RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 C5orf47Q569G3 176 aa6.34□□□□□ -1.39
GGA3-208ENST00000579743 CSAG1Q6PB30 78 aa6.33□□□□□ -1.4
GGA3-208ENST00000579743 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
GGA3-208ENST00000579743 S4R3F8 94 aa6.32□□□□□ -1.4
GGA3-208ENST00000579743 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
GGA3-208ENST00000579743 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
GGA3-208ENST00000579743 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
GGA3-208ENST00000579743 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
GGA3-208ENST00000579743 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
GGA3-208ENST00000579743 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
GGA3-208ENST00000579743 Q5VV11 94 aa6.25□□□□□ -1.41
GGA3-208ENST00000579743 A6NN06 94 aa6.24□□□□□ -1.41
GGA3-208ENST00000579743 LCA10Q71F78 164 aa6.23□□□□□ -1.41
GGA3-208ENST00000579743 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
GGA3-208ENST00000579743 TMEM258P61165 79 aa6.21□□□□□ -1.42
GGA3-208ENST00000579743 H7BZZ5 65 aa6.2□□□□□ -1.42
GGA3-208ENST00000579743 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
GGA3-208ENST00000579743 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
GGA3-208ENST00000579743 NDUFC1O43677 76 aa6.17□□□□□ -1.42
GGA3-208ENST00000579743 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.42
GGA3-208ENST00000579743 H0Y9P7 68 aa6.15□□□□□ -1.42
GGA3-208ENST00000579743 H3BPC8 53 aa6.15□□□□□ -1.42
GGA3-208ENST00000579743 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
GGA3-208ENST00000579743 CYP4F30PQ9H0H9 118 aa6.14□□□□□ -1.43
GGA3-208ENST00000579743 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
GGA3-208ENST00000579743 LOC101927531A0A1B0GV80 90 aa6.13□□□□□ -1.43
GGA3-208ENST00000579743 MT1BP07438 61 aa6.13□□□□□ -1.43
GGA3-208ENST00000579743 MP68P56378 58 aa6.13□□□□□ -1.43
GGA3-208ENST00000579743 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
GGA3-208ENST00000579743 LINC00208Q96KT6 92 aa6.09□□□□□ -1.43
GGA3-208ENST00000579743 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
GGA3-208ENST00000579743 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
GGA3-208ENST00000579743 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
GGA3-208ENST00000579743 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
GGA3-208ENST00000579743 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
GGA3-208ENST00000579743 A8MUN3 132 aa5.99□□□□□ -1.45
GGA3-208ENST00000579743 H0YAA0 97 aa5.99□□□□□ -1.45
GGA3-208ENST00000579743 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
GGA3-208ENST00000579743 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
GGA3-208ENST00000579743 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
GGA3-208ENST00000579743 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
GGA3-208ENST00000579743 NEBP20929 6669 aa5.92□□□□□ -1.46
GGA3-208ENST00000579743 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
GGA3-208ENST00000579743 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
GGA3-208ENST00000579743 R4GN34 69 aa5.84□□□□□ -1.47
GGA3-208ENST00000579743 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
GGA3-208ENST00000579743 SMIM26A0A096LP01 95 aa5.83□□□□□ -1.48
GGA3-208ENST00000579743 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
GGA3-208ENST00000579743 COA5Q86WW8 74 aa5.82□□□□□ -1.48
GGA3-208ENST00000579743 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
GGA3-208ENST00000579743 M0QZ58 72 aa5.74□□□□□ -1.49
GGA3-208ENST00000579743 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
GGA3-208ENST00000579743 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
GGA3-208ENST00000579743 KMT2DO14686 5537 aa5.73□□□□□ -1.49
GGA3-208ENST00000579743 ACYP2P14621 99 aa5.73□□□□□ -1.49
GGA3-208ENST00000579743 MT1XP80297 61 aa5.72□□□□□ -1.49
GGA3-208ENST00000579743 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
GGA3-208ENST00000579743 SPRR2EP22531 72 aa5.71□□□□□ -1.5
GGA3-208ENST00000579743 SPRR2BP35325 72 aa5.71□□□□□ -1.5
GGA3-208ENST00000579743 SPRR2AP35326 72 aa5.71□□□□□ -1.5
GGA3-208ENST00000579743 P0C880 135 aa5.7□□□□□ -1.5
GGA3-208ENST00000579743 Q1T7F1 81 aa5.7□□□□□ -1.5
GGA3-208ENST00000579743 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
GGA3-208ENST00000579743 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
GGA3-208ENST00000579743 V9GYY9 64 aa5.67□□□□□ -1.5
GGA3-208ENST00000579743 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
GGA3-208ENST00000579743 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
GGA3-208ENST00000579743 MDN1Q9NU22 5596 aa5.64□□□□□ -1.51
GGA3-208ENST00000579743 LINC01558Q9Y6Z2 57 aa5.61□□□□□ -1.51
GGA3-208ENST00000579743 KRTAP3-2Q9BYR7 98 aa5.58□□□□□ -1.52
GGA3-208ENST00000579743 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
GGA3-208ENST00000579743 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
GGA3-208ENST00000579743 PSPHP1O15172 72 aa5.56□□□□□ -1.52
GGA3-208ENST00000579743 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
GGA3-208ENST00000579743 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
GGA3-208ENST00000579743 SPRR2DP22532 72 aa5.53□□□□□ -1.52
GGA3-208ENST00000579743 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
GGA3-208ENST00000579743 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
GGA3-208ENST00000579743 A0A1B0GU69 56 aa5.46□□□□□ -1.54
GGA3-208ENST00000579743 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
GGA3-208ENST00000579743 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
GGA3-208ENST00000579743 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
GGA3-208ENST00000579743 A6NED7 52 aa5.4□□□□□ -1.54
GGA3-208ENST00000579743 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
GGA3-208ENST00000579743 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
GGA3-208ENST00000579743 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
GGA3-208ENST00000579743 SEC61GP60059 68 aa5.36□□□□□ -1.55
GGA3-208ENST00000579743 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
GGA3-208ENST00000579743 A8MU10 97 aa5.33□□□□□ -1.56
GGA3-208ENST00000579743 UQCR11O14957 56 aa5.31□□□□□ -1.56
GGA3-208ENST00000579743 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
GGA3-208ENST00000579743 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
GGA3-208ENST00000579743 A0A1B0GU33 70 aa5.25□□□□□ -1.57
GGA3-208ENST00000579743 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
GGA3-208ENST00000579743 A0A0D9SG42 100 aa5.16□□□□□ -1.58
GGA3-208ENST00000579743 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
GGA3-208ENST00000579743 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
GGA3-208ENST00000579743 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
GGA3-208ENST00000579743 MT1EP04732 61 aa5.1□□□□□ -1.59
GGA3-208ENST00000579743 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms