
PHF12-212ENST00000583524 PRAC1Q96KF2 57 aa12.28□□□□□ -0.44
PHF12-212ENST00000583524 SPRR2GQ9BYE4 73 aa12.23□□□□□ -0.45
PHF12-212ENST00000583524 MT1FP04733 61 aa12.21□□□□□ -0.46
PHF12-212ENST00000583524 KRTAP10-10P60014 251 aa12.19□□□□□ -0.46
PHF12-212ENST00000583524 KRTAP19-1Q8IUB9 90 aa12.12□□□□□ -0.47
PHF12-212ENST00000583524 LCE2AQ5TA79 106 aaPredicted RBP12.01□□□□□ -0.49
PHF12-212ENST00000583524 CAMK2N1Q7Z7J9 78 aa11.98□□□□□ -0.49
PHF12-212ENST00000583524 KRTAP25-1Q3LHN0 102 aa11.9□□□□□ -0.5
PHF12-212ENST00000583524 PLAC4Q8WY50 150 aa11.88□□□□□ -0.51
PHF12-212ENST00000583524 KRTAP19-8Q3LI54 63 aa11.85□□□□□ -0.51
PHF12-212ENST00000583524 C10orf95Q9H7T3 257 aa11.85□□□□□ -0.51
PHF12-212ENST00000583524 KRTAP9-3Q9BYQ3 159 aa11.84□□□□□ -0.51
PHF12-212ENST00000583524 MT1BP07438 61 aa11.63□□□□□ -0.55
PHF12-212ENST00000583524 TNP1P09430 55 aa11.47□□□□□ -0.57
PHF12-212ENST00000583524 LCE2BO14633 110 aa11.43□□□□□ -0.58
PHF12-212ENST00000583524 PP632Q6XCG6 107 aa11.34□□□□□ -0.59
PHF12-212ENST00000583524 MT1XP80297 61 aa11.32□□□□□ -0.6
PHF12-212ENST00000583524 KRTAP10-5P60370 271 aa11.32□□□□□ -0.6
PHF12-212ENST00000583524 KRTAP23-1A1A580 65 aa11.27□□□□□ -0.6
PHF12-212ENST00000583524 PRO2289Q9P1D8 64 aa11.23□□□□□ -0.61
PHF12-212ENST00000583524 USH2AO75445 5202 aa11.02□□□□□ -0.65
PHF12-212ENST00000583524 LCE3AQ5TA76 89 aa10.88□□□□□ -0.67
PHF12-212ENST00000583524 KRTAP10-7P60409 375 aaPredicted RBP10.86□□□□□ -0.67
PHF12-212ENST00000583524 KRTAP10-12P60413 245 aa10.85□□□□□ -0.67
PHF12-212ENST00000583524 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
PHF12-212ENST00000583524 H3BS24 57 aa10.76□□□□□ -0.69
PHF12-212ENST00000583524 KRTAP8-1Q8IUC2 63 aa10.73□□□□□ -0.69
PHF12-212ENST00000583524 KRTAP19-6Q3LI70 58 aa10.71□□□□□ -0.69
PHF12-212ENST00000583524 KRTAP15-1Q3LI76 137 aa10.7□□□□□ -0.7
PHF12-212ENST00000583524 SSPOA2VEC9 5147 aa10.66□□□□□ -0.7
PHF12-212ENST00000583524 KRTAP12-3P60328 96 aa10.47□□□□□ -0.73
PHF12-212ENST00000583524 KRTAP4-8A0A0G2JLE6 195 aa10.34□□□□□ -0.75
PHF12-212ENST00000583524 KRTAP4-8Q9BYQ9 185 aa10.34□□□□□ -0.75
PHF12-212ENST00000583524 NDUFAF8A1L188 74 aa10.33□□□□□ -0.76
PHF12-212ENST00000583524 KRTAP19-5Q3LI72 72 aa10.29□□□□□ -0.76
PHF12-212ENST00000583524 FSIP2Q5CZC0 6907 aa10.29□□□□□ -0.76
PHF12-212ENST00000583524 KMT2DO14686 5537 aa10.2□□□□□ -0.78
PHF12-212ENST00000583524 KRTAP9-2Q9BYQ4 174 aa10.18□□□□□ -0.78
PHF12-212ENST00000583524 SPRR5A0A1B0GTR4 108 aa10.15□□□□□ -0.79
PHF12-212ENST00000583524 FCGBPQ9Y6R7 5405 aaPredicted RBP10.12□□□□□ -0.79
PHF12-212ENST00000583524 KRTAP19-7Q3SYF9 63 aa10.1□□□□□ -0.79
PHF12-212ENST00000583524 LUZP6Q538Z0 58 aa9.94□□□□□ -0.82
PHF12-212ENST00000583524 MT1EP04732 61 aa9.91□□□□□ -0.82
PHF12-212ENST00000583524 CRCT1Q9UGL9 99 aa9.89□□□□□ -0.83
PHF12-212ENST00000583524 KRTAP19-4Q3LI73 84 aa9.88□□□□□ -0.83
PHF12-212ENST00000583524 LCE3CQ5T5A8 94 aa9.81□□□□□ -0.84
PHF12-212ENST00000583524 MT1LQ93083 61 aa9.76□□□□□ -0.85
PHF12-212ENST00000583524 KRTAP9-6A0A140TA67 174 aa9.57□□□□□ -0.88
PHF12-212ENST00000583524 MACF1Q9UPN3 7388 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms