RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
SS18-222ENST00000582792 H3BPC8 53 aa6.34□□□□□ -1.39
SS18-222ENST00000582792 MP68P56378 58 aa6.34□□□□□ -1.39
SS18-222ENST00000582792 SMIM20Q8N5G0 67 aa6.34□□□□□ -1.39
SS18-222ENST00000582792 C4orf26Q17RF5 130 aa6.33□□□□□ -1.4
SS18-222ENST00000582792 C1orf64Q8NEQ6 169 aa6.32□□□□□ -1.4
SS18-222ENST00000582792 FAM236AA0A1B0GUQ0 79 aa6.3□□□□□ -1.4
SS18-222ENST00000582792 FAM236BA0A1B0GV22 79 aa6.3□□□□□ -1.4
SS18-222ENST00000582792 LINC00208Q96KT6 92 aa6.3□□□□□ -1.4
SS18-222ENST00000582792 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
SS18-222ENST00000582792 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
SS18-222ENST00000582792 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
SS18-222ENST00000582792 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
SS18-222ENST00000582792 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
SS18-222ENST00000582792 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
SS18-222ENST00000582792 A6NN06 94 aa6.22□□□□□ -1.41
SS18-222ENST00000582792 KLKP1Q107X0 134 aa6.22□□□□□ -1.41
SS18-222ENST00000582792 A8MUN3 132 aa6.2□□□□□ -1.42
SS18-222ENST00000582792 S4R3F8 94 aa6.19□□□□□ -1.42
SS18-222ENST00000582792 MT1BP07438 61 aa6.17□□□□□ -1.42
SS18-222ENST00000582792 SERP2Q8N6R1 65 aa6.16□□□□□ -1.42
SS18-222ENST00000582792 Q5VV11 94 aa6.13□□□□□ -1.43
SS18-222ENST00000582792 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
SS18-222ENST00000582792 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
SS18-222ENST00000582792 LCA10Q71F78 164 aa6.12□□□□□ -1.43
SS18-222ENST00000582792 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
SS18-222ENST00000582792 KMT2DO14686 5537 aa6.11□□□□□ -1.43
SS18-222ENST00000582792 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
SS18-222ENST00000582792 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
SS18-222ENST00000582792 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
SS18-222ENST00000582792 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
SS18-222ENST00000582792 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
SS18-222ENST00000582792 NDUFC1O43677 76 aa6.05□□□□□ -1.44
SS18-222ENST00000582792 COX7CP15954 63 aa6.05□□□□□ -1.44
SS18-222ENST00000582792 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
SS18-222ENST00000582792 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
SS18-222ENST00000582792 ACYP2P14621 99 aa6.01□□□□□ -1.45
SS18-222ENST00000582792 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
SS18-222ENST00000582792 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
SS18-222ENST00000582792 H0YAA0 97 aa5.97□□□□□ -1.45
SS18-222ENST00000582792 ANAPC13Q9BS18 74 aa5.96□□□□□ -1.46
SS18-222ENST00000582792 H7BZZ5 65 aa5.89□□□□□ -1.47
SS18-222ENST00000582792 SPTSSBQ8NFR3 76 aa5.89□□□□□ -1.47
SS18-222ENST00000582792 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
SS18-222ENST00000582792 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
SS18-222ENST00000582792 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
SS18-222ENST00000582792 SPRR2EP22531 72 aa5.84□□□□□ -1.47
SS18-222ENST00000582792 SPRR2BP35325 72 aa5.84□□□□□ -1.47
SS18-222ENST00000582792 SPRR2AP35326 72 aa5.84□□□□□ -1.47
SS18-222ENST00000582792 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
SS18-222ENST00000582792 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
SS18-222ENST00000582792 CCDC179H3BU77 68 aa5.82□□□□□ -1.48
SS18-222ENST00000582792 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
SS18-222ENST00000582792 COA5Q86WW8 74 aa5.79□□□□□ -1.48
SS18-222ENST00000582792 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
SS18-222ENST00000582792 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
SS18-222ENST00000582792 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
SS18-222ENST00000582792 ATP5EP56381 51 aaPredicted RBP5.74□□□□□ -1.49
SS18-222ENST00000582792 P0C880 135 aa5.73□□□□□ -1.49
SS18-222ENST00000582792 PCP4P48539 62 aa5.73□□□□□ -1.49
SS18-222ENST00000582792 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
SS18-222ENST00000582792 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
SS18-222ENST00000582792 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
SS18-222ENST00000582792 MT1XP80297 61 aa5.7□□□□□ -1.5
SS18-222ENST00000582792 TMEM258P61165 79 aa5.67□□□□□ -1.5
SS18-222ENST00000582792 R4GN34 69 aa5.67□□□□□ -1.5
SS18-222ENST00000582792 SPRR2DP22532 72 aa5.65□□□□□ -1.5
SS18-222ENST00000582792 KRTAP12-2P59991 146 aa5.63□□□□□ -1.51
SS18-222ENST00000582792 M0QZ58 72 aa5.62□□□□□ -1.51
SS18-222ENST00000582792 SEC61GP60059 68 aa5.6□□□□□ -1.51
SS18-222ENST00000582792 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
SS18-222ENST00000582792 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
SS18-222ENST00000582792 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
SS18-222ENST00000582792 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
SS18-222ENST00000582792 A0A1B0GU69 56 aa5.48□□□□□ -1.53
SS18-222ENST00000582792 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
SS18-222ENST00000582792 KRTAP4-12Q9BQ66 201 aa5.48□□□□□ -1.53
SS18-222ENST00000582792 A0A1B0GU33 70 aa5.46□□□□□ -1.54
SS18-222ENST00000582792 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
SS18-222ENST00000582792 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.54
SS18-222ENST00000582792 PRR15LQ9BU68 103 aa5.44□□□□□ -1.54
SS18-222ENST00000582792 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
SS18-222ENST00000582792 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
SS18-222ENST00000582792 GPR98Q8WXG9 6306 aa5.39□□□□□ -1.55
SS18-222ENST00000582792 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
SS18-222ENST00000582792 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
SS18-222ENST00000582792 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
SS18-222ENST00000582792 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
SS18-222ENST00000582792 V9GYY9 64 aa5.34□□□□□ -1.55
SS18-222ENST00000582792 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
SS18-222ENST00000582792 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
SS18-222ENST00000582792 A0A0D9SG42 100 aa5.3□□□□□ -1.56
SS18-222ENST00000582792 Q1T7F1 81 aa5.3□□□□□ -1.56
SS18-222ENST00000582792 UQCR11O14957 56 aa5.26□□□□□ -1.57
SS18-222ENST00000582792 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
SS18-222ENST00000582792 CAMK2N1Q7Z7J9 78 aa5.25□□□□□ -1.57
SS18-222ENST00000582792 SPINT4Q6UDR6 99 aa5.23□□□□□ -1.57
SS18-222ENST00000582792 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
SS18-222ENST00000582792 A8MU10 97 aa5.21□□□□□ -1.58
SS18-222ENST00000582792 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms