RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
RFFL-207ENST00000580569 NDUFS5O43920 106 aa4.36□□□□□ -1.71
RFFL-207ENST00000580569 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
RFFL-207ENST00000580569 FP248Q71RG6 208 aaPredicted RBP4.34□□□□□ -1.71
RFFL-207ENST00000580569 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
RFFL-207ENST00000580569 LOC101927531A0A1B0GV80 90 aa4.32□□□□□ -1.72
RFFL-207ENST00000580569 PRR4Q16378 134 aa4.31□□□□□ -1.72
RFFL-207ENST00000580569 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
RFFL-207ENST00000580569 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
RFFL-207ENST00000580569 A8MUU9 505 aa4.28□□□□□ -1.72
RFFL-207ENST00000580569 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
RFFL-207ENST00000580569 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
RFFL-207ENST00000580569 C4orf26Q17RF5 130 aa4.27□□□□□ -1.73
RFFL-207ENST00000580569 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
RFFL-207ENST00000580569 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
RFFL-207ENST00000580569 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
RFFL-207ENST00000580569 HRES1P13985 223 aa4.25□□□□□ -1.73
RFFL-207ENST00000580569 RETNLBQ9BQ08 111 aa4.25□□□□□ -1.73
RFFL-207ENST00000580569 Q1T7F1 81 aa4.23□□□□□ -1.73
RFFL-207ENST00000580569 COA5Q86WW8 74 aa4.23□□□□□ -1.73
RFFL-207ENST00000580569 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
RFFL-207ENST00000580569 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
RFFL-207ENST00000580569 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
RFFL-207ENST00000580569 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
RFFL-207ENST00000580569 ACYP2P14621 99 aa4.17□□□□□ -1.74
RFFL-207ENST00000580569 V9GYY9 64 aa4.15□□□□□ -1.75
RFFL-207ENST00000580569 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
RFFL-207ENST00000580569 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
RFFL-207ENST00000580569 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
RFFL-207ENST00000580569 SPINK7P58062 85 aa4.12□□□□□ -1.75
RFFL-207ENST00000580569 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
RFFL-207ENST00000580569 Q5VV11 94 aa4.12□□□□□ -1.75
RFFL-207ENST00000580569 A8MUN3 132 aa4.11□□□□□ -1.75
RFFL-207ENST00000580569 PSPHP1O15172 72 aa4.1□□□□□ -1.75
RFFL-207ENST00000580569 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
RFFL-207ENST00000580569 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
RFFL-207ENST00000580569 CHKB-CPT1BH3BT56 60 aa4.05□□□□□ -1.76
RFFL-207ENST00000580569 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
RFFL-207ENST00000580569 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
RFFL-207ENST00000580569 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
RFFL-207ENST00000580569 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
RFFL-207ENST00000580569 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
RFFL-207ENST00000580569 LCE1DQ5T752 114 aa4□□□□□ -1.77
RFFL-207ENST00000580569 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
RFFL-207ENST00000580569 BRK1Q8WUW1 75 aa4□□□□□ -1.77
RFFL-207ENST00000580569 A8MU10 97 aa3.99□□□□□ -1.77
RFFL-207ENST00000580569 LCA10Q71F78 164 aa3.99□□□□□ -1.77
RFFL-207ENST00000580569 A0A1B0GU69 56 aa3.96□□□□□ -1.78
RFFL-207ENST00000580569 MT1HP80294 61 aa3.96□□□□□ -1.78
RFFL-207ENST00000580569 KRTAP19-2Q3LHN2 52 aa3.96□□□□□ -1.78
RFFL-207ENST00000580569 A6NED7 52 aa3.95□□□□□ -1.78
RFFL-207ENST00000580569 SPTSSBQ8NFR3 76 aa3.95□□□□□ -1.78
RFFL-207ENST00000580569 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
RFFL-207ENST00000580569 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
RFFL-207ENST00000580569 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
RFFL-207ENST00000580569 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
RFFL-207ENST00000580569 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
RFFL-207ENST00000580569 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
RFFL-207ENST00000580569 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.79
RFFL-207ENST00000580569 USH2AO75445 5202 aa3.88□□□□□ -1.79
RFFL-207ENST00000580569 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
RFFL-207ENST00000580569 S4R3F8 94 aa3.88□□□□□ -1.79
RFFL-207ENST00000580569 UQCR11O14957 56 aa3.87□□□□□ -1.79
RFFL-207ENST00000580569 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
RFFL-207ENST00000580569 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
RFFL-207ENST00000580569 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
RFFL-207ENST00000580569 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
RFFL-207ENST00000580569 A6NN06 94 aa3.83□□□□□ -1.8
RFFL-207ENST00000580569 H0YAA0 97 aa3.83□□□□□ -1.8
RFFL-207ENST00000580569 A0A1B0GU33 70 aa3.82□□□□□ -1.8
RFFL-207ENST00000580569 M0R2T5 61 aa3.81□□□□□ -1.8
RFFL-207ENST00000580569 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
RFFL-207ENST00000580569 MT3P25713 68 aa3.79□□□□□ -1.8
RFFL-207ENST00000580569 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
RFFL-207ENST00000580569 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
RFFL-207ENST00000580569 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
RFFL-207ENST00000580569 P0C880 135 aa3.77□□□□□ -1.81
RFFL-207ENST00000580569 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
RFFL-207ENST00000580569 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
RFFL-207ENST00000580569 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
RFFL-207ENST00000580569 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
RFFL-207ENST00000580569 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
RFFL-207ENST00000580569 M0QZ58 72 aa3.66□□□□□ -1.82
RFFL-207ENST00000580569 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
RFFL-207ENST00000580569 KRTAP12-1P59990 96 aa3.62□□□□□ -1.83
RFFL-207ENST00000580569 A0A0D9SG42 100 aa3.61□□□□□ -1.83
RFFL-207ENST00000580569 MT2AP02795 61 aa3.6□□□□□ -1.83
RFFL-207ENST00000580569 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
RFFL-207ENST00000580569 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
RFFL-207ENST00000580569 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
RFFL-207ENST00000580569 K7ERS5 55 aa3.58□□□□□ -1.84
RFFL-207ENST00000580569 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
RFFL-207ENST00000580569 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
RFFL-207ENST00000580569 MT1FP04733 61 aa3.57□□□□□ -1.84
RFFL-207ENST00000580569 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
RFFL-207ENST00000580569 NEBP20929 6669 aa3.56□□□□□ -1.84
RFFL-207ENST00000580569 R4GN34 69 aa3.55□□□□□ -1.84
RFFL-207ENST00000580569 ROMO1P60602 79 aa3.53□□□□□ -1.84
RFFL-207ENST00000580569 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
RFFL-207ENST00000580569 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms