RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 Q5VV11 94 aa4.82□□□□□ -1.64
PPP4R1-213ENST00000579609 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
PPP4R1-213ENST00000579609 SPTSSBQ8NFR3 76 aa4.8□□□□□ -1.64
PPP4R1-213ENST00000579609 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
PPP4R1-213ENST00000579609 FLG2Q5D862 2391 aaPredicted RBP4.79□□□□□ -1.64
PPP4R1-213ENST00000579609 PSPHP1O15172 72 aa4.79□□□□□ -1.64
PPP4R1-213ENST00000579609 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
PPP4R1-213ENST00000579609 RETNLBQ9BQ08 111 aa4.78□□□□□ -1.64
PPP4R1-213ENST00000579609 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
PPP4R1-213ENST00000579609 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
PPP4R1-213ENST00000579609 FAT1Q14517 4588 aa4.75□□□□□ -1.65
PPP4R1-213ENST00000579609 C9orf92A6NGG3 77 aa4.75□□□□□ -1.65
PPP4R1-213ENST00000579609 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-213ENST00000579609 CDC42SE1Q9NRR8 79 aa4.74□□□□□ -1.65
PPP4R1-213ENST00000579609 SPINK7P58062 85 aa4.73□□□□□ -1.65
PPP4R1-213ENST00000579609 ATP11AUNQ6ZP68 121 aa4.73□□□□□ -1.65
PPP4R1-213ENST00000579609 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
PPP4R1-213ENST00000579609 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
PPP4R1-213ENST00000579609 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
PPP4R1-213ENST00000579609 A6NED7 52 aa4.71□□□□□ -1.66
PPP4R1-213ENST00000579609 MT1HL1P0DM35 61 aa4.71□□□□□ -1.66
PPP4R1-213ENST00000579609 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
PPP4R1-213ENST00000579609 A0A1B0GU69 56 aa4.7□□□□□ -1.66
PPP4R1-213ENST00000579609 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
PPP4R1-213ENST00000579609 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
PPP4R1-213ENST00000579609 HSPG2P98160 4391 aa4.68□□□□□ -1.66
PPP4R1-213ENST00000579609 SEC61GP60059 68 aa4.67□□□□□ -1.66
PPP4R1-213ENST00000579609 TNXBP22105 4242 aa4.67□□□□□ -1.66
PPP4R1-213ENST00000579609 FAT3Q8TDW7 4589 aa4.66□□□□□ -1.66
PPP4R1-213ENST00000579609 HERC1Q15751 4861 aa4.65□□□□□ -1.67
PPP4R1-213ENST00000579609 UQCR11O14957 56 aa4.65□□□□□ -1.67
PPP4R1-213ENST00000579609 LCA10Q71F78 164 aa4.64□□□□□ -1.67
PPP4R1-213ENST00000579609 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
PPP4R1-213ENST00000579609 SEC61BP60468 96 aaKnown RBP4.57□□□□□ -1.68
PPP4R1-213ENST00000579609 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
PPP4R1-213ENST00000579609 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
PPP4R1-213ENST00000579609 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
PPP4R1-213ENST00000579609 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
PPP4R1-213ENST00000579609 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
PPP4R1-213ENST00000579609 A6NN06 94 aa4.54□□□□□ -1.68
PPP4R1-213ENST00000579609 A8MU10 97 aa4.51□□□□□ -1.69
PPP4R1-213ENST00000579609 H1FX-AS1Q4G0G2 97 aa4.51□□□□□ -1.69
PPP4R1-213ENST00000579609 RBM12B-AS1Q9P1G2 102 aa4.51□□□□□ -1.69
PPP4R1-213ENST00000579609 S4R3F8 94 aa4.51□□□□□ -1.69
PPP4R1-213ENST00000579609 A0A1B0GU33 70 aa4.5□□□□□ -1.69
PPP4R1-213ENST00000579609 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
PPP4R1-213ENST00000579609 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
PPP4R1-213ENST00000579609 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
PPP4R1-213ENST00000579609 UBR4Q5T4S7 5183 aa4.46□□□□□ -1.7
PPP4R1-213ENST00000579609 H0YAA0 97 aa4.44□□□□□ -1.7
PPP4R1-213ENST00000579609 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
PPP4R1-213ENST00000579609 K7ERS5 55 aa4.4□□□□□ -1.71
PPP4R1-213ENST00000579609 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
PPP4R1-213ENST00000579609 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
PPP4R1-213ENST00000579609 M0QZ58 72 aa4.34□□□□□ -1.71
PPP4R1-213ENST00000579609 MUC17Q685J3 4493 aa4.3□□□□□ -1.72
PPP4R1-213ENST00000579609 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
PPP4R1-213ENST00000579609 ADM2Q7Z4H4 148 aa4.29□□□□□ -1.72
PPP4R1-213ENST00000579609 LRP2P98164 4655 aa4.28□□□□□ -1.72
PPP4R1-213ENST00000579609 P0C880 135 aa4.27□□□□□ -1.73
PPP4R1-213ENST00000579609 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
PPP4R1-213ENST00000579609 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
PPP4R1-213ENST00000579609 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
PPP4R1-213ENST00000579609 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
PPP4R1-213ENST00000579609 ROMO1P60602 79 aa4.2□□□□□ -1.74
PPP4R1-213ENST00000579609 CRIPTQ9P021 101 aa4.19□□□□□ -1.74
PPP4R1-213ENST00000579609 LPAP08519 4548 aa4.18□□□□□ -1.74
PPP4R1-213ENST00000579609 R4GN34 69 aa4.17□□□□□ -1.74
PPP4R1-213ENST00000579609 A0A0D9SG42 100 aa4.15□□□□□ -1.75
PPP4R1-213ENST00000579609 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
PPP4R1-213ENST00000579609 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
PPP4R1-213ENST00000579609 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
PPP4R1-213ENST00000579609 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
PPP4R1-213ENST00000579609 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
PPP4R1-213ENST00000579609 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
PPP4R1-213ENST00000579609 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
PPP4R1-213ENST00000579609 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
PPP4R1-213ENST00000579609 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
PPP4R1-213ENST00000579609 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
PPP4R1-213ENST00000579609 MUC2Q02817 5179 aa3.94□□□□□ -1.78
PPP4R1-213ENST00000579609 MT1HP80294 61 aa3.93□□□□□ -1.78
PPP4R1-213ENST00000579609 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
PPP4R1-213ENST00000579609 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
PPP4R1-213ENST00000579609 M0R2T5 61 aa3.89□□□□□ -1.79
PPP4R1-213ENST00000579609 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
PPP4R1-213ENST00000579609 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
PPP4R1-213ENST00000579609 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
PPP4R1-213ENST00000579609 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.79
PPP4R1-213ENST00000579609 MT2AP02795 61 aa3.83□□□□□ -1.8
PPP4R1-213ENST00000579609 TNP1P09430 55 aa3.82□□□□□ -1.8
PPP4R1-213ENST00000579609 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
PPP4R1-213ENST00000579609 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
PPP4R1-213ENST00000579609 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
PPP4R1-213ENST00000579609 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
PPP4R1-213ENST00000579609 MT1FP04733 61 aa3.79□□□□□ -1.8
PPP4R1-213ENST00000579609 MT3P25713 68 aa3.77□□□□□ -1.81
PPP4R1-213ENST00000579609 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
PPP4R1-213ENST00000579609 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
PPP4R1-213ENST00000579609 MT1BP07438 61 aa3.67□□□□□ -1.82
PPP4R1-213ENST00000579609 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms