RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 V9GYY9 64 aa11.45□□□□□ -0.58
LIMD2-205ENST00000578402 S4R3F8 94 aa11.4□□□□□ -0.59
LIMD2-205ENST00000578402 LCA10Q71F78 164 aa11.35□□□□□ -0.59
LIMD2-205ENST00000578402 LINC01558Q9Y6Z2 57 aa11.35□□□□□ -0.59
LIMD2-205ENST00000578402 KRTAP19-2Q3LHN2 52 aa11.33□□□□□ -0.6
LIMD2-205ENST00000578402 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
LIMD2-205ENST00000578402 MUC2Q02817 5179 aa11.25□□□□□ -0.61
LIMD2-205ENST00000578402 KRTAP9-2Q9BYQ4 174 aa11.24□□□□□ -0.61
LIMD2-205ENST00000578402 PRR15LQ9BU68 103 aa11.2□□□□□ -0.62
LIMD2-205ENST00000578402 PSPHP1O15172 72 aa11.18□□□□□ -0.62
LIMD2-205ENST00000578402 A0A1B0GU69 56 aa11.16□□□□□ -0.62
LIMD2-205ENST00000578402 CSAG1Q6PB30 78 aa11.16□□□□□ -0.62
LIMD2-205ENST00000578402 SEC61GP60059 68 aa11.13□□□□□ -0.63
LIMD2-205ENST00000578402 Q5VV11 94 aa11.12□□□□□ -0.63
LIMD2-205ENST00000578402 FLGP20930 4061 aaPredicted RBP11.07□□□□□ -0.64
LIMD2-205ENST00000578402 LCE2CQ5TA81 110 aa11.06□□□□□ -0.64
LIMD2-205ENST00000578402 LCE2AQ5TA79 106 aaPredicted RBP11.04□□□□□ -0.64
LIMD2-205ENST00000578402 FAT4Q6V0I7 4981 aa11.03□□□□□ -0.64
LIMD2-205ENST00000578402 KRTAP9-6A0A140TA67 174 aa11.03□□□□□ -0.64
LIMD2-205ENST00000578402 H0YAA0 97 aa10.97□□□□□ -0.65
LIMD2-205ENST00000578402 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
LIMD2-205ENST00000578402 KRTAP10-6P60371 365 aaPredicted RBP10.89□□□□□ -0.67
LIMD2-205ENST00000578402 A6NED7 52 aa10.87□□□□□ -0.67
LIMD2-205ENST00000578402 ADM2Q7Z4H4 148 aa10.87□□□□□ -0.67
LIMD2-205ENST00000578402 UQCR11O14957 56 aa10.84□□□□□ -0.67
LIMD2-205ENST00000578402 MT1HP80294 61 aa10.84□□□□□ -0.67
LIMD2-205ENST00000578402 A0A1B0GU33 70 aa10.84□□□□□ -0.67
LIMD2-205ENST00000578402 P0C880 135 aa10.79□□□□□ -0.68
LIMD2-205ENST00000578402 BRK1Q8WUW1 75 aa10.73□□□□□ -0.69
LIMD2-205ENST00000578402 M0R2T5 61 aa10.72□□□□□ -0.69
LIMD2-205ENST00000578402 CDC42SE1Q9NRR8 79 aa10.71□□□□□ -0.69
LIMD2-205ENST00000578402 MIR22HGQ0VDD5 57 aa10.7□□□□□ -0.7
LIMD2-205ENST00000578402 SPATA8Q6RVD6 105 aa10.7□□□□□ -0.7
LIMD2-205ENST00000578402 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
LIMD2-205ENST00000578402 M0QZ58 72 aa10.6□□□□□ -0.71
LIMD2-205ENST00000578402 KRTAP13-4Q3LI77 160 aa10.57□□□□□ -0.72
LIMD2-205ENST00000578402 A8MU10 97 aa10.55□□□□□ -0.72
LIMD2-205ENST00000578402 CRCT1Q9UGL9 99 aa10.53□□□□□ -0.72
LIMD2-205ENST00000578402 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
LIMD2-205ENST00000578402 CRIPTQ9P021 101 aa10.51□□□□□ -0.73
LIMD2-205ENST00000578402 R4GN34 69 aa10.51□□□□□ -0.73
LIMD2-205ENST00000578402 FSIP2Q5CZC0 6907 aa10.49□□□□□ -0.73
LIMD2-205ENST00000578402 LORP23490 312 aaPredicted RBP10.48□□□□□ -0.73
LIMD2-205ENST00000578402 KRTAP9-8Q9BYQ0 159 aa10.44□□□□□ -0.74
LIMD2-205ENST00000578402 MT2AP02795 61 aa10.42□□□□□ -0.74
LIMD2-205ENST00000578402 A0A0D9SG42 100 aa10.35□□□□□ -0.75
LIMD2-205ENST00000578402 MT1FP04733 61 aa10.34□□□□□ -0.75
LIMD2-205ENST00000578402 KRTAP10-10P60014 251 aa10.32□□□□□ -0.76
LIMD2-205ENST00000578402 K7ERS5 55 aa10.26□□□□□ -0.77
LIMD2-205ENST00000578402 LINC01554Q52M75 96 aa10.24□□□□□ -0.77
LIMD2-205ENST00000578402 SPRR2GQ9BYE4 73 aa10.24□□□□□ -0.77
LIMD2-205ENST00000578402 A6NN06 94 aa10.2□□□□□ -0.78
LIMD2-205ENST00000578402 KRTAP12-1P59990 96 aa10.2□□□□□ -0.78
LIMD2-205ENST00000578402 KRTAP19-1Q8IUB9 90 aa10.17□□□□□ -0.78
LIMD2-205ENST00000578402 PMAIP1Q13794 54 aa10.15□□□□□ -0.78
LIMD2-205ENST00000578402 KRTAP12-2P59991 146 aa10.14□□□□□ -0.79
LIMD2-205ENST00000578402 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
LIMD2-205ENST00000578402 KRTAP9-3Q9BYQ3 159 aa10.07□□□□□ -0.8
LIMD2-205ENST00000578402 KRTAP19-8Q3LI54 63 aa9.98□□□□□ -0.81
LIMD2-205ENST00000578402 PLAC4Q8WY50 150 aa9.89□□□□□ -0.83
LIMD2-205ENST00000578402 KRTAP9-7A8MTY7 169 aa9.87□□□□□ -0.83
LIMD2-205ENST00000578402 CAMK2N1Q7Z7J9 78 aa9.83□□□□□ -0.84
LIMD2-205ENST00000578402 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.82□□□□□ -0.84
LIMD2-205ENST00000578402 MT1BP07438 61 aa9.81□□□□□ -0.84
LIMD2-205ENST00000578402 ROMO1P60602 79 aa9.81□□□□□ -0.84
LIMD2-205ENST00000578402 LCE2BO14633 110 aa9.77□□□□□ -0.85
LIMD2-205ENST00000578402 KTN1-AS1Q86SY8 53 aa9.76□□□□□ -0.85
LIMD2-205ENST00000578402 USH2AO75445 5202 aa9.66□□□□□ -0.86
LIMD2-205ENST00000578402 SSPOA2VEC9 5147 aa9.66□□□□□ -0.86
LIMD2-205ENST00000578402 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
LIMD2-205ENST00000578402 SVIPQ8NHG7 77 aa9.57□□□□□ -0.88
LIMD2-205ENST00000578402 FCGBPQ9Y6R7 5405 aaPredicted RBP9.54□□□□□ -0.88
LIMD2-205ENST00000578402 MT1XP80297 61 aa9.49□□□□□ -0.89
LIMD2-205ENST00000578402 KRTAP10-5P60370 271 aa9.46□□□□□ -0.89
LIMD2-205ENST00000578402 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
LIMD2-205ENST00000578402 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
LIMD2-205ENST00000578402 PRO2289Q9P1D8 64 aa9.44□□□□□ -0.9
LIMD2-205ENST00000578402 TNP1P09430 55 aa9.38□□□□□ -0.91
LIMD2-205ENST00000578402 MACF1Q9UPN3 7388 aaKnown RBP9.3□□□□□ -0.92
LIMD2-205ENST00000578402 SYNE2Q8WXH0 6885 aaKnown RBP9.27□□□□□ -0.93
LIMD2-205ENST00000578402 KRTAP19-6Q3LI70 58 aa9.23□□□□□ -0.93
LIMD2-205ENST00000578402 KRTAP23-1A1A580 65 aa9.17□□□□□ -0.94
LIMD2-205ENST00000578402 PP632Q6XCG6 107 aa9.15□□□□□ -0.94
LIMD2-205ENST00000578402 KRTAP10-7P60409 375 aaPredicted RBP9.08□□□□□ -0.96
LIMD2-205ENST00000578402 KRTAP6-3Q3LI67 103 aa9.03□□□□□ -0.96
LIMD2-205ENST00000578402 KRTAP10-12P60413 245 aa9.02□□□□□ -0.97
LIMD2-205ENST00000578402 LCE3AQ5TA76 89 aa8.95□□□□□ -0.98
LIMD2-205ENST00000578402 KRTAP8-1Q8IUC2 63 aa8.82□□□□□ -1
LIMD2-205ENST00000578402 NEBP20929 6669 aa8.8□□□□□ -1
LIMD2-205ENST00000578402 KRTAP4-8A0A0G2JLE6 195 aa8.69□□□□□ -1.02
LIMD2-205ENST00000578402 KRTAP4-8Q9BYQ9 185 aa8.69□□□□□ -1.02
LIMD2-205ENST00000578402 MUC12Q9UKN1 5478 aa8.63□□□□□ -1.03
LIMD2-205ENST00000578402 KRTAP12-3P60328 96 aa8.61□□□□□ -1.03
LIMD2-205ENST00000578402 KMT2DO14686 5537 aa8.6□□□□□ -1.03
LIMD2-205ENST00000578402 KRTAP20-1Q3LI63 56 aa8.59□□□□□ -1.03
LIMD2-205ENST00000578402 KRTAP19-5Q3LI72 72 aa8.54□□□□□ -1.04
LIMD2-205ENST00000578402 KRTAP19-7Q3SYF9 63 aa8.47□□□□□ -1.05
LIMD2-205ENST00000578402 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
LIMD2-205ENST00000578402 KRTAP5-9P26371 169 aa8.39□□□□□ -1.07
LIMD2-205ENST00000578402 MDN1Q9NU22 5596 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms