RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 LCA10Q71F78 164 aa4.43□□□□□ -1.7
CDK5RAP3-220ENST00000581160 PCP4P48539 62 aa4.42□□□□□ -1.7
CDK5RAP3-220ENST00000581160 KRTAP3-3Q9BYR6 98 aa4.42□□□□□ -1.7
CDK5RAP3-220ENST00000581160 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
CDK5RAP3-220ENST00000581160 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
CDK5RAP3-220ENST00000581160 TMEM258P61165 79 aa4.38□□□□□ -1.71
CDK5RAP3-220ENST00000581160 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
CDK5RAP3-220ENST00000581160 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
CDK5RAP3-220ENST00000581160 CHKB-CPT1BH3BT56 60 aa4.36□□□□□ -1.71
CDK5RAP3-220ENST00000581160 COA5Q86WW8 74 aa4.35□□□□□ -1.71
CDK5RAP3-220ENST00000581160 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
CDK5RAP3-220ENST00000581160 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
CDK5RAP3-220ENST00000581160 MT2AP02795 61 aa4.3□□□□□ -1.72
CDK5RAP3-220ENST00000581160 H0YAA0 97 aa4.29□□□□□ -1.72
CDK5RAP3-220ENST00000581160 MT1FP04733 61 aa4.26□□□□□ -1.73
CDK5RAP3-220ENST00000581160 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
CDK5RAP3-220ENST00000581160 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
CDK5RAP3-220ENST00000581160 SERP1Q9Y6X1 66 aa4.25□□□□□ -1.73
CDK5RAP3-220ENST00000581160 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
CDK5RAP3-220ENST00000581160 ADM2Q7Z4H4 148 aa4.24□□□□□ -1.73
CDK5RAP3-220ENST00000581160 KRTAP3-2Q9BYR7 98 aa4.22□□□□□ -1.73
CDK5RAP3-220ENST00000581160 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
CDK5RAP3-220ENST00000581160 P0C880 135 aa4.18□□□□□ -1.74
CDK5RAP3-220ENST00000581160 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
CDK5RAP3-220ENST00000581160 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
CDK5RAP3-220ENST00000581160 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
CDK5RAP3-220ENST00000581160 SEC61GP60059 68 aa4.17□□□□□ -1.74
CDK5RAP3-220ENST00000581160 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
CDK5RAP3-220ENST00000581160 A0A1B0GU69 56 aa4.13□□□□□ -1.75
CDK5RAP3-220ENST00000581160 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
CDK5RAP3-220ENST00000581160 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
CDK5RAP3-220ENST00000581160 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
CDK5RAP3-220ENST00000581160 LCE2BO14633 110 aa4.1□□□□□ -1.75
CDK5RAP3-220ENST00000581160 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
CDK5RAP3-220ENST00000581160 R4GN34 69 aa4.1□□□□□ -1.75
CDK5RAP3-220ENST00000581160 V9GYY9 64 aa4.1□□□□□ -1.75
CDK5RAP3-220ENST00000581160 M0QZ58 72 aa4.09□□□□□ -1.75
CDK5RAP3-220ENST00000581160 Q1T7F1 81 aa4.09□□□□□ -1.75
CDK5RAP3-220ENST00000581160 A0A1B0GU33 70 aa4.08□□□□□ -1.76
CDK5RAP3-220ENST00000581160 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
CDK5RAP3-220ENST00000581160 USH2AO75445 5202 aa4.04□□□□□ -1.76
CDK5RAP3-220ENST00000581160 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
CDK5RAP3-220ENST00000581160 Q5VV11 94 aa4.03□□□□□ -1.76
CDK5RAP3-220ENST00000581160 PSPHP1O15172 72 aa4□□□□□ -1.77
CDK5RAP3-220ENST00000581160 MT1BP07438 61 aa4□□□□□ -1.77
CDK5RAP3-220ENST00000581160 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
CDK5RAP3-220ENST00000581160 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
CDK5RAP3-220ENST00000581160 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
CDK5RAP3-220ENST00000581160 UQCR11O14957 56 aa3.97□□□□□ -1.77
CDK5RAP3-220ENST00000581160 A6NN06 94 aa3.96□□□□□ -1.78
CDK5RAP3-220ENST00000581160 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.78
CDK5RAP3-220ENST00000581160 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
CDK5RAP3-220ENST00000581160 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
CDK5RAP3-220ENST00000581160 A0A0D9SG42 100 aa3.93□□□□□ -1.78
CDK5RAP3-220ENST00000581160 A8MU10 97 aa3.91□□□□□ -1.78
CDK5RAP3-220ENST00000581160 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
CDK5RAP3-220ENST00000581160 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
CDK5RAP3-220ENST00000581160 A6NED7 52 aa3.88□□□□□ -1.79
CDK5RAP3-220ENST00000581160 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
CDK5RAP3-220ENST00000581160 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
CDK5RAP3-220ENST00000581160 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
CDK5RAP3-220ENST00000581160 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
CDK5RAP3-220ENST00000581160 MT1XP80297 61 aa3.82□□□□□ -1.8
CDK5RAP3-220ENST00000581160 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
CDK5RAP3-220ENST00000581160 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
CDK5RAP3-220ENST00000581160 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
CDK5RAP3-220ENST00000581160 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
CDK5RAP3-220ENST00000581160 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
CDK5RAP3-220ENST00000581160 K7ERS5 55 aa3.77□□□□□ -1.81
CDK5RAP3-220ENST00000581160 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
CDK5RAP3-220ENST00000581160 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
CDK5RAP3-220ENST00000581160 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
CDK5RAP3-220ENST00000581160 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
CDK5RAP3-220ENST00000581160 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.83
CDK5RAP3-220ENST00000581160 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
CDK5RAP3-220ENST00000581160 TNP1P09430 55 aa3.61□□□□□ -1.83
CDK5RAP3-220ENST00000581160 ROMO1P60602 79 aa3.58□□□□□ -1.84
CDK5RAP3-220ENST00000581160 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
CDK5RAP3-220ENST00000581160 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
CDK5RAP3-220ENST00000581160 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
CDK5RAP3-220ENST00000581160 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
CDK5RAP3-220ENST00000581160 KMT2DO14686 5537 aa3.53□□□□□ -1.84
CDK5RAP3-220ENST00000581160 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
CDK5RAP3-220ENST00000581160 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
CDK5RAP3-220ENST00000581160 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
CDK5RAP3-220ENST00000581160 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
CDK5RAP3-220ENST00000581160 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
CDK5RAP3-220ENST00000581160 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
CDK5RAP3-220ENST00000581160 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
CDK5RAP3-220ENST00000581160 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
CDK5RAP3-220ENST00000581160 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
CDK5RAP3-220ENST00000581160 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
CDK5RAP3-220ENST00000581160 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
CDK5RAP3-220ENST00000581160 MT1EP04732 61 aa3.37□□□□□ -1.87
CDK5RAP3-220ENST00000581160 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
CDK5RAP3-220ENST00000581160 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
CDK5RAP3-220ENST00000581160 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
CDK5RAP3-220ENST00000581160 NEBP20929 6669 aa3.31□□□□□ -1.88
CDK5RAP3-220ENST00000581160 SPRR2EP22531 72 aa3.31□□□□□ -1.88
CDK5RAP3-220ENST00000581160 SPRR2BP35325 72 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms