RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 H7BZZ5 65 aa4.22□□□□□ -1.73
KPNB1-210ENST00000580573 NDUFC1O43677 76 aa4.22□□□□□ -1.73
KPNB1-210ENST00000580573 C1orf64Q8NEQ6 169 aa4.22□□□□□ -1.73
KPNB1-210ENST00000580573 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
KPNB1-210ENST00000580573 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
KPNB1-210ENST00000580573 ATP11AUNQ6ZP68 121 aa4.18□□□□□ -1.74
KPNB1-210ENST00000580573 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
KPNB1-210ENST00000580573 TMEM258P61165 79 aa4.17□□□□□ -1.74
KPNB1-210ENST00000580573 SPANXA2-OT1Q8N9U9 137 aa4.17□□□□□ -1.74
KPNB1-210ENST00000580573 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
KPNB1-210ENST00000580573 SPINK7P58062 85 aa4.15□□□□□ -1.75
KPNB1-210ENST00000580573 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
KPNB1-210ENST00000580573 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
KPNB1-210ENST00000580573 PCOTHQ58A44 107 aa4.14□□□□□ -1.75
KPNB1-210ENST00000580573 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
KPNB1-210ENST00000580573 HRES1P13985 223 aa4.12□□□□□ -1.75
KPNB1-210ENST00000580573 FAM236DA0A1B0GTK5 79 aa4.11□□□□□ -1.75
KPNB1-210ENST00000580573 FAM236CP0DP71 79 aa4.11□□□□□ -1.75
KPNB1-210ENST00000580573 DMAC1Q96GE9 116 aa4.09□□□□□ -1.75
KPNB1-210ENST00000580573 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
KPNB1-210ENST00000580573 A8MUN3 132 aa4.06□□□□□ -1.76
KPNB1-210ENST00000580573 C4orf26Q17RF5 130 aa4.06□□□□□ -1.76
KPNB1-210ENST00000580573 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
KPNB1-210ENST00000580573 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
KPNB1-210ENST00000580573 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
KPNB1-210ENST00000580573 SERP1Q9Y6X1 66 aa4.03□□□□□ -1.76
KPNB1-210ENST00000580573 ACYP2P14621 99 aa4.01□□□□□ -1.77
KPNB1-210ENST00000580573 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
KPNB1-210ENST00000580573 COA5Q86WW8 74 aa3.99□□□□□ -1.77
KPNB1-210ENST00000580573 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
KPNB1-210ENST00000580573 MUC2Q02817 5179 aa3.98□□□□□ -1.77
KPNB1-210ENST00000580573 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
KPNB1-210ENST00000580573 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
KPNB1-210ENST00000580573 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
KPNB1-210ENST00000580573 LCA10Q71F78 164 aa3.91□□□□□ -1.78
KPNB1-210ENST00000580573 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
KPNB1-210ENST00000580573 S4R3F8 94 aa3.9□□□□□ -1.79
KPNB1-210ENST00000580573 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
KPNB1-210ENST00000580573 Q1T7F1 81 aa3.87□□□□□ -1.79
KPNB1-210ENST00000580573 SPTSSBQ8NFR3 76 aa3.87□□□□□ -1.79
KPNB1-210ENST00000580573 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
KPNB1-210ENST00000580573 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
KPNB1-210ENST00000580573 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
KPNB1-210ENST00000580573 V9GYY9 64 aa3.84□□□□□ -1.79
KPNB1-210ENST00000580573 MT1HP80294 61 aa3.82□□□□□ -1.8
KPNB1-210ENST00000580573 CSAG1Q6PB30 78 aa3.82□□□□□ -1.8
KPNB1-210ENST00000580573 H0YAA0 97 aa3.81□□□□□ -1.8
KPNB1-210ENST00000580573 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
KPNB1-210ENST00000580573 Q5VV11 94 aa3.76□□□□□ -1.81
KPNB1-210ENST00000580573 A0A1B0GU69 56 aa3.75□□□□□ -1.81
KPNB1-210ENST00000580573 PRR15LQ9BU68 103 aa3.74□□□□□ -1.81
KPNB1-210ENST00000580573 PSPHP1O15172 72 aa3.72□□□□□ -1.81
KPNB1-210ENST00000580573 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
KPNB1-210ENST00000580573 P0C880 135 aa3.71□□□□□ -1.82
KPNB1-210ENST00000580573 SEC61GP60059 68 aa3.71□□□□□ -1.82
KPNB1-210ENST00000580573 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
KPNB1-210ENST00000580573 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
KPNB1-210ENST00000580573 M0R2T5 61 aa3.67□□□□□ -1.82
KPNB1-210ENST00000580573 MT2AP02795 61 aa3.67□□□□□ -1.82
KPNB1-210ENST00000580573 MT3P25713 68 aa3.67□□□□□ -1.82
KPNB1-210ENST00000580573 A0A1B0GU33 70 aa3.66□□□□□ -1.82
KPNB1-210ENST00000580573 UQCR11O14957 56 aa3.65□□□□□ -1.83
KPNB1-210ENST00000580573 MT1FP04733 61 aa3.64□□□□□ -1.83
KPNB1-210ENST00000580573 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
KPNB1-210ENST00000580573 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
KPNB1-210ENST00000580573 M0QZ58 72 aa3.63□□□□□ -1.83
KPNB1-210ENST00000580573 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
KPNB1-210ENST00000580573 A6NED7 52 aa3.61□□□□□ -1.83
KPNB1-210ENST00000580573 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
KPNB1-210ENST00000580573 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
KPNB1-210ENST00000580573 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
KPNB1-210ENST00000580573 R4GN34 69 aa3.58□□□□□ -1.84
KPNB1-210ENST00000580573 KRTAP10-10P60014 251 aa3.56□□□□□ -1.84
KPNB1-210ENST00000580573 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
KPNB1-210ENST00000580573 A6NN06 94 aa3.55□□□□□ -1.84
KPNB1-210ENST00000580573 A8MU10 97 aa3.55□□□□□ -1.84
KPNB1-210ENST00000580573 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
KPNB1-210ENST00000580573 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
KPNB1-210ENST00000580573 KRTAP19-8Q3LI54 63 aa3.52□□□□□ -1.85
KPNB1-210ENST00000580573 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
KPNB1-210ENST00000580573 KRTAP12-1P59990 96 aa3.5□□□□□ -1.85
KPNB1-210ENST00000580573 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
KPNB1-210ENST00000580573 A0A0D9SG42 100 aa3.47□□□□□ -1.85
KPNB1-210ENST00000580573 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
KPNB1-210ENST00000580573 MT1BP07438 61 aa3.45□□□□□ -1.86
KPNB1-210ENST00000580573 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
KPNB1-210ENST00000580573 K7ERS5 55 aa3.4□□□□□ -1.87
KPNB1-210ENST00000580573 SPINT4Q6UDR6 99 aa3.39□□□□□ -1.87
KPNB1-210ENST00000580573 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
KPNB1-210ENST00000580573 USH2AO75445 5202 aa3.34□□□□□ -1.87
KPNB1-210ENST00000580573 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
KPNB1-210ENST00000580573 MT1XP80297 61 aa3.33□□□□□ -1.88
KPNB1-210ENST00000580573 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
KPNB1-210ENST00000580573 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
KPNB1-210ENST00000580573 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
KPNB1-210ENST00000580573 ROMO1P60602 79 aa3.3□□□□□ -1.88
KPNB1-210ENST00000580573 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
KPNB1-210ENST00000580573 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
KPNB1-210ENST00000580573 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
KPNB1-210ENST00000580573 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms